RNA–Protein interactions for RNA: ENST00000599569.2

SSR4P1-203, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 2,260 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-203ENST00000599569 CMTM2Q8TAZ6 248 aa12.54□□□□□ -0.4
SSR4P1-203ENST00000599569 IGFBPL1Q8WX77 278 aa12.54□□□□□ -0.4
SSR4P1-203ENST00000599569 MBD6Q96DN6 1003 aa12.54□□□□□ -0.4
SSR4P1-203ENST00000599569 DOPEY1Q5JWR5 2465 aa12.53□□□□□ -0.4
SSR4P1-203ENST00000599569 UTP20O75691 2785 aaKnown RBP12.53□□□□□ -0.4
SSR4P1-203ENST00000599569 TSTD3H0UI37 97 aa12.53□□□□□ -0.4
SSR4P1-203ENST00000599569 HES1Q14469 280 aa12.53□□□□□ -0.4
SSR4P1-203ENST00000599569 C5orf17Q8NAS9 161 aa12.53□□□□□ -0.4
SSR4P1-203ENST00000599569 NUDT10Q8NFP7 164 aa12.53□□□□□ -0.4
SSR4P1-203ENST00000599569 NUDT11Q96G61 164 aa12.53□□□□□ -0.4
SSR4P1-203ENST00000599569 FAM103A1Q9BTL3 118 aaKnown RBP12.53□□□□□ -0.4
SSR4P1-203ENST00000599569 SLC25A39Q9BZJ4 359 aaPredicted RBP12.53□□□□□ -0.4
SSR4P1-203ENST00000599569 IZUMO1RA6ND01 250 aa12.53□□□□□ -0.4
SSR4P1-203ENST00000599569 ESDP10768 282 aa12.53□□□□□ -0.4
SSR4P1-203ENST00000599569 Q0VG73 95 aa12.53□□□□□ -0.4
SSR4P1-203ENST00000599569 C5orf64Q2M2E5 130 aa12.53□□□□□ -0.4
SSR4P1-203ENST00000599569 SMIM12Q96EX1 92 aa12.53□□□□□ -0.4
SSR4P1-203ENST00000599569 ATG101Q9BSB4 218 aa12.53□□□□□ -0.4
SSR4P1-203ENST00000599569 MRPL27Q9P0M9 148 aaKnown RBP12.53□□□□□ -0.4
SSR4P1-203ENST00000599569 AMY1AP04745 511 aa12.52□□□□□ -0.41
SSR4P1-203ENST00000599569 CDKN1AP38936 164 aa12.52□□□□□ -0.41
SSR4P1-203ENST00000599569 LINC00310P59036 64 aa12.52□□□□□ -0.41
SSR4P1-203ENST00000599569 ASPHD1Q5U4P2 390 aa12.52□□□□□ -0.41
SSR4P1-203ENST00000599569 VMO1Q7Z5L0 202 aa12.52□□□□□ -0.41
SSR4P1-203ENST00000599569 KIR3DL3Q8N743 410 aa12.52□□□□□ -0.41
SSR4P1-203ENST00000599569 GPR82Q96P67 336 aa12.52□□□□□ -0.41
SSR4P1-203ENST00000599569 Q9H3A6 140 aa12.52□□□□□ -0.41
SSR4P1-203ENST00000599569 C7orf69Q9H7B7 122 aa12.52□□□□□ -0.41
SSR4P1-203ENST00000599569 TMEM14CQ9P0S9 112 aa12.52□□□□□ -0.41
SSR4P1-203ENST00000599569 ZFP36P26651 326 aaKnown RBP12.51□□□□□ -0.41
SSR4P1-203ENST00000599569 FBLN7Q53RD9 439 aa12.51□□□□□ -0.41
SSR4P1-203ENST00000599569 CCDC144NLQ6NUI1 221 aa12.51□□□□□ -0.41
SSR4P1-203ENST00000599569 MRPL54Q6P161 138 aaKnown RBP12.51□□□□□ -0.41
SSR4P1-203ENST00000599569 GRAMD2BQ96HH9 432 aa12.51□□□□□ -0.41
SSR4P1-203ENST00000599569 SGK494Q96LW2 274 aa12.51□□□□□ -0.41
SSR4P1-203ENST00000599569 CHRDL1Q9BU40 450 aa12.51□□□□□ -0.41
SSR4P1-203ENST00000599569 PRO1933Q9H354 126 aa12.51□□□□□ -0.41
SSR4P1-203ENST00000599569 SPTAN1Q13813 2472 aaKnown RBP12.51□□□□□ -0.41
SSR4P1-203ENST00000599569 H3BTX0 84 aa12.51□□□□□ -0.41
SSR4P1-203ENST00000599569 NDUFS7O75251 213 aa12.51□□□□□ -0.41
SSR4P1-203ENST00000599569 HLA-DQA1P01909 254 aa12.51□□□□□ -0.41
SSR4P1-203ENST00000599569 PRR27Q6MZM9 219 aa12.51□□□□□ -0.41
SSR4P1-203ENST00000599569 RPH3ALQ9UNE2 315 aa12.51□□□□□ -0.41
SSR4P1-203ENST00000599569 OOSP1A8MZH6 123 aa12.5□□□□□ -0.41
SSR4P1-203ENST00000599569 SERF1AO75920 110 aa12.5□□□□□ -0.41
SSR4P1-203ENST00000599569 TCRAP04437 139 aa12.5□□□□□ -0.41
SSR4P1-203ENST00000599569 HIST1H1EP10412 219 aaKnown RBP12.5□□□□□ -0.41
SSR4P1-203ENST00000599569 RAB4BP61018 213 aa12.5□□□□□ -0.41
SSR4P1-203ENST00000599569 PAFAH1B2P68402 229 aa12.5□□□□□ -0.41
SSR4P1-203ENST00000599569 DEFA6Q01524 100 aa12.5□□□□□ -0.41
SSR4P1-203ENST00000599569 IQCJQ1A5X6 159 aa12.5□□□□□ -0.41
SSR4P1-203ENST00000599569 ZNF562Q6V9R5 426 aa12.5□□□□□ -0.41
SSR4P1-203ENST00000599569 BAGE3Q86Y29 109 aa12.5□□□□□ -0.41
SSR4P1-203ENST00000599569 DYNAPQ8N1N2 210 aa12.5□□□□□ -0.41
SSR4P1-203ENST00000599569 ZNF664Q8N3J9 261 aa12.5□□□□□ -0.41
SSR4P1-203ENST00000599569 FMC1Q96HJ9 113 aa12.5□□□□□ -0.41
SSR4P1-203ENST00000599569 MS4A10Q96PG2 267 aa12.5□□□□□ -0.41
SSR4P1-203ENST00000599569 MLST8Q9BVC4 326 aa12.5□□□□□ -0.41
SSR4P1-203ENST00000599569 TOMM40O96008 361 aa12.5□□□□□ -0.41
SSR4P1-203ENST00000599569 TMEM68Q96MH6 324 aa12.5□□□□□ -0.41
SSR4P1-203ENST00000599569 ZNF586Q9NXT0 402 aa12.5□□□□□ -0.41
SSR4P1-203ENST00000599569 A6NNC1 897 aa12.49□□□□□ -0.41
SSR4P1-203ENST00000599569 DDTP30046 118 aa12.49□□□□□ -0.41
SSR4P1-203ENST00000599569 TPPP2P59282 170 aa12.49□□□□□ -0.41
SSR4P1-203ENST00000599569 USF2Q15853 346 aaPredicted RBP12.49□□□□□ -0.41
SSR4P1-203ENST00000599569 KLF17Q5JT82 389 aaPredicted RBP12.49□□□□□ -0.41
SSR4P1-203ENST00000599569 MINOS1Q5TGZ0 78 aa12.49□□□□□ -0.41
SSR4P1-203ENST00000599569 RASL11AQ6T310 242 aa12.49□□□□□ -0.41
SSR4P1-203ENST00000599569 ZNF331Q9NQX6 463 aaPredicted RBP12.49□□□□□ -0.41
SSR4P1-203ENST00000599569 OTORQ9NRC9 128 aa12.49□□□□□ -0.41
SSR4P1-203ENST00000599569 MINOS1-NBL1R4GNA1 71 aa12.49□□□□□ -0.41
SSR4P1-203ENST00000599569 WNK2Q9Y3S1 2297 aa12.49□□□□□ -0.41
SSR4P1-203ENST00000599569 NPIPB5A8MRT5 1133 aa12.49□□□□□ -0.41
SSR4P1-203ENST00000599569 LTAP01374 205 aa12.49□□□□□ -0.41
SSR4P1-203ENST00000599569 PAX1P15863 534 aa12.49□□□□□ -0.41
SSR4P1-203ENST00000599569 HOXB4P17483 251 aaPredicted RBP12.49□□□□□ -0.41
SSR4P1-203ENST00000599569 KIAA1644Q3SXP7 199 aa12.49□□□□□ -0.41
SSR4P1-203ENST00000599569 NUP35Q8NFH5 326 aa12.49□□□□□ -0.41
SSR4P1-203ENST00000599569 WIPF2Q8TF74 440 aaPredicted RBP12.49□□□□□ -0.41
SSR4P1-203ENST00000599569 TSKUQ8WUA8 353 aa12.49□□□□□ -0.41
SSR4P1-203ENST00000599569 GNB4Q9HAV0 340 aa12.49□□□□□ -0.41
SSR4P1-203ENST00000599569 NCBP2LA6PVI3 153 aaKnown RBP12.48□□□□□ -0.41
SSR4P1-203ENST00000599569 F2Z2F3 143 aa12.48□□□□□ -0.41
SSR4P1-203ENST00000599569 EBI3Q14213 229 aa12.48□□□□□ -0.41
SSR4P1-203ENST00000599569 Q8N6K4 173 aa12.48□□□□□ -0.41
SSR4P1-203ENST00000599569 ZNF491Q8N8L2 437 aa12.48□□□□□ -0.41
SSR4P1-203ENST00000599569 FANCD2OSQ96PS1 177 aa12.48□□□□□ -0.41
SSR4P1-203ENST00000599569 SHANK2-AS3Q9BTD1 123 aa12.48□□□□□ -0.41
SSR4P1-203ENST00000599569 UBTD1Q9HAC8 227 aa12.48□□□□□ -0.41
SSR4P1-203ENST00000599569 BMPR1BO00238 502 aa12.48□□□□□ -0.41
SSR4P1-203ENST00000599569 OR10J3Q5JRS4 329 aa12.48□□□□□ -0.41
SSR4P1-203ENST00000599569 ARPC1AQ92747 370 aa12.48□□□□□ -0.41
SSR4P1-203ENST00000599569 SIRPDQ9H106 197 aa12.48□□□□□ -0.41
SSR4P1-203ENST00000599569 MED13LQ71F56 2210 aa12.47□□□□□ -0.41
SSR4P1-203ENST00000599569 IGLV11-55A0A075B6I3 123 aa12.47□□□□□ -0.41
SSR4P1-203ENST00000599569 H3BRN7 92 aa12.47□□□□□ -0.41
SSR4P1-203ENST00000599569 SCGB1D1O95968 90 aa12.47□□□□□ -0.41
SSR4P1-203ENST00000599569 EFNA4P52798 201 aa12.47□□□□□ -0.41
SSR4P1-203ENST00000599569 BPIFA4PQ86YQ2 179 aa12.47□□□□□ -0.41
SSR4P1-203ENST00000599569 RNF125Q96EQ8 232 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms