RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, human

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP1-208	ENST00000585956	RNF212	Q495C1	297 aa		13.75	□□□□□ -0.21
PTBP1-208	ENST00000585956	TMEM182	Q6ZP80	229 aa	Predicted RBP	13.75	□□□□□ -0.21
PTBP1-208	ENST00000585956	COQ8A	Q8NI60	647 aa		13.75	□□□□□ -0.21
PTBP1-208	ENST00000585956	SMIM4	Q8WVI0	70 aa		13.75	□□□□□ -0.21
PTBP1-208	ENST00000585956	SLC25A32	Q9H2D1	315 aa		13.75	□□□□□ -0.21
PTBP1-208	ENST00000585956	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.74	□□□□□ -0.21
PTBP1-208	ENST00000585956	CRX	O43186	299 aa	Predicted RBP	13.74	□□□□□ -0.21
PTBP1-208	ENST00000585956	HBE1	P02100	147 aa		13.74	□□□□□ -0.21
PTBP1-208	ENST00000585956	SMCO1	Q147U7	214 aa		13.74	□□□□□ -0.21
PTBP1-208	ENST00000585956	SPCS2	Q15005	226 aa		13.74	□□□□□ -0.21
PTBP1-208	ENST00000585956	FCN2	Q15485	313 aa		13.74	□□□□□ -0.21
PTBP1-208	ENST00000585956	AP3S1	Q92572	193 aa		13.74	□□□□□ -0.21
PTBP1-208	ENST00000585956		U3KQ87	197 aa		13.74	□□□□□ -0.21
PTBP1-208	ENST00000585956	FAT1	Q14517	4588 aa		13.74	□□□□□ -0.21
PTBP1-208	ENST00000585956	PLAC8L1	A1L4L8	177 aa		13.73	□□□□□ -0.21
PTBP1-208	ENST00000585956	DISC1	C4P0D8	188 aa		13.73	□□□□□ -0.21
PTBP1-208	ENST00000585956		M0R2Z0	102 aa		13.73	□□□□□ -0.21
PTBP1-208	ENST00000585956	ID1	P41134	155 aa		13.73	□□□□□ -0.21
PTBP1-208	ENST00000585956	IL22RA2	Q969J5	263 aa		13.73	□□□□□ -0.21
PTBP1-208	ENST00000585956	C7orf50	Q9BRJ6	194 aa	Known RBP	13.73	□□□□□ -0.21
PTBP1-208	ENST00000585956	GOLT1B	Q9Y3E0	138 aa		13.73	□□□□□ -0.21
PTBP1-208	ENST00000585956	TRAV8-2	A0A0B4J237	113 aa		13.72	□□□□□ -0.21
PTBP1-208	ENST00000585956	ISLR	O14498	428 aa		13.72	□□□□□ -0.21
PTBP1-208	ENST00000585956	AKAIN1	P0CW23	69 aa		13.72	□□□□□ -0.21
PTBP1-208	ENST00000585956	IAPP	P10997	89 aa		13.72	□□□□□ -0.21
PTBP1-208	ENST00000585956	AZU1	P20160	251 aa		13.72	□□□□□ -0.21
PTBP1-208	ENST00000585956	GATA2	P23769	480 aa	Predicted RBP	13.72	□□□□□ -0.21
PTBP1-208	ENST00000585956	CCR6	P51684	374 aa		13.72	□□□□□ -0.21
PTBP1-208	ENST00000585956	DAD1	P61803	113 aa		13.72	□□□□□ -0.21
PTBP1-208	ENST00000585956	C1orf194	Q5T5A4	169 aa		13.72	□□□□□ -0.21
PTBP1-208	ENST00000585956	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.72	□□□□□ -0.21
PTBP1-208	ENST00000585956	GPX4	P36969	197 aa	Predicted RBP	13.71	□□□□□ -0.21
PTBP1-208	ENST00000585956	SSBP1	Q04837	148 aa	Known RBP	13.71	□□□□□ -0.21
PTBP1-208	ENST00000585956	SPINK13	Q1W4C9	94 aa		13.71	□□□□□ -0.21
PTBP1-208	ENST00000585956	RRN3P1	Q2M238	152 aa		13.71	□□□□□ -0.21
PTBP1-208	ENST00000585956	CLVS1	Q8IUQ0	354 aa	Predicted RBP	13.71	□□□□□ -0.21
PTBP1-208	ENST00000585956	OR8I2	Q8N0Y5	310 aa		13.71	□□□□□ -0.21
PTBP1-208	ENST00000585956	RNF182	Q8N6D2	247 aa		13.71	□□□□□ -0.21
PTBP1-208	ENST00000585956	ZNRF2	Q8NHG8	242 aa		13.71	□□□□□ -0.21
PTBP1-208	ENST00000585956	DOK5	Q9P104	306 aa		13.71	□□□□□ -0.21
PTBP1-208	ENST00000585956		A0A0B4J2A0	478 aa		13.7	□□□□□ -0.22
PTBP1-208	ENST00000585956	TEX48	A0A1B0GUV7	120 aa		13.7	□□□□□ -0.22
PTBP1-208	ENST00000585956	ANKRD20A5P	A0PJZ0	165 aa		13.7	□□□□□ -0.22
PTBP1-208	ENST00000585956	PRSS46	E5RG02	174 aa		13.7	□□□□□ -0.22
PTBP1-208	ENST00000585956	RGS5	O15539	181 aa		13.7	□□□□□ -0.22
PTBP1-208	ENST00000585956	PITX3	O75364	302 aa		13.7	□□□□□ -0.22
PTBP1-208	ENST00000585956	AKR1C4	P17516	323 aa		13.7	□□□□□ -0.22
PTBP1-208	ENST00000585956	EBLN2	Q6P2I7	272 aa		13.7	□□□□□ -0.22
PTBP1-208	ENST00000585956	NOXA1	Q86UR1	476 aa		13.7	□□□□□ -0.22
PTBP1-208	ENST00000585956	BAP18	Q8IXM2	172 aa		13.7	□□□□□ -0.22
PTBP1-208	ENST00000585956	THAP8	Q8NA92	274 aa		13.7	□□□□□ -0.22
PTBP1-208	ENST00000585956	OR11H7	Q8NGC8	314 aa		13.7	□□□□□ -0.22
PTBP1-208	ENST00000585956	SLC35E1	Q96K37	410 aa		13.7	□□□□□ -0.22
PTBP1-208	ENST00000585956	IGF2BP2-AS1	Q96M15	143 aa		13.7	□□□□□ -0.22
PTBP1-208	ENST00000585956	TRGV9	Q99603	122 aa		13.7	□□□□□ -0.22
PTBP1-208	ENST00000585956	RSG1	Q9BU20	258 aa		13.7	□□□□□ -0.22
PTBP1-208	ENST00000585956	MAGT1	Q9H0U3	335 aa		13.7	□□□□□ -0.22
PTBP1-208	ENST00000585956	SLC25A22	Q9H936	323 aa		13.7	□□□□□ -0.22
PTBP1-208	ENST00000585956	SHPK	Q9UHJ6	478 aa		13.7	□□□□□ -0.22
PTBP1-208	ENST00000585956	C16orf90	A8MZG2	172 aa		13.69	□□□□□ -0.22
PTBP1-208	ENST00000585956	NUP62	P37198	522 aa	Predicted RBP	13.69	□□□□□ -0.22
PTBP1-208	ENST00000585956	CNN1	P51911	297 aa	Known RBP	13.69	□□□□□ -0.22
PTBP1-208	ENST00000585956	PPP1R14B	Q96C90	147 aa		13.69	□□□□□ -0.22
PTBP1-208	ENST00000585956	C16orf92	Q96LL3	132 aa		13.69	□□□□□ -0.22
PTBP1-208	ENST00000585956	TRAV12-2	A0A075B6T6	113 aa		13.68	□□□□□ -0.22
PTBP1-208	ENST00000585956	SNRPGP15	A8MWD9	76 aa		13.68	□□□□□ -0.22
PTBP1-208	ENST00000585956	SOHLH1	Q5JUK2	328 aa		13.68	□□□□□ -0.22
PTBP1-208	ENST00000585956	SPATA31B1P	Q5VZV4	182 aa		13.68	□□□□□ -0.22
PTBP1-208	ENST00000585956	OR1S1	Q8NH92	325 aa		13.68	□□□□□ -0.22
PTBP1-208	ENST00000585956	C15orf40	Q8WUR7	153 aa		13.68	□□□□□ -0.22
PTBP1-208	ENST00000585956	PRRT1	Q99946	306 aa		13.68	□□□□□ -0.22
PTBP1-208	ENST00000585956	RPRM	Q9NS64	109 aa		13.68	□□□□□ -0.22
PTBP1-208	ENST00000585956	NBDY	A0A0U1RRE5	68 aa		13.67	□□□□□ -0.22
PTBP1-208	ENST00000585956	ZNF98	A6NK75	572 aa		13.67	□□□□□ -0.22
PTBP1-208	ENST00000585956	CTDSPL	O15194	276 aa		13.67	□□□□□ -0.22
PTBP1-208	ENST00000585956	DEFB130B	P0DP73	79 aa		13.67	□□□□□ -0.22
PTBP1-208	ENST00000585956	DEFB130A	P0DP74	79 aa		13.67	□□□□□ -0.22
PTBP1-208	ENST00000585956	MRPS10	P82664	201 aa	Known RBP	13.67	□□□□□ -0.22
PTBP1-208	ENST00000585956	IL18	Q14116	193 aa		13.67	□□□□□ -0.22
PTBP1-208	ENST00000585956	MAPKAPK5-AS1	Q8N8E1	139 aa		13.67	□□□□□ -0.22
PTBP1-208	ENST00000585956	KRTAP1-5	Q9BYS1	174 aa		13.67	□□□□□ -0.22
PTBP1-208	ENST00000585956	LINC00588	Q9Y4M8	146 aa		13.67	□□□□□ -0.22
PTBP1-208	ENST00000585956	TMEM208	Q9BTX3	173 aa		13.66	□□□□□ -0.22
PTBP1-208	ENST00000585956	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.66	□□□□□ -0.22
PTBP1-208	ENST00000585956	PAIP2B	Q9ULR5	123 aa	Known RBP	13.66	□□□□□ -0.22
PTBP1-208	ENST00000585956	CDK2AP2	O75956	126 aa		13.65	□□□□□ -0.22
PTBP1-208	ENST00000585956	C15orf53	Q8NAA6	179 aa		13.65	□□□□□ -0.22
PTBP1-208	ENST00000585956	DIRAS2	Q96HU8	199 aa		13.65	□□□□□ -0.22
PTBP1-208	ENST00000585956	KCNIP3	Q9Y2W7	256 aa		13.65	□□□□□ -0.22
PTBP1-208	ENST00000585956	TMED3	Q9Y3Q3	217 aa		13.65	□□□□□ -0.22
PTBP1-208	ENST00000585956	NUDT3	O95989	172 aa		13.64	□□□□□ -0.23
PTBP1-208	ENST00000585956	ORM2	P19652	201 aa		13.64	□□□□□ -0.23
PTBP1-208	ENST00000585956	C6orf223	Q8N319	242 aa		13.64	□□□□□ -0.23
PTBP1-208	ENST00000585956	RNF141	Q8WVD5	230 aa		13.64	□□□□□ -0.23
PTBP1-208	ENST00000585956	MCUB	Q9NWR8	336 aa		13.64	□□□□□ -0.23
PTBP1-208	ENST00000585956		F5H768	121 aa		13.63	□□□□□ -0.23
PTBP1-208	ENST00000585956	GALR1	P47211	349 aa		13.63	□□□□□ -0.23
PTBP1-208	ENST00000585956	DYNC2LI1	Q8TCX1	351 aa		13.63	□□□□□ -0.23
PTBP1-208	ENST00000585956	SOST	Q9BQB4	213 aa		13.63	□□□□□ -0.23
PTBP1-208	ENST00000585956	ATG101	Q9BSB4	218 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms