RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 PRR20CP86479 221 aa9.06□□□□□ -0.96
TOP3A-217ENST00000584582 PRR20DP86480 221 aa9.06□□□□□ -0.96
TOP3A-217ENST00000584582 PRR20BP86481 221 aa9.06□□□□□ -0.96
TOP3A-217ENST00000584582 PRR20AP86496 221 aa9.06□□□□□ -0.96
TOP3A-217ENST00000584582 ZNF600Q6ZNG1 722 aa9.06□□□□□ -0.96
TOP3A-217ENST00000584582 FAM168AQ92567 244 aa9.06□□□□□ -0.96
TOP3A-217ENST00000584582 NOL4LQ96MY1 436 aaPredicted RBP9.06□□□□□ -0.96
TOP3A-217ENST00000584582 TXNDC17Q9BRA2 123 aa9.06□□□□□ -0.96
TOP3A-217ENST00000584582 ORM1P02763 201 aa9.06□□□□□ -0.96
TOP3A-217ENST00000584582 RNF224P0DH78 156 aa9.06□□□□□ -0.96
TOP3A-217ENST00000584582 TMEM30BQ3MIR4 351 aa9.06□□□□□ -0.96
TOP3A-217ENST00000584582 PARD6GQ9BYG4 376 aaPredicted RBP9.06□□□□□ -0.96
TOP3A-217ENST00000584582 F2Z2F3 143 aa9.05□□□□□ -0.96
TOP3A-217ENST00000584582 HIST1H1EP10412 219 aaKnown RBP9.05□□□□□ -0.96
TOP3A-217ENST00000584582 BRS3P32247 399 aa9.05□□□□□ -0.96
TOP3A-217ENST00000584582 WFDC3Q8IUB2 231 aa9.05□□□□□ -0.96
TOP3A-217ENST00000584582 VAMP8Q9BV40 100 aa9.05□□□□□ -0.96
TOP3A-217ENST00000584582 TMEM242Q9NWH2 141 aa9.05□□□□□ -0.96
TOP3A-217ENST00000584582 FBXL7Q9UJT9 491 aa9.05□□□□□ -0.96
TOP3A-217ENST00000584582 GPX4P36969 197 aaPredicted RBP9.05□□□□□ -0.96
TOP3A-217ENST00000584582 PMCHL1Q16048 86 aa9.05□□□□□ -0.96
TOP3A-217ENST00000584582 CENPVQ7Z7K6 275 aaPredicted RBP9.05□□□□□ -0.96
TOP3A-217ENST00000584582 ARPC1AQ92747 370 aa9.05□□□□□ -0.96
TOP3A-217ENST00000584582 M0R2Z0 102 aa9.04□□□□□ -0.96
TOP3A-217ENST00000584582 SIAH2O43255 324 aa9.04□□□□□ -0.96
TOP3A-217ENST00000584582 VWC2Q2TAL6 325 aa9.04□□□□□ -0.96
TOP3A-217ENST00000584582 TPTE2P1Q5T6R2 138 aa9.04□□□□□ -0.96
TOP3A-217ENST00000584582 TEX45Q8NA69 505 aa9.04□□□□□ -0.96
TOP3A-217ENST00000584582 STXBP6Q8NFX7 210 aa9.04□□□□□ -0.96
TOP3A-217ENST00000584582 C17orf77Q96MU5 243 aa9.04□□□□□ -0.96
TOP3A-217ENST00000584582 ARL2-SNX15V9GYD0 113 aa9.04□□□□□ -0.96
TOP3A-217ENST00000584582 A0A1B0GV90 55 aa9.04□□□□□ -0.96
TOP3A-217ENST00000584582 FAM106CPP0CH98 169 aa9.04□□□□□ -0.96
TOP3A-217ENST00000584582 CTAG1AP78358 180 aa9.04□□□□□ -0.96
TOP3A-217ENST00000584582 CCDC144NLQ6NUI1 221 aa9.04□□□□□ -0.96
TOP3A-217ENST00000584582 CLEC19AQ6UXS0 136 aa9.04□□□□□ -0.96
TOP3A-217ENST00000584582 MRPL32Q9BYC8 188 aaKnown RBP9.04□□□□□ -0.96
TOP3A-217ENST00000584582 EPDR1Q9UM22 224 aa9.04□□□□□ -0.96
TOP3A-217ENST00000584582 IFITM10A6NMD0 228 aa9.04□□□□□ -0.96
TOP3A-217ENST00000584582 ITGB1BP1O14713 200 aa9.04□□□□□ -0.96
TOP3A-217ENST00000584582 COMPP49747 757 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-217ENST00000584582 MFAP4P55083 255 aa9.04□□□□□ -0.96
TOP3A-217ENST00000584582 SSX8Q7RTT4 187 aa9.04□□□□□ -0.96
TOP3A-217ENST00000584582 NUDT10Q8NFP7 164 aa9.04□□□□□ -0.96
TOP3A-217ENST00000584582 NUDT11Q96G61 164 aa9.04□□□□□ -0.96
TOP3A-217ENST00000584582 CHODLQ9H9P2 273 aa9.04□□□□□ -0.96
TOP3A-217ENST00000584582 C21orf62Q9NYP8 219 aa9.04□□□□□ -0.96
TOP3A-217ENST00000584582 GGCTO75223 188 aaKnown RBP9.03□□□□□ -0.96
TOP3A-217ENST00000584582 FCN3O75636 299 aa9.03□□□□□ -0.96
TOP3A-217ENST00000584582 DDTP30046 118 aa9.03□□□□□ -0.96
TOP3A-217ENST00000584582 PPIFP30405 207 aaKnown RBP9.03□□□□□ -0.96
TOP3A-217ENST00000584582 RUSC1-AS1Q66K80 236 aa9.03□□□□□ -0.96
TOP3A-217ENST00000584582 UNQ6494/PRO21346Q6UXR6 183 aa9.03□□□□□ -0.96
TOP3A-217ENST00000584582 GBGT1Q8N5D6 347 aa9.03□□□□□ -0.96
TOP3A-217ENST00000584582 NRGNQ92686 78 aa9.03□□□□□ -0.96
TOP3A-217ENST00000584582 SLC25A2Q9BXI2 301 aa9.03□□□□□ -0.96
TOP3A-217ENST00000584582 A0A1W2PRE2 83 aa9.03□□□□□ -0.96
TOP3A-217ENST00000584582 IGLC7A0M8Q6 106 aa9.03□□□□□ -0.96
TOP3A-217ENST00000584582 NUPR1O60356 82 aa9.03□□□□□ -0.96
TOP3A-217ENST00000584582 TFPI2P48307 235 aa9.03□□□□□ -0.96
TOP3A-217ENST00000584582 F11RQ9Y624 299 aaKnown RBP9.03□□□□□ -0.96
TOP3A-217ENST00000584582 FLNCQ14315 2725 aa9.03□□□□□ -0.96
TOP3A-217ENST00000584582 TRAV40A0A0B4J280 105 aa9.03□□□□□ -0.96
TOP3A-217ENST00000584582 G3V318 75 aa9.03□□□□□ -0.96
TOP3A-217ENST00000584582 PF4V1P10720 104 aa9.03□□□□□ -0.96
TOP3A-217ENST00000584582 PATE2Q6UY27 113 aa9.03□□□□□ -0.96
TOP3A-217ENST00000584582 RNF125Q96EQ8 232 aa9.03□□□□□ -0.96
TOP3A-217ENST00000584582 PMCHL2Q9BQD1 86 aa9.03□□□□□ -0.96
TOP3A-217ENST00000584582 C1RLQ9NZP8 487 aa9.03□□□□□ -0.96
TOP3A-217ENST00000584582 DIRC3C9JPN6 131 aa9.02□□□□□ -0.96
TOP3A-217ENST00000584582 ZNF138P52744 262 aa9.02□□□□□ -0.96
TOP3A-217ENST00000584582 CR1LQ2VPA4 569 aa9.02□□□□□ -0.96
TOP3A-217ENST00000584582 C3orf36Q3SXR2 165 aa9.02□□□□□ -0.96
TOP3A-217ENST00000584582 WDR73Q6P4I2 378 aa9.02□□□□□ -0.96
TOP3A-217ENST00000584582 Q8TAT8 98 aa9.02□□□□□ -0.96
TOP3A-217ENST00000584582 ATG101Q9BSB4 218 aa9.02□□□□□ -0.96
TOP3A-217ENST00000584582 MCRIP2Q9BUT9 160 aaKnown RBP9.02□□□□□ -0.96
TOP3A-217ENST00000584582 C19orf24Q9BVV8 132 aa9.02□□□□□ -0.96
TOP3A-217ENST00000584582 SLC25A39Q9BZJ4 359 aaPredicted RBP9.02□□□□□ -0.96
TOP3A-217ENST00000584582 A8MWL6 223 aa9.02□□□□□ -0.97
TOP3A-217ENST00000584582 TBL2Q9Y4P3 447 aaKnown RBP9.02□□□□□ -0.97
TOP3A-217ENST00000584582 MAS1LP35410 378 aa9.01□□□□□ -0.97
TOP3A-217ENST00000584582 Q8N7P7 452 aa9.01□□□□□ -0.97
TOP3A-217ENST00000584582 C5orf17Q8NAS9 161 aa9.01□□□□□ -0.97
TOP3A-217ENST00000584582 PRSS3P2Q8NHM4 247 aa9.01□□□□□ -0.97
TOP3A-217ENST00000584582 NEU4Q8WWR8 484 aaPredicted RBP9.01□□□□□ -0.97
TOP3A-217ENST00000584582 C1orf159Q96HA4 380 aa9.01□□□□□ -0.97
TOP3A-217ENST00000584582 PRB1P04280 392 aa9.01□□□□□ -0.97
TOP3A-217ENST00000584582 SAA4P35542 130 aa9.01□□□□□ -0.97
TOP3A-217ENST00000584582 PKIAP61925 76 aa9.01□□□□□ -0.97
TOP3A-217ENST00000584582 NDPQ00604 133 aa9.01□□□□□ -0.97
TOP3A-217ENST00000584582 POU2AF1Q16633 256 aa9.01□□□□□ -0.97
TOP3A-217ENST00000584582 C5orf64Q2M2E5 130 aa9.01□□□□□ -0.97
TOP3A-217ENST00000584582 CYB5R2Q6BCY4 276 aa9.01□□□□□ -0.97
TOP3A-217ENST00000584582 GPR82Q96P67 336 aa9.01□□□□□ -0.97
TOP3A-217ENST00000584582 DUX5Q96PT3 197 aa9.01□□□□□ -0.97
TOP3A-217ENST00000584582 IGKV2-40A0A087WW87 121 aaPredicted RBP9.01□□□□□ -0.97
TOP3A-217ENST00000584582 IGKV2D-40P01614 121 aaPredicted RBP9.01□□□□□ -0.97
TOP3A-217ENST00000584582 ACTL10Q5JWF8 245 aa9.01□□□□□ -0.97
TOP3A-217ENST00000584582 FAM120AOSQ5T036 256 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms