RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 PSME4Q14997 1843 aa8.76□□□□□ -1.01
CLTCL1-209ENST00000617103 LOC285556D6RIA3 1793 aa8.76□□□□□ -1.01
CLTCL1-209ENST00000617103 SPINK8P0C7L1 97 aa8.76□□□□□ -1.01
CLTCL1-209ENST00000617103 ASCL4Q6XD76 172 aa8.76□□□□□ -1.01
CLTCL1-209ENST00000617103 MESP1Q9BRJ9 268 aa8.76□□□□□ -1.01
CLTCL1-209ENST00000617103 DOCK11Q5JSL3 2073 aa8.76□□□□□ -1.01
CLTCL1-209ENST00000617103 LINC00473A8K010 186 aa8.76□□□□□ -1.01
CLTCL1-209ENST00000617103 GHRHP01286 108 aa8.76□□□□□ -1.01
CLTCL1-209ENST00000617103 FOXG1P55316 489 aaPredicted RBP8.76□□□□□ -1.01
CLTCL1-209ENST00000617103 CENPVQ7Z7K6 275 aaPredicted RBP8.76□□□□□ -1.01
CLTCL1-209ENST00000617103 C18orf32Q8TCD1 76 aa8.76□□□□□ -1.01
CLTCL1-209ENST00000617103 SCRT1Q9BWW7 348 aa8.76□□□□□ -1.01
CLTCL1-209ENST00000617103 NRXN2Q9P2S2 1712 aa8.76□□□□□ -1.01
CLTCL1-209ENST00000617103 LCTP09848 1927 aa8.76□□□□□ -1.01
CLTCL1-209ENST00000617103 IGHV3OR16-10A0A075B7F0 116 aa8.76□□□□□ -1.01
CLTCL1-209ENST00000617103 FNDC10F2Z333 226 aa8.76□□□□□ -1.01
CLTCL1-209ENST00000617103 TDGF1P13385 188 aa8.76□□□□□ -1.01
CLTCL1-209ENST00000617103 LINC01560Q8TB33 94 aa8.76□□□□□ -1.01
CLTCL1-209ENST00000617103 ZNF581Q9P0T4 197 aa8.76□□□□□ -1.01
CLTCL1-209ENST00000617103 SBF2Q86WG5 1849 aa8.76□□□□□ -1.01
CLTCL1-209ENST00000617103 CD28P10747 220 aa8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 PDLIM4P50479 330 aa8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 RHOGP84095 191 aa8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 TMEM155Q4W5P6 130 aa8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 TMEM167AQ8TBQ9 72 aa8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 NEU4Q8WWR8 484 aaPredicted RBP8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 MCRIP2Q9BUT9 160 aaKnown RBP8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 CHAC1Q9BUX1 264 aa8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 NPFFR1Q9GZQ6 430 aa8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 A0A1B0GWJ7 208 aa8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 FXYD7P58549 80 aa8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 IGKV2-40A0A087WW87 121 aaPredicted RBP8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 FAM231BA6NCW3 169 aa8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 IGKV2D-40P01614 121 aaPredicted RBP8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 YPEL3P61236 119 aaPredicted RBP8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 LHFPL4Q7Z7J7 247 aa8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 GGNQ86UU5 652 aa8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 GLMPQ8WWB7 406 aa8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 PGPEP1Q9NXJ5 209 aa8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 BRCA1P38398 1863 aaKnown RBP8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 CACNA1GO43497 2377 aa8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 IGKV3D-20A0A0C4DH25 116 aa8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 GGTLC3B5MD39 225 aa8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 TOMM40O96008 361 aa8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 TMEM249Q2WGJ8 235 aa8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 ANAPC10Q9UM13 185 aa8.75□□□□□ -1.01
CLTCL1-209ENST00000617103 DIDO1Q9BTC0 2240 aaKnown RBP8.74□□□□□ -1.01
CLTCL1-209ENST00000617103 Q6P435 159 aa8.74□□□□□ -1.01
CLTCL1-209ENST00000617103 PLEKHB2Q96CS7 222 aa8.74□□□□□ -1.01
CLTCL1-209ENST00000617103 SIPA1L1O43166 1804 aa8.74□□□□□ -1.01
CLTCL1-209ENST00000617103 OVOL1O14753 267 aa8.74□□□□□ -1.01
CLTCL1-209ENST00000617103 Q6ZWC4 215 aa8.74□□□□□ -1.01
CLTCL1-209ENST00000617103 GFRA4Q9GZZ7 299 aa8.74□□□□□ -1.01
CLTCL1-209ENST00000617103 CLPSP04118 112 aa8.74□□□□□ -1.01
CLTCL1-209ENST00000617103 LYPD1Q8N2G4 141 aa8.74□□□□□ -1.01
CLTCL1-209ENST00000617103 TMEM158Q8WZ71 300 aa8.74□□□□□ -1.01
CLTCL1-209ENST00000617103 IGHV1-18A0A0C4DH31 117 aa8.74□□□□□ -1.01
CLTCL1-209ENST00000617103 TIMM23O14925 209 aa8.74□□□□□ -1.01
CLTCL1-209ENST00000617103 IGHV3-11P01762 117 aa8.74□□□□□ -1.01
CLTCL1-209ENST00000617103 MORN3Q6PF18 240 aaPredicted RBP8.74□□□□□ -1.01
CLTCL1-209ENST00000617103 LINC01587Q99440 93 aa8.74□□□□□ -1.01
CLTCL1-209ENST00000617103 C11orf68Q9H3H3 251 aaKnown RBP8.74□□□□□ -1.01
CLTCL1-209ENST00000617103 MBNL3Q9NUK0 354 aaKnown RBP8.74□□□□□ -1.01
CLTCL1-209ENST00000617103 PLXNA1Q9UIW2 1896 aa8.73□□□□□ -1.01
CLTCL1-209ENST00000617103 CREBBPQ92793 2442 aa8.73□□□□□ -1.01
CLTCL1-209ENST00000617103 ATP5J2P56134 94 aa8.73□□□□□ -1.01
CLTCL1-209ENST00000617103 C2orf82Q6UX34 121 aa8.73□□□□□ -1.01
CLTCL1-209ENST00000617103 SPANXA1Q9NS26 97 aa8.73□□□□□ -1.01
CLTCL1-209ENST00000617103 LSM4Q9Y4Z0 139 aaKnown RBP8.73□□□□□ -1.01
CLTCL1-209ENST00000617103 MMP23AO75900 390 aa8.73□□□□□ -1.01
CLTCL1-209ENST00000617103 STPG4Q8N801 248 aa8.73□□□□□ -1.01
CLTCL1-209ENST00000617103 KLF2Q9Y5W3 355 aaPredicted RBP8.73□□□□□ -1.01
CLTCL1-209ENST00000617103 DOCK10Q96BY6 2186 aa8.73□□□□□ -1.01
CLTCL1-209ENST00000617103 FANCMQ8IYD8 2048 aa8.73□□□□□ -1.01
CLTCL1-209ENST00000617103 DOCK6Q96HP0 2047 aa8.73□□□□□ -1.01
CLTCL1-209ENST00000617103 IGHV3-64A0A075B6Q5 118 aa8.73□□□□□ -1.01
CLTCL1-209ENST00000617103 ZNF883P0CG24 379 aa8.73□□□□□ -1.01
CLTCL1-209ENST00000617103 SELLP14151 372 aa8.73□□□□□ -1.01
CLTCL1-209ENST00000617103 AMN1Q8IY45 258 aa8.73□□□□□ -1.01
CLTCL1-209ENST00000617103 CRIPAKQ8N1N5 446 aa8.73□□□□□ -1.01
CLTCL1-209ENST00000617103 LIME1Q9H400 295 aa8.73□□□□□ -1.01
CLTCL1-209ENST00000617103 SH2D1AO60880 128 aa8.72□□□□□ -1.01
CLTCL1-209ENST00000617103 DUSP14O95147 198 aaKnown RBP8.72□□□□□ -1.01
CLTCL1-209ENST00000617103 MYOD1P15172 320 aa8.72□□□□□ -1.01
CLTCL1-209ENST00000617103 CD24P25063 80 aa8.72□□□□□ -1.01
CLTCL1-209ENST00000617103 ZNF329Q86UD4 541 aa8.72□□□□□ -1.01
CLTCL1-209ENST00000617103 FAM57AQ8TBR7 257 aa8.72□□□□□ -1.01
CLTCL1-209ENST00000617103 LINC00479Q96M42 142 aa8.72□□□□□ -1.01
CLTCL1-209ENST00000617103 PINLYPA6NC86 204 aa8.72□□□□□ -1.01
CLTCL1-209ENST00000617103 IGHV1-46P01743 117 aa8.72□□□□□ -1.01
CLTCL1-209ENST00000617103 CD177Q8N6Q3 437 aa8.72□□□□□ -1.01
CLTCL1-209ENST00000617103 ITLN2Q8WWU7 325 aaPredicted RBP8.72□□□□□ -1.01
CLTCL1-209ENST00000617103 HEATR1Q9H583 2144 aaKnown RBP8.72□□□□□ -1.01
CLTCL1-209ENST00000617103 PAX9P55771 341 aa8.72□□□□□ -1.01
CLTCL1-209ENST00000617103 PRB3Q04118 309 aaPredicted RBP8.72□□□□□ -1.01
CLTCL1-209ENST00000617103 TMEM8BA6NDV4 472 aa8.72□□□□□ -1.01
CLTCL1-209ENST00000617103 C9orf118A6NHY6 69 aa8.72□□□□□ -1.01
CLTCL1-209ENST00000617103 CFHR1Q03591 330 aa8.72□□□□□ -1.01
CLTCL1-209ENST00000617103 CFAP161Q6P656 301 aa8.72□□□□□ -1.01
CLTCL1-209ENST00000617103 A0A0U1RRA0 63 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms