RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 HINT2Q9BX68 163 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 MRPL20Q9BYC9 149 aaKnown RBP3.62□□□□□ -1.83
VPS29-212ENST00000621131 LPAR2Q9HBW0 351 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 PARP11Q9NR21 331 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 MMP26Q9NRE1 261 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 CYTL1Q9NRR1 136 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 UQCC1Q9NVA1 299 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 BET1LQ9NYM9 111 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 FBXO7Q9Y3I1 522 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 OR51B2Q9Y5P1 312 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 KPTNQ9Y664 436 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 MGAM2Q2M2H8 2515 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 IGHV3-16A0A0C4DH30 117 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 IGHV2-70DA0A0C4DH43 119 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 UBE2L5PA0A1B0GUS4 154 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 SMCO3A2RU48 225 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 RAB19A4D1S5 217 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 H0YJW9 148 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 BUB1B-PAK6H3BSN5 160 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 UPK2O00526 184 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 CYB5BO43169 146 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 FGF16O43320 207 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 LY6HO94772 140 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 IFNA1P01562 189 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 IFNA4P05014 189 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 OR9G9P0C7N8 305 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 METTL15P1P0C7V9 234 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 SAA1P0DJI8 122 aaPredicted RBP3.61□□□□□ -1.83
VPS29-212ENST00000621131 CT45A6P0DMU7 189 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 CT45A5P0DMU8 189 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 CT45A7P0DMV0 189 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 SPP1P10451 314 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 SLC25A16P16260 332 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 PRTN3P24158 256 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 NPY1RP25929 384 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 RPL8P62917 257 aaKnown RBP3.61□□□□□ -1.83
VPS29-212ENST00000621131 ERHP84090 104 aaKnown RBP3.61□□□□□ -1.83
VPS29-212ENST00000621131 SERF2P84101 59 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 PRCDQ00LT1 54 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 AANATQ16613 207 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 AARDQ4LEZ3 155 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 C9orf152Q5JTZ5 239 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 TPTE2P1Q5T6R2 138 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 MINOS1Q5TGZ0 78 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 TMEM14EPQ6UXP3 125 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 TMEM182Q6ZP80 229 aaPredicted RBP3.61□□□□□ -1.83
VPS29-212ENST00000621131 Q6ZRG5 221 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 RBPMS2Q6ZRY4 209 aaKnown RBP3.61□□□□□ -1.83
VPS29-212ENST00000621131 VMO1Q7Z5L0 202 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 ZNF525Q8N782 197 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 OR1L8Q8NGR8 309 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 FAM213BQ8TBF2 198 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 C22orf15Q8WYQ4 148 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 MARC2Q969Z3 335 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 NARS2Q96I59 477 aaKnown RBP3.61□□□□□ -1.83
VPS29-212ENST00000621131 CXorf58Q96LI9 332 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 NABP2Q9BQ15 211 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 PSMG3Q9BT73 122 aaPredicted RBP3.61□□□□□ -1.83
VPS29-212ENST00000621131 GGACTQ9BVM4 153 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 ARV1Q9H2C2 271 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 C11orf1Q9H5F2 150 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 TMEM14BQ9NUH8 114 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 CLEC5AQ9NY25 188 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 DPM3Q9P2X0 92 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 TBL2Q9Y4P3 447 aaKnown RBP3.61□□□□□ -1.83
VPS29-212ENST00000621131 TIMM9Q9Y5J7 89 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 AUP1Q9Y679 476 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 MINOS1-NBL1R4GNA1 71 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 AKAP6Q13023 2319 aa3.61□□□□□ -1.83
VPS29-212ENST00000621131 DSCAMO60469 2012 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 DSCAML1Q8TD84 2053 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 IGHV1-3A0A0C4DH29 117 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 MFSD2BA6NFX1 497 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 CORTO00230 105 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 SCGB2A1O75556 95 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 MT-CO2P00403 227 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 IGLV1-47P01700 117 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 ZP3P21754 424 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 FGF7P21781 194 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 ATP6V0CP27449 155 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 CD1BP29016 333 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 BRS3P32247 399 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 REG1BP48304 166 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 ARF6P62330 175 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 LCN2P80188 198 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 AKR1C1Q04828 323 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 PJVKQ0ZLH3 352 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 HES1Q14469 280 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 PEA15Q15121 130 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 LRRC75BQ2VPJ9 315 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 ACOT6Q3I5F7 207 aaPredicted RBP3.6□□□□□ -1.83
VPS29-212ENST00000621131 TMEM41BQ5BJD5 291 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 SPINK9Q5DT21 86 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 LEMD1Q68G75 181 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 ETFRF1Q6IPR1 90 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 VKORC1L1Q8N0U8 176 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 EIF4E3Q8N5X7 224 aaKnown RBP3.6□□□□□ -1.83
VPS29-212ENST00000621131 OR11H6Q8NGC7 330 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 OR2T10Q8NGZ9 312 aa3.6□□□□□ -1.83
VPS29-212ENST00000621131 CLDND2Q8NHS1 167 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms