RNA–Protein interactions for RNA: ENST00000595689.2

SSX4-201, Transcript of SSX family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4-201ENST00000595689 ALMS1Q8TCU4 4167 aa4.26□□□□□ -1.73
SSX4-201ENST00000595689 DNAH1Q9P2D7 4330 aa4.26□□□□□ -1.73
SSX4-201ENST00000595689 NUPR2A6NF83 97 aa4.25□□□□□ -1.73
SSX4-201ENST00000595689 CENPXA8MT69 81 aa4.25□□□□□ -1.73
SSX4-201ENST00000595689 CCSO14618 274 aa4.25□□□□□ -1.73
SSX4-201ENST00000595689 LYRM1O43325 122 aa4.25□□□□□ -1.73
SSX4-201ENST00000595689 SSSCA1O60232 199 aa4.25□□□□□ -1.73
SSX4-201ENST00000595689 SCGB1D2O95969 90 aa4.25□□□□□ -1.73
SSX4-201ENST00000595689 FABP1P07148 127 aa4.25□□□□□ -1.73
SSX4-201ENST00000595689 RBMY1A1P0DJD3 496 aaKnown RBP4.25□□□□□ -1.73
SSX4-201ENST00000595689 RBMY1CP0DJD4 496 aa4.25□□□□□ -1.73
SSX4-201ENST00000595689 GATA2P23769 480 aaPredicted RBP4.25□□□□□ -1.73
SSX4-201ENST00000595689 NKX2-1P43699 371 aaPredicted RBP4.25□□□□□ -1.73
SSX4-201ENST00000595689 AP2S1P53680 142 aaPredicted RBP4.25□□□□□ -1.73
SSX4-201ENST00000595689 PAX9P55771 341 aa4.25□□□□□ -1.73
SSX4-201ENST00000595689 NANOS2P60321 138 aaKnown RBP4.25□□□□□ -1.73
SSX4-201ENST00000595689 RPP30P78346 268 aaKnown RBP4.25□□□□□ -1.73
SSX4-201ENST00000595689 AKR1C1Q04828 323 aa4.25□□□□□ -1.73
SSX4-201ENST00000595689 RBMY1FQ15415 496 aaKnown RBP4.25□□□□□ -1.73
SSX4-201ENST00000595689 GDF5OSQ5U4N7 250 aa4.25□□□□□ -1.73
SSX4-201ENST00000595689 MORN3Q6PF18 240 aaPredicted RBP4.25□□□□□ -1.73
SSX4-201ENST00000595689 TMEM217Q8N7C4 229 aa4.25□□□□□ -1.73
SSX4-201ENST00000595689 Q8NAQ8 132 aa4.25□□□□□ -1.73
SSX4-201ENST00000595689 CSNK1G2-AS1Q8NCQ2 148 aa4.25□□□□□ -1.73
SSX4-201ENST00000595689 PHLDA1Q8WV24 401 aaPredicted RBP4.25□□□□□ -1.73
SSX4-201ENST00000595689 MITD1Q8WV92 249 aa4.25□□□□□ -1.73
SSX4-201ENST00000595689 LINC00476Q8WZB0 136 aa4.25□□□□□ -1.73
SSX4-201ENST00000595689 C17orf77Q96MU5 243 aa4.25□□□□□ -1.73
SSX4-201ENST00000595689 SEC22CQ9BRL7 303 aa4.25□□□□□ -1.73
SSX4-201ENST00000595689 SSBP4Q9BWG4 385 aaPredicted RBP4.25□□□□□ -1.73
SSX4-201ENST00000595689 SLC25A32Q9H2D1 315 aa4.25□□□□□ -1.73
SSX4-201ENST00000595689 TENM2Q9NT68 2774 aa4.25□□□□□ -1.73
SSX4-201ENST00000595689 PSENENQ9NZ42 101 aa4.25□□□□□ -1.73
SSX4-201ENST00000595689 NDUFA13Q9P0J0 144 aa4.25□□□□□ -1.73
SSX4-201ENST00000595689 RCL1Q9Y2P8 373 aaKnown RBP4.25□□□□□ -1.73
SSX4-201ENST00000595689 STRAPQ9Y3F4 350 aaKnown RBP4.25□□□□□ -1.73
SSX4-201ENST00000595689 X6R8D5 127 aa4.25□□□□□ -1.73
SSX4-201ENST00000595689 TRAV6A0A075B6T7 132 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 IGHV4-28A0A0C4DH34 117 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 SMCO3A2RU48 225 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 ZNF705EA8MWA4 302 aaPredicted RBP4.24□□□□□ -1.73
SSX4-201ENST00000595689 SNRPGP15A8MWD9 76 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 H3BMM0 161 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 IFNA21P01568 189 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 TCRBP04435 133 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 METTL15P1P0C7V9 234 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 HLA-DRB4P13762 266 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 NUP62P37198 522 aaPredicted RBP4.24□□□□□ -1.73
SSX4-201ENST00000595689 RRAS2P62070 204 aaPredicted RBP4.24□□□□□ -1.73
SSX4-201ENST00000595689 SNRPD3P62318 126 aaKnown RBP4.24□□□□□ -1.73
SSX4-201ENST00000595689 IAH1Q2TAA2 248 aaPredicted RBP4.24□□□□□ -1.73
SSX4-201ENST00000595689 TMEM41BQ5BJD5 291 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 C1orf194Q5T5A4 169 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 TMEM14EPQ6UXP3 125 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 CYP2G1PQ6ZSU1 146 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 TMEM144Q7Z5S9 345 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 ZBTB8BQ8NAP8 495 aaPredicted RBP4.24□□□□□ -1.73
SSX4-201ENST00000595689 C11orf45Q8TAV5 145 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 PPP1R14BQ96C90 147 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 SMIM8Q96KF7 97 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 C20orf173Q96LM9 149 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 LINC00052Q96N35 136 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 SLC25A22Q9H936 323 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 SEPSECSQ9HD40 501 aaKnown RBP4.24□□□□□ -1.73
SSX4-201ENST00000595689 NUDT15Q9NV35 164 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 DOK5Q9P104 306 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 XCL2Q9UBD3 114 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 FBXL17Q9UF56 701 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 HLA-DRB4X5D2U9 266 aa4.24□□□□□ -1.73
SSX4-201ENST00000595689 ZNF98A6NK75 572 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 F6UB75 175 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 H3BRN7 92 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 EREGO14944 169 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 TSC22D2O75157 780 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 LY6G6CO95867 125 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 IGKV3-20P01619 116 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 MBPP02686 304 aaPredicted RBP4.23□□□□□ -1.73
SSX4-201ENST00000595689 MIFP14174 115 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 ORM2P19652 201 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 PSMB3P49720 205 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 FXYD7P58549 80 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 DLK1P80370 383 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 SLC38A11Q08AI6 406 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 ARL16Q0P5N6 197 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 CNPY1Q3B7I2 92 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 OR8I2Q8N0Y5 310 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 ZNF709Q8N972 641 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 BPIFCQ8NFQ6 507 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 OR1B1Q8NGR6 318 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 ZNF431Q8TF32 576 aaPredicted RBP4.23□□□□□ -1.73
SSX4-201ENST00000595689 CCDC32Q9BV29 185 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 SCRT1Q9BWW7 348 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 SAV1Q9H4B6 383 aaPredicted RBP4.23□□□□□ -1.73
SSX4-201ENST00000595689 GSKIPQ9P0R6 139 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 PFDN2Q9UHV9 154 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 TBC1D24Q9ULP9 559 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 SLC45A2Q9UMX9 530 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 CELA1Q9UNI1 258 aa4.23□□□□□ -1.73
SSX4-201ENST00000595689 KLK5Q9Y337 293 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms