RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 GNB1LQ9BYB4 327 aa8.44□□□□□ -1.06
CTCFL-216ENST00000608263 GGTLC3B5MD39 225 aa8.44□□□□□ -1.06
CTCFL-216ENST00000608263 DIAPH2-AS1Q14236 149 aa8.44□□□□□ -1.06
CTCFL-216ENST00000608263 EXOC3-AS1Q8N2X6 119 aa8.44□□□□□ -1.06
CTCFL-216ENST00000608263 RNASEH2CQ8TDP1 164 aaKnown RBP8.44□□□□□ -1.06
CTCFL-216ENST00000608263 RCHY1Q96PM5 261 aa8.44□□□□□ -1.06
CTCFL-216ENST00000608263 NDFIP1Q9BT67 221 aa8.44□□□□□ -1.06
CTCFL-216ENST00000608263 MRPL32Q9BYC8 188 aaKnown RBP8.44□□□□□ -1.06
CTCFL-216ENST00000608263 A0A1W2PRE2 83 aa8.44□□□□□ -1.06
CTCFL-216ENST00000608263 LIPFP07098 398 aa8.44□□□□□ -1.06
CTCFL-216ENST00000608263 MC5RP33032 325 aa8.44□□□□□ -1.06
CTCFL-216ENST00000608263 TM4SF20Q53R12 229 aa8.44□□□□□ -1.06
CTCFL-216ENST00000608263 PARD6GQ9BYG4 376 aaPredicted RBP8.44□□□□□ -1.06
CTCFL-216ENST00000608263 Q9H3A6 140 aa8.44□□□□□ -1.06
CTCFL-216ENST00000608263 FOXA2Q9Y261 457 aaPredicted RBP8.44□□□□□ -1.06
CTCFL-216ENST00000608263 DLEU1O43261 78 aa8.43□□□□□ -1.06
CTCFL-216ENST00000608263 KLF17Q5JT82 389 aaPredicted RBP8.43□□□□□ -1.06
CTCFL-216ENST00000608263 GRAMD2BQ96HH9 432 aa8.43□□□□□ -1.06
CTCFL-216ENST00000608263 C18orf15Q96N68 181 aa8.43□□□□□ -1.06
CTCFL-216ENST00000608263 THYN1Q9P016 225 aa8.43□□□□□ -1.06
CTCFL-216ENST00000608263 F11RQ9Y624 299 aaKnown RBP8.43□□□□□ -1.06
CTCFL-216ENST00000608263 IGHV3-66A0A0C4DH42 116 aa8.43□□□□□ -1.06
CTCFL-216ENST00000608263 PMS2P5A8MQ11 134 aa8.43□□□□□ -1.06
CTCFL-216ENST00000608263 GRNP28799 593 aaKnown RBP8.43□□□□□ -1.06
CTCFL-216ENST00000608263 S100A7P31151 101 aa8.43□□□□□ -1.06
CTCFL-216ENST00000608263 BRWD1-AS2P59051 145 aa8.43□□□□□ -1.06
CTCFL-216ENST00000608263 CX3CL1P78423 397 aa8.43□□□□□ -1.06
CTCFL-216ENST00000608263 MAJINQ3KP22 176 aa8.43□□□□□ -1.06
CTCFL-216ENST00000608263 SLC25A34Q6PIV7 304 aa8.43□□□□□ -1.06
CTCFL-216ENST00000608263 LYPD2Q6UXB3 125 aa8.43□□□□□ -1.06
CTCFL-216ENST00000608263 BPIFA4PQ86YQ2 179 aa8.43□□□□□ -1.06
CTCFL-216ENST00000608263 CIARTQ8N365 385 aaPredicted RBP8.43□□□□□ -1.06
CTCFL-216ENST00000608263 TMEM186Q96B77 213 aa8.43□□□□□ -1.06
CTCFL-216ENST00000608263 GPR82Q96P67 336 aa8.43□□□□□ -1.06
CTCFL-216ENST00000608263 EPDR1Q9UM22 224 aa8.43□□□□□ -1.06
CTCFL-216ENST00000608263 C10orf142B7Z368 130 aa8.43□□□□□ -1.06
CTCFL-216ENST00000608263 CA7P43166 264 aa8.43□□□□□ -1.06
CTCFL-216ENST00000608263 NIT1Q86X76 327 aa8.43□□□□□ -1.06
CTCFL-216ENST00000608263 NUP35Q8NFH5 326 aa8.43□□□□□ -1.06
CTCFL-216ENST00000608263 C19orf24Q9BVV8 132 aa8.43□□□□□ -1.06
CTCFL-216ENST00000608263 LINC00312Q9Y6C7 94 aa8.43□□□□□ -1.06
CTCFL-216ENST00000608263 A0A1W2PS18 150 aa8.42□□□□□ -1.06
CTCFL-216ENST00000608263 hDV102S1A0JD36 115 aa8.42□□□□□ -1.06
CTCFL-216ENST00000608263 RNASE2P10153 161 aaKnown RBP8.42□□□□□ -1.06
CTCFL-216ENST00000608263 PPOXP50336 477 aa8.42□□□□□ -1.06
CTCFL-216ENST00000608263 TWIST1Q15672 202 aa8.42□□□□□ -1.06
CTCFL-216ENST00000608263 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.42□□□□□ -1.06
CTCFL-216ENST00000608263 Q8TCH9 128 aa8.42□□□□□ -1.06
CTCFL-216ENST00000608263 PROP1O75360 226 aa8.42□□□□□ -1.06
CTCFL-216ENST00000608263 TYMSP04818 313 aa8.42□□□□□ -1.06
CTCFL-216ENST00000608263 COMPP49747 757 aaPredicted RBP8.42□□□□□ -1.06
CTCFL-216ENST00000608263 SSBP2P81877 361 aaPredicted RBP8.42□□□□□ -1.06
CTCFL-216ENST00000608263 MBNL2Q5VZF2 373 aaKnown RBP8.42□□□□□ -1.06
CTCFL-216ENST00000608263 TMEM116Q8NCL8 245 aa8.42□□□□□ -1.06
CTCFL-216ENST00000608263 CACNG8Q8WXS5 425 aa8.42□□□□□ -1.06
CTCFL-216ENST00000608263 YPEL4Q96NS1 127 aa8.42□□□□□ -1.06
CTCFL-216ENST00000608263 NAA38Q9BRA0 125 aaKnown RBP8.42□□□□□ -1.06
CTCFL-216ENST00000608263 PYGO2Q9BRQ0 406 aa8.42□□□□□ -1.06
CTCFL-216ENST00000608263 CLEC7AQ9BXN2 247 aa8.42□□□□□ -1.06
CTCFL-216ENST00000608263 C9JCJ5 164 aa8.42□□□□□ -1.06
CTCFL-216ENST00000608263 APOHP02749 345 aaPredicted RBP8.42□□□□□ -1.06
CTCFL-216ENST00000608263 RPL24P83731 157 aaKnown RBP8.42□□□□□ -1.06
CTCFL-216ENST00000608263 SLAQ13239 276 aa8.42□□□□□ -1.06
CTCFL-216ENST00000608263 TMEM200BQ69YZ2 307 aa8.42□□□□□ -1.06
CTCFL-216ENST00000608263 GAFA1Q96PS6 74 aa8.42□□□□□ -1.06
CTCFL-216ENST00000608263 RPP21Q9H633 154 aaKnown RBP8.42□□□□□ -1.06
CTCFL-216ENST00000608263 KIAA1549Q9HCM3 1950 aa8.42□□□□□ -1.06
CTCFL-216ENST00000608263 HECTD1Q9ULT8 2610 aa8.41□□□□□ -1.06
CTCFL-216ENST00000608263 TCRBV4S1A1TA0A5B7 111 aa8.41□□□□□ -1.06
CTCFL-216ENST00000608263 IGHG3P01860 377 aa8.41□□□□□ -1.06
CTCFL-216ENST00000608263 RPL15P61313 204 aaKnown RBP8.41□□□□□ -1.06
CTCFL-216ENST00000608263 C17orf58Q2M2W7 97 aa8.41□□□□□ -1.06
CTCFL-216ENST00000608263 ZNF672Q499Z4 452 aaPredicted RBP8.41□□□□□ -1.06
CTCFL-216ENST00000608263 CCDC144NLQ6NUI1 221 aa8.41□□□□□ -1.06
CTCFL-216ENST00000608263 AP5S1Q9NUS5 200 aa8.41□□□□□ -1.06
CTCFL-216ENST00000608263 LINC00527Q9UJ94 153 aa8.41□□□□□ -1.06
CTCFL-216ENST00000608263 HSPB8Q9UJY1 196 aa8.41□□□□□ -1.06
CTCFL-216ENST00000608263 V9GYV3 84 aa8.41□□□□□ -1.06
CTCFL-216ENST00000608263 CEP192Q8TEP8 1941 aa8.41□□□□□ -1.06
CTCFL-216ENST00000608263 S100A4P26447 101 aaKnown RBP8.41□□□□□ -1.06
CTCFL-216ENST00000608263 TSKUQ8WUA8 353 aa8.41□□□□□ -1.06
CTCFL-216ENST00000608263 IGFBPL1Q8WX77 278 aa8.41□□□□□ -1.06
CTCFL-216ENST00000608263 YAE1D1Q9NRH1 226 aa8.41□□□□□ -1.06
CTCFL-216ENST00000608263 RABAC1Q9UI14 185 aa8.41□□□□□ -1.06
CTCFL-216ENST00000608263 KMT2EQ8IZD2 1858 aa8.41□□□□□ -1.06
CTCFL-216ENST00000608263 TMEM189A5PLL7 270 aa8.41□□□□□ -1.06
CTCFL-216ENST00000608263 MBD3L4A6NDZ8 208 aaPredicted RBP8.41□□□□□ -1.06
CTCFL-216ENST00000608263 MBD3L3A6NE82 208 aaPredicted RBP8.41□□□□□ -1.06
CTCFL-216ENST00000608263 MBD3L5A6NJ08 208 aaPredicted RBP8.41□□□□□ -1.06
CTCFL-216ENST00000608263 WNT2P09544 360 aa8.41□□□□□ -1.06
CTCFL-216ENST00000608263 CKS2P33552 79 aa8.41□□□□□ -1.06
CTCFL-216ENST00000608263 MORN5Q5VZ52 161 aa8.41□□□□□ -1.06
CTCFL-216ENST00000608263 TMEM136Q6ZRR5 245 aa8.41□□□□□ -1.06
CTCFL-216ENST00000608263 MBD3L2Q8NHZ7 208 aaPredicted RBP8.41□□□□□ -1.06
CTCFL-216ENST00000608263 TPSG1Q9NRR2 321 aa8.41□□□□□ -1.06
CTCFL-216ENST00000608263 PRRC2AP48634 2157 aaKnown RBP8.41□□□□□ -1.06
CTCFL-216ENST00000608263 CPAMD8Q8IZJ3 1885 aa8.41□□□□□ -1.06
CTCFL-216ENST00000608263 LOXL3P58215 753 aa8.4□□□□□ -1.06
CTCFL-216ENST00000608263 Q71RC1 249 aaPredicted RBP8.4□□□□□ -1.06
CTCFL-216ENST00000608263 ZNF207O43670 478 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms