RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 J3QQQ9 107 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 PIRO00625 290 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 FFAR1O14842 300 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 KLF7O75840 302 aaPredicted RBP3.12□□□□□ -1.91
LINC00397-202ENST00000606785 ARL6IP5O75915 188 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 CYB5AP00167 134 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 HRASP01112 189 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 KRASP01116 189 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 CECR9P0C854 216 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 TRGC1P0CF51 173 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 RPS4Y1P22090 263 aaKnown RBP3.12□□□□□ -1.91
LINC00397-202ENST00000606785 PPP1CCP36873 323 aaKnown RBP3.12□□□□□ -1.91
LINC00397-202ENST00000606785 CCR2P41597 374 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 LPAR6P43657 344 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 H2BFSP57053 126 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 ENDOGQ14249 297 aaKnown RBP3.12□□□□□ -1.91
LINC00397-202ENST00000606785 C12orf74Q32Q52 190 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 Q6AWC8 147 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 Q6ZUT4 128 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 SLC25A45Q8N413 288 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 OR2T35Q8NGX2 323 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 RTN4IP1Q8WWV3 396 aaPredicted RBP3.12□□□□□ -1.91
LINC00397-202ENST00000606785 POP5Q969H6 163 aaKnown RBP3.12□□□□□ -1.91
LINC00397-202ENST00000606785 SNRNP25Q9BV90 132 aaKnown RBP3.12□□□□□ -1.91
LINC00397-202ENST00000606785 TMEM147Q9BVK8 224 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 TSSK6Q9BXA6 273 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 TVP23BQ9NYZ1 205 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 RBM12B-AS1Q9P1G2 102 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 CACFD1Q9UGQ2 172 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 LINC00312Q9Y6C7 94 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 MYH8P13535 1937 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 SUPT6HQ7KZ85 1726 aaKnown RBP3.12□□□□□ -1.91
LINC00397-202ENST00000606785 PPLO60437 1756 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 SCN1AP35498 2009 aa3.12□□□□□ -1.91
LINC00397-202ENST00000606785 RAPGEF6Q8TEU7 1601 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 TANC1Q9C0D5 1861 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 SVILO95425 2214 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 EHBP1L1Q8N3D4 1523 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 hCG_1818297A0A087WSY0 165 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 PGPA6NDG6 321 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 OR2T8A6NH00 312 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 A8MT66 165 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 C9JQL5 133 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 TMEM262E9PQX1 116 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 F8W1H4 67 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 PLA2G10O15496 165 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 LYRM1O43325 122 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 PGLYRP1O75594 196 aaPredicted RBP3.11□□□□□ -1.91
LINC00397-202ENST00000606785 SFT2D2O95562 160 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 ATP5G1P05496 136 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 IGLC2P0DOY2 106 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 IGLC3P0DOY3 106 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 HINT1P49773 126 aaPredicted RBP3.11□□□□□ -1.91
LINC00397-202ENST00000606785 ATP5G2Q06055 141 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 ZNF816Q0VGE8 651 aaPredicted RBP3.11□□□□□ -1.91
LINC00397-202ENST00000606785 C1DQ13901 141 aaKnown RBP3.11□□□□□ -1.91
LINC00397-202ENST00000606785 ELOCQ15369 112 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 ADIRFQ15847 76 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 UBE2NLQ5JXB2 153 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 AMTNQ6UX39 209 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 TMEM14EPQ6UXP3 125 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 SSX8Q7RTT4 187 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 ANKRD29Q8N6D5 301 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 SPANXA2-OT1Q8N9U9 137 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 ZNF555Q8NEP9 628 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 OR4C16Q8NGL9 310 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 OR5H2Q8NGV7 314 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 OR4A5Q8NH83 315 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 ATP6V0E2Q8NHE4 81 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 CARD19Q96LW7 228 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 GNB1LQ9BYB4 327 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 DUSP21Q9H596 190 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 TMEM106BQ9NUM4 274 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 V9GYH0 126 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 GLI3P10071 1580 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 TIAM1Q13009 1591 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 MIA3Q5JRA6 1907 aa3.11□□□□□ -1.91
LINC00397-202ENST00000606785 PPRC1Q5VV67 1664 aaKnown RBP3.11□□□□□ -1.91
LINC00397-202ENST00000606785 ATRNO75882 1429 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 MYO10Q9HD67 2058 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 ARHGAP5Q13017 1502 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 DOCK5Q9H7D0 1870 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 UNC13BO14795 1591 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 UGGT1Q9NYU2 1555 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 IGKV2D-24A0A075B6R9 120 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 TRDV1A0A1B0GX56 115 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 KNCNA6PVL3 124 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 F5H5P2 479 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 H3BP45 60 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 LY6LH3BQJ8 138 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 ISLRO14498 428 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 COX7A2P2O60397 106 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 PDCD6O75340 191 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 UBL3O95164 117 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 SFTA3P0C7M3 94 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 P0DMU3 169 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 FAM231AP0DMU4 169 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 FAM231CP0DMU5 169 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 ATP5G3P48201 142 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 KRTAP10-3P60369 221 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms