RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 M6PRP20645 277 aa6.05□□□□□ -1.44
SMAD4-215ENST00000592911 SDC2P34741 201 aa6.05□□□□□ -1.44
SMAD4-215ENST00000592911 TSPAN5P62079 268 aa6.05□□□□□ -1.44
SMAD4-215ENST00000592911 RGS21Q2M5E4 152 aa6.05□□□□□ -1.44
SMAD4-215ENST00000592911 PHLDA2Q53GA4 152 aa6.05□□□□□ -1.44
SMAD4-215ENST00000592911 GDF5OSQ5U4N7 250 aa6.05□□□□□ -1.44
SMAD4-215ENST00000592911 ZNF493Q6ZR52 646 aa6.05□□□□□ -1.44
SMAD4-215ENST00000592911 GPR141Q7Z602 305 aa6.05□□□□□ -1.44
SMAD4-215ENST00000592911 OR4B1Q8NGF8 309 aa6.05□□□□□ -1.44
SMAD4-215ENST00000592911 RNF125Q96EQ8 232 aa6.05□□□□□ -1.44
SMAD4-215ENST00000592911 CDIP1Q9H305 208 aa6.05□□□□□ -1.44
SMAD4-215ENST00000592911 MRPL36Q9P0J6 103 aaKnown RBP6.05□□□□□ -1.44
SMAD4-215ENST00000592911 RABL2AQ9UBK7 228 aaPredicted RBP6.05□□□□□ -1.44
SMAD4-215ENST00000592911 RSL24D1Q9UHA3 163 aaKnown RBP6.05□□□□□ -1.44
SMAD4-215ENST00000592911 SLC45A2Q9UMX9 530 aa6.05□□□□□ -1.44
SMAD4-215ENST00000592911 CCDC160A6NGH7 325 aa6.04□□□□□ -1.44
SMAD4-215ENST00000592911 BOLA2-SMG1P6H3BVE0 249 aa6.04□□□□□ -1.44
SMAD4-215ENST00000592911 M0QYG6 137 aa6.04□□□□□ -1.44
SMAD4-215ENST00000592911 DUSP14O95147 198 aaKnown RBP6.04□□□□□ -1.44
SMAD4-215ENST00000592911 IGKV1-5P01602 117 aa6.04□□□□□ -1.44
SMAD4-215ENST00000592911 PMP2P02689 132 aa6.04□□□□□ -1.44
SMAD4-215ENST00000592911 PRSS3P35030 304 aa6.04□□□□□ -1.44
SMAD4-215ENST00000592911 RCVRNP35243 200 aa6.04□□□□□ -1.44
SMAD4-215ENST00000592911 HRH1P35367 487 aa6.04□□□□□ -1.44
SMAD4-215ENST00000592911 ETV6P41212 452 aa6.04□□□□□ -1.44
SMAD4-215ENST00000592911 RND2P52198 227 aa6.04□□□□□ -1.44
SMAD4-215ENST00000592911 ERVFC1-1P60608 527 aa6.04□□□□□ -1.44
SMAD4-215ENST00000592911 SRSF3P84103 164 aaKnown RBP6.04□□□□□ -1.44
SMAD4-215ENST00000592911 UBE2NLQ5JXB2 153 aa6.04□□□□□ -1.44
SMAD4-215ENST00000592911 TMEM69Q5SWH9 247 aa6.04□□□□□ -1.44
SMAD4-215ENST00000592911 NFE4Q86UQ8 179 aa6.04□□□□□ -1.44
SMAD4-215ENST00000592911 OR5H6Q8NGV6 325 aa6.04□□□□□ -1.44
SMAD4-215ENST00000592911 C16orf74Q96GX8 76 aa6.04□□□□□ -1.44
SMAD4-215ENST00000592911 SLC35B3Q9H1N7 401 aa6.04□□□□□ -1.44
SMAD4-215ENST00000592911 MRPS16Q9Y3D3 137 aaKnown RBP6.04□□□□□ -1.44
SMAD4-215ENST00000592911 IFNA5P01569 189 aa6.03□□□□□ -1.44
SMAD4-215ENST00000592911 XGP55808 180 aa6.03□□□□□ -1.44
SMAD4-215ENST00000592911 TAS2R60P59551 318 aa6.03□□□□□ -1.44
SMAD4-215ENST00000592911 CTAG1AP78358 180 aa6.03□□□□□ -1.44
SMAD4-215ENST00000592911 RNASE12Q5GAN4 147 aaKnown RBP6.03□□□□□ -1.44
SMAD4-215ENST00000592911 SERTAD4-AS1Q5TG53 156 aa6.03□□□□□ -1.44
SMAD4-215ENST00000592911 FAM78BQ5VT40 261 aa6.03□□□□□ -1.44
SMAD4-215ENST00000592911 AMTNQ6UX39 209 aa6.03□□□□□ -1.44
SMAD4-215ENST00000592911 LINC00299Q6ZSB3 139 aa6.03□□□□□ -1.44
SMAD4-215ENST00000592911 LYSMD2Q8IV50 215 aa6.03□□□□□ -1.44
SMAD4-215ENST00000592911 SLC7A5P1Q8MH63 180 aa6.03□□□□□ -1.44
SMAD4-215ENST00000592911 ARRDC1Q8N5I2 433 aa6.03□□□□□ -1.44
SMAD4-215ENST00000592911 OR4D5Q8NGN0 318 aa6.03□□□□□ -1.44
SMAD4-215ENST00000592911 ZFAND1Q8TCF1 268 aa6.03□□□□□ -1.44
SMAD4-215ENST00000592911 RXFP4Q8TDU9 374 aa6.03□□□□□ -1.44
SMAD4-215ENST00000592911 LINC00052Q96N35 136 aa6.03□□□□□ -1.44
SMAD4-215ENST00000592911 GPR82Q96P67 336 aa6.03□□□□□ -1.44
SMAD4-215ENST00000592911 C20orf144Q9BQM9 153 aa6.03□□□□□ -1.44
SMAD4-215ENST00000592911 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.03□□□□□ -1.44
SMAD4-215ENST00000592911 PLA2G2DQ9UNK4 145 aa6.03□□□□□ -1.44
SMAD4-215ENST00000592911 TIMM8BQ9Y5J9 83 aaPredicted RBP6.03□□□□□ -1.44
SMAD4-215ENST00000592911 SMIM30A4D0T7 59 aa6.02□□□□□ -1.45
SMAD4-215ENST00000592911 FAM25EA8MYX2 175 aa6.02□□□□□ -1.45
SMAD4-215ENST00000592911 IGKV3-20P01619 116 aa6.02□□□□□ -1.45
SMAD4-215ENST00000592911 SMIM18P0DKX4 95 aa6.02□□□□□ -1.45
SMAD4-215ENST00000592911 PSG1P11464 419 aa6.02□□□□□ -1.45
SMAD4-215ENST00000592911 TBPP20226 339 aa6.02□□□□□ -1.45
SMAD4-215ENST00000592911 UCP1P25874 307 aa6.02□□□□□ -1.45
SMAD4-215ENST00000592911 GALR1P47211 349 aa6.02□□□□□ -1.45
SMAD4-215ENST00000592911 AQP4P55087 323 aa6.02□□□□□ -1.45
SMAD4-215ENST00000592911 SUMO1P63165 101 aaKnown RBP6.02□□□□□ -1.45
SMAD4-215ENST00000592911 Q6ZRN7 208 aaPredicted RBP6.02□□□□□ -1.45
SMAD4-215ENST00000592911 Q6ZSN1 163 aa6.02□□□□□ -1.45
SMAD4-215ENST00000592911 CCDC71LQ8N9Z2 235 aa6.02□□□□□ -1.45
SMAD4-215ENST00000592911 GPX8Q8TED1 209 aa6.02□□□□□ -1.45
SMAD4-215ENST00000592911 GNPNAT1Q96EK6 184 aaPredicted RBP6.02□□□□□ -1.45
SMAD4-215ENST00000592911 KRTAP1-5Q9BYS1 174 aa6.02□□□□□ -1.45
SMAD4-215ENST00000592911 WDR12Q9GZL7 423 aaKnown RBP6.02□□□□□ -1.45
SMAD4-215ENST00000592911 HEYLQ9NQ87 328 aaPredicted RBP6.02□□□□□ -1.45
SMAD4-215ENST00000592911 U3KQ87 197 aa6.02□□□□□ -1.45
SMAD4-215ENST00000592911 PIGBOS1A0A0B4J2F0 54 aa6.01□□□□□ -1.45
SMAD4-215ENST00000592911 C3orf85A0A1B0GTC6 90 aa6.01□□□□□ -1.45
SMAD4-215ENST00000592911 PLAC8L1A1L4L8 177 aa6.01□□□□□ -1.45
SMAD4-215ENST00000592911 SNRPGP15A8MWD9 76 aa6.01□□□□□ -1.45
SMAD4-215ENST00000592911 CDS2O95674 445 aa6.01□□□□□ -1.45
SMAD4-215ENST00000592911 DEFB130BP0DP73 79 aa6.01□□□□□ -1.45
SMAD4-215ENST00000592911 DEFB130AP0DP74 79 aa6.01□□□□□ -1.45
SMAD4-215ENST00000592911 GPX4P36969 197 aaPredicted RBP6.01□□□□□ -1.45
SMAD4-215ENST00000592911 PIGPP57054 158 aa6.01□□□□□ -1.45
SMAD4-215ENST00000592911 FXYD7P58549 80 aa6.01□□□□□ -1.45
SMAD4-215ENST00000592911 ICAM4Q14773 271 aa6.01□□□□□ -1.45
SMAD4-215ENST00000592911 SPINK9Q5DT21 86 aa6.01□□□□□ -1.45
SMAD4-215ENST00000592911 NMSQ5H8A3 153 aa6.01□□□□□ -1.45
SMAD4-215ENST00000592911 LHFPL1Q86WI0 220 aa6.01□□□□□ -1.45
SMAD4-215ENST00000592911 OR8I2Q8N0Y5 310 aa6.01□□□□□ -1.45
SMAD4-215ENST00000592911 LINC00612Q8N6U2 182 aa6.01□□□□□ -1.45
SMAD4-215ENST00000592911 SUN5Q8TC36 379 aa6.01□□□□□ -1.45
SMAD4-215ENST00000592911 TMEM263Q8WUH6 116 aaKnown RBP6.01□□□□□ -1.45
SMAD4-215ENST00000592911 NPIPB3Q92617 1050 aa6.01□□□□□ -1.45
SMAD4-215ENST00000592911 TRIM63Q969Q1 353 aa6.01□□□□□ -1.45
SMAD4-215ENST00000592911 GPR146Q96CH1 333 aa6.01□□□□□ -1.45
SMAD4-215ENST00000592911 C17orf77Q96MU5 243 aa6.01□□□□□ -1.45
SMAD4-215ENST00000592911 MEIS3P1A6NDR6 274 aa6□□□□□ -1.45
SMAD4-215ENST00000592911 KRTAP29-1A8MX34 341 aaPredicted RBP6□□□□□ -1.45
SMAD4-215ENST00000592911 GABARAPH6UMI1 98 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms