RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 DCANP1Q8TF63 244 aa11.36□□□□□ -0.59
TRIM47-206ENST00000592942 GGACTQ9BVM4 153 aa11.36□□□□□ -0.59
TRIM47-206ENST00000592942 LYRM2Q9NU23 88 aaPredicted RBP11.36□□□□□ -0.59
TRIM47-206ENST00000592942 OR5AC2Q9NZP5 309 aa11.36□□□□□ -0.59
TRIM47-206ENST00000592942 TRAV2A0A0B4J234 112 aa11.35□□□□□ -0.59
TRIM47-206ENST00000592942 SMLR1H3BR10 107 aa11.35□□□□□ -0.59
TRIM47-206ENST00000592942 K7EQG2 157 aa11.35□□□□□ -0.59
TRIM47-206ENST00000592942 FABP1P07148 127 aa11.35□□□□□ -0.59
TRIM47-206ENST00000592942 CAV2P51636 162 aa11.35□□□□□ -0.59
TRIM47-206ENST00000592942 LYZP61626 148 aa11.35□□□□□ -0.59
TRIM47-206ENST00000592942 CD300CQ08708 224 aa11.35□□□□□ -0.59
TRIM47-206ENST00000592942 ZNF124Q15973 351 aa11.35□□□□□ -0.59
TRIM47-206ENST00000592942 CYP2G1PQ6ZSU1 146 aa11.35□□□□□ -0.59
TRIM47-206ENST00000592942 PBDC1Q9BVG4 233 aa11.35□□□□□ -0.59
TRIM47-206ENST00000592942 MBD2Q9UBB5 411 aa11.35□□□□□ -0.59
TRIM47-206ENST00000592942 SMCO3A2RU48 225 aa11.34□□□□□ -0.59
TRIM47-206ENST00000592942 CFDP00746 253 aaPredicted RBP11.34□□□□□ -0.59
TRIM47-206ENST00000592942 C1QBP02746 253 aa11.34□□□□□ -0.59
TRIM47-206ENST00000592942 RPL11P62913 178 aaKnown RBP11.34□□□□□ -0.59
TRIM47-206ENST00000592942 PAFAH1B2P68402 229 aa11.34□□□□□ -0.59
TRIM47-206ENST00000592942 APRG1Q8IVJ8 170 aa11.34□□□□□ -0.59
TRIM47-206ENST00000592942 GRAMD2BQ96HH9 432 aa11.34□□□□□ -0.59
TRIM47-206ENST00000592942 NARS2Q96I59 477 aaKnown RBP11.34□□□□□ -0.59
TRIM47-206ENST00000592942 MAP6D1Q9H9H5 199 aa11.34□□□□□ -0.59
TRIM47-206ENST00000592942 U3KQK5 164 aa11.34□□□□□ -0.59
TRIM47-206ENST00000592942 HMSDA8MTL9 139 aa11.33□□□□□ -0.6
TRIM47-206ENST00000592942 DNASE2O00115 360 aaPredicted RBP11.33□□□□□ -0.6
TRIM47-206ENST00000592942 SULT1A1P50225 295 aa11.33□□□□□ -0.6
TRIM47-206ENST00000592942 PLP1P60201 277 aa11.33□□□□□ -0.6
TRIM47-206ENST00000592942 SLC38A11Q08AI6 406 aa11.33□□□□□ -0.6
TRIM47-206ENST00000592942 VWC2Q2TAL6 325 aa11.33□□□□□ -0.6
TRIM47-206ENST00000592942 TEPPQ6URK8 271 aa11.33□□□□□ -0.6
TRIM47-206ENST00000592942 TMEM217Q8N7C4 229 aa11.33□□□□□ -0.6
TRIM47-206ENST00000592942 C17orf77Q96MU5 243 aa11.33□□□□□ -0.6
TRIM47-206ENST00000592942 SLC45A2Q9UMX9 530 aa11.33□□□□□ -0.6
TRIM47-206ENST00000592942 RYR3Q15413 4870 aa11.32□□□□□ -0.6
TRIM47-206ENST00000592942 ORM2P19652 201 aa11.32□□□□□ -0.6
TRIM47-206ENST00000592942 AP2S1P53680 142 aaPredicted RBP11.32□□□□□ -0.6
TRIM47-206ENST00000592942 CMC4P56277 68 aaPredicted RBP11.32□□□□□ -0.6
TRIM47-206ENST00000592942 NHLH2Q02577 135 aa11.32□□□□□ -0.6
TRIM47-206ENST00000592942 C1orf194Q5T5A4 169 aa11.32□□□□□ -0.6
TRIM47-206ENST00000592942 PATE2Q6UY27 113 aa11.32□□□□□ -0.6
TRIM47-206ENST00000592942 BPIFCQ8NFQ6 507 aa11.32□□□□□ -0.6
TRIM47-206ENST00000592942 STXBP6Q8NFX7 210 aa11.32□□□□□ -0.6
TRIM47-206ENST00000592942 OR11H4Q8NGC9 324 aa11.32□□□□□ -0.6
TRIM47-206ENST00000592942 PPP1R14BQ96C90 147 aa11.32□□□□□ -0.6
TRIM47-206ENST00000592942 HYLS1Q96M11 299 aa11.32□□□□□ -0.6
TRIM47-206ENST00000592942 MGST2Q99735 147 aa11.32□□□□□ -0.6
TRIM47-206ENST00000592942 TNFSF18Q9UNG2 199 aa11.32□□□□□ -0.6
TRIM47-206ENST00000592942 FXYD6-FXYD2A0A087WZ82 144 aa11.31□□□□□ -0.6
TRIM47-206ENST00000592942 LOC102724200A0A096LPH7 203 aaPredicted RBP11.31□□□□□ -0.6
TRIM47-206ENST00000592942 HELTA6NFD8 242 aa11.31□□□□□ -0.6
TRIM47-206ENST00000592942 ZNF98A6NK75 572 aa11.31□□□□□ -0.6
TRIM47-206ENST00000592942 AGPAT2O15120 278 aa11.31□□□□□ -0.6
TRIM47-206ENST00000592942 LINC00869P0C866 280 aa11.31□□□□□ -0.6
TRIM47-206ENST00000592942 S100A11P31949 105 aa11.31□□□□□ -0.6
TRIM47-206ENST00000592942 DEFB131AP59861 70 aa11.31□□□□□ -0.6
TRIM47-206ENST00000592942 SELENOTP62341 195 aa11.31□□□□□ -0.6
TRIM47-206ENST00000592942 ZFP69Q49AA0 526 aa11.31□□□□□ -0.6
TRIM47-206ENST00000592942 SIGLEC15Q6ZMC9 328 aa11.31□□□□□ -0.6
TRIM47-206ENST00000592942 ZNF546Q86UE3 836 aa11.31□□□□□ -0.6
TRIM47-206ENST00000592942 RCHY1Q96PM5 261 aa11.31□□□□□ -0.6
TRIM47-206ENST00000592942 AQP10Q96PS8 301 aa11.31□□□□□ -0.6
TRIM47-206ENST00000592942 SLC25A31Q9H0C2 315 aa11.31□□□□□ -0.6
TRIM47-206ENST00000592942 WDR83OSQ9Y284 106 aa11.31□□□□□ -0.6
TRIM47-206ENST00000592942 RPL12P30050 165 aaKnown RBP11.3□□□□□ -0.6
TRIM47-206ENST00000592942 NUP62P37198 522 aaPredicted RBP11.3□□□□□ -0.6
TRIM47-206ENST00000592942 OR1B1Q8NGR6 318 aa11.3□□□□□ -0.6
TRIM47-206ENST00000592942 GGTLC1Q9BX51 225 aa11.3□□□□□ -0.6
TRIM47-206ENST00000592942 ZMAT4Q9H898 229 aa11.3□□□□□ -0.6
TRIM47-206ENST00000592942 EWSR1Q01844 656 aaKnown RBP eCLIP11.29□□□□□ -0.6
TRIM47-206ENST00000592942 BAXQ07812 192 aa11.29□□□□□ -0.6
TRIM47-206ENST00000592942 ATP6V1FQ16864 119 aa11.29□□□□□ -0.6
TRIM47-206ENST00000592942 LEMD1Q68G75 181 aa11.29□□□□□ -0.6
TRIM47-206ENST00000592942 INO80EQ8NBZ0 244 aaPredicted RBP11.29□□□□□ -0.6
TRIM47-206ENST00000592942 SPATA25Q9BR10 227 aa11.29□□□□□ -0.6
TRIM47-206ENST00000592942 SLC25A39Q9BZJ4 359 aaPredicted RBP11.29□□□□□ -0.6
TRIM47-206ENST00000592942 RETNQ9HD89 108 aa11.29□□□□□ -0.6
TRIM47-206ENST00000592942 NRN1Q9NPD7 142 aa11.29□□□□□ -0.6
TRIM47-206ENST00000592942 UQCC1Q9NVA1 299 aa11.29□□□□□ -0.6
TRIM47-206ENST00000592942 DOK5Q9P104 306 aa11.29□□□□□ -0.6
TRIM47-206ENST00000592942 PFDN2Q9UHV9 154 aa11.29□□□□□ -0.6
TRIM47-206ENST00000592942 TENM3Q9P273 2699 aa11.29□□□□□ -0.6
TRIM47-206ENST00000592942 AGRNO00468 2067 aa11.28□□□□□ -0.6
TRIM47-206ENST00000592942 RNF222A6NCQ9 220 aa11.28□□□□□ -0.6
TRIM47-206ENST00000592942 H3BRN7 92 aa11.28□□□□□ -0.6
TRIM47-206ENST00000592942 SOCS3O14543 225 aa11.28□□□□□ -0.6
TRIM47-206ENST00000592942 ARPC5O15511 151 aa11.28□□□□□ -0.6
TRIM47-206ENST00000592942 HYPMO75409 117 aa11.28□□□□□ -0.6
TRIM47-206ENST00000592942 ZNF688P0C7X2 276 aa11.28□□□□□ -0.6
TRIM47-206ENST00000592942 PRR20EP86478 221 aa11.28□□□□□ -0.6
TRIM47-206ENST00000592942 PRR20CP86479 221 aa11.28□□□□□ -0.6
TRIM47-206ENST00000592942 PRR20DP86480 221 aa11.28□□□□□ -0.6
TRIM47-206ENST00000592942 PRR20BP86481 221 aa11.28□□□□□ -0.6
TRIM47-206ENST00000592942 PRR20AP86496 221 aa11.28□□□□□ -0.6
TRIM47-206ENST00000592942 ZNF345Q14585 488 aa11.28□□□□□ -0.6
TRIM47-206ENST00000592942 STX12Q86Y82 276 aa11.28□□□□□ -0.6
TRIM47-206ENST00000592942 TMEM37Q8WXS4 190 aa11.28□□□□□ -0.6
TRIM47-206ENST00000592942 SHANK2-AS3Q9BTD1 123 aa11.28□□□□□ -0.6
TRIM47-206ENST00000592942 TMEM147Q9BVK8 224 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 295 ms