RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 C19orf35Q6ZS72 473 aa7.11□□□□□ -1.27
CASC3-209ENST00000583902 REC114Q7Z4M0 266 aa7.11□□□□□ -1.27
CASC3-209ENST00000583902 RPP25LQ8N5L8 163 aaKnown RBP7.11□□□□□ -1.27
CASC3-209ENST00000583902 SUN5Q8TC36 379 aa7.11□□□□□ -1.27
CASC3-209ENST00000583902 TMEM158Q8WZ71 300 aa7.11□□□□□ -1.27
CASC3-209ENST00000583902 DPF1Q92782 380 aa7.11□□□□□ -1.27
CASC3-209ENST00000583902 GRAMD2BQ96HH9 432 aa7.11□□□□□ -1.27
CASC3-209ENST00000583902 PBDC1Q9BVG4 233 aa7.11□□□□□ -1.27
CASC3-209ENST00000583902 GNB4Q9HAV0 340 aa7.11□□□□□ -1.27
CASC3-209ENST00000583902 RABAC1Q9UI14 185 aa7.11□□□□□ -1.27
CASC3-209ENST00000583902 PUS1Q9Y606 427 aaKnown RBP eCLIP7.11□□□□□ -1.27
CASC3-209ENST00000583902 SVEP1Q4LDE5 3571 aa7.11□□□□□ -1.27
CASC3-209ENST00000583902 A8MWP6 167 aa7.1□□□□□ -1.27
CASC3-209ENST00000583902 LINC01619G3V211 115 aa7.1□□□□□ -1.27
CASC3-209ENST00000583902 IGHV3-48P01763 117 aa7.1□□□□□ -1.27
CASC3-209ENST00000583902 IL4P05112 153 aa7.1□□□□□ -1.27
CASC3-209ENST00000583902 NMBP08949 121 aa7.1□□□□□ -1.27
CASC3-209ENST00000583902 C8orf88P0DMB2 117 aa7.1□□□□□ -1.27
CASC3-209ENST00000583902 RPL7P18124 248 aaKnown RBP7.1□□□□□ -1.27
CASC3-209ENST00000583902 NPPCP23582 126 aa7.1□□□□□ -1.27
CASC3-209ENST00000583902 CRYBB3P26998 211 aa7.1□□□□□ -1.27
CASC3-209ENST00000583902 LYZP61626 148 aa7.1□□□□□ -1.27
CASC3-209ENST00000583902 FAM78BQ5VT40 261 aa7.1□□□□□ -1.27
CASC3-209ENST00000583902 IL34Q6ZMJ4 242 aa7.1□□□□□ -1.27
CASC3-209ENST00000583902 C1QL4Q86Z23 238 aa7.1□□□□□ -1.27
CASC3-209ENST00000583902 OR1B1Q8NGR6 318 aa7.1□□□□□ -1.27
CASC3-209ENST00000583902 FAM213BQ8TBF2 198 aa7.1□□□□□ -1.27
CASC3-209ENST00000583902 RCC1LQ96I51 464 aaKnown RBP7.1□□□□□ -1.27
CASC3-209ENST00000583902 CHRDL1Q9BU40 450 aa7.1□□□□□ -1.27
CASC3-209ENST00000583902 DAZ1Q9NQZ3 744 aaKnown RBP7.1□□□□□ -1.27
CASC3-209ENST00000583902 TMEM167BQ9NRX6 74 aa7.1□□□□□ -1.27
CASC3-209ENST00000583902 CLEC5AQ9NY25 188 aa7.1□□□□□ -1.27
CASC3-209ENST00000583902 TMEM14CQ9P0S9 112 aa7.1□□□□□ -1.27
CASC3-209ENST00000583902 PEMTQ9UBM1 199 aa7.1□□□□□ -1.27
CASC3-209ENST00000583902 IFNA1P01562 189 aa7.09□□□□□ -1.27
CASC3-209ENST00000583902 IGHV3-11P01762 117 aa7.09□□□□□ -1.27
CASC3-209ENST00000583902 STAG3L2P0CL84 134 aa7.09□□□□□ -1.27
CASC3-209ENST00000583902 STAG3L3P0CL85 134 aa7.09□□□□□ -1.27
CASC3-209ENST00000583902 ORM2P19652 201 aa7.09□□□□□ -1.27
CASC3-209ENST00000583902 MYCNOSP40205 109 aa7.09□□□□□ -1.27
CASC3-209ENST00000583902 GUK1Q16774 197 aa7.09□□□□□ -1.27
CASC3-209ENST00000583902 TOMM20LQ6UXN7 152 aa7.09□□□□□ -1.27
CASC3-209ENST00000583902 LINC00305Q7Z4B0 112 aa7.09□□□□□ -1.27
CASC3-209ENST00000583902 BPIFA4PQ86YQ2 179 aa7.09□□□□□ -1.27
CASC3-209ENST00000583902 OR1N2Q8NGR9 330 aa7.09□□□□□ -1.27
CASC3-209ENST00000583902 SFT2D1Q8WV19 159 aa7.09□□□□□ -1.27
CASC3-209ENST00000583902 TMEM37Q8WXS4 190 aa7.09□□□□□ -1.27
CASC3-209ENST00000583902 RAB24Q969Q5 203 aa7.09□□□□□ -1.27
CASC3-209ENST00000583902 TCEAL7Q9BRU2 100 aa7.09□□□□□ -1.27
CASC3-209ENST00000583902 SHANK2-AS3Q9BTD1 123 aa7.09□□□□□ -1.27
CASC3-209ENST00000583902 SLC25A39Q9BZJ4 359 aaPredicted RBP7.09□□□□□ -1.27
CASC3-209ENST00000583902 MANBALQ9NQG1 85 aa7.09□□□□□ -1.27
CASC3-209ENST00000583902 SETD2Q9BYW2 2564 aaPredicted RBP7.09□□□□□ -1.28
CASC3-209ENST00000583902 RAB19A4D1S5 217 aa7.08□□□□□ -1.28
CASC3-209ENST00000583902 MAP1LC3B2A6NCE7 125 aa7.08□□□□□ -1.28
CASC3-209ENST00000583902 H3BRN7 92 aa7.08□□□□□ -1.28
CASC3-209ENST00000583902 M0QZ24 198 aa7.08□□□□□ -1.28
CASC3-209ENST00000583902 ZNF253O75346 499 aa7.08□□□□□ -1.28
CASC3-209ENST00000583902 FHL3Q13643 280 aa7.08□□□□□ -1.28
CASC3-209ENST00000583902 KLF5Q13887 457 aaPredicted RBP7.08□□□□□ -1.28
CASC3-209ENST00000583902 PDE6HQ13956 83 aa7.08□□□□□ -1.28
CASC3-209ENST00000583902 TCTEX1D4Q5JR98 221 aa7.08□□□□□ -1.28
CASC3-209ENST00000583902 FAM122CQ6P4D5 195 aa7.08□□□□□ -1.28
CASC3-209ENST00000583902 LYPD1Q8N2G4 141 aa7.08□□□□□ -1.28
CASC3-209ENST00000583902 ARL6IP6Q8N6S5 226 aa7.08□□□□□ -1.28
CASC3-209ENST00000583902 KLHL30-AS1Q8NEE0 82 aa7.08□□□□□ -1.28
CASC3-209ENST00000583902 OR11H1Q8NG94 326 aa7.08□□□□□ -1.28
CASC3-209ENST00000583902 OR4F17Q8NGA8 305 aa7.08□□□□□ -1.28
CASC3-209ENST00000583902 OR4F4Q96R69 305 aa7.08□□□□□ -1.28
CASC3-209ENST00000583902 MAP1LC3BQ9GZQ8 125 aa7.08□□□□□ -1.28
CASC3-209ENST00000583902 SIGLEC8Q9NYZ4 499 aa7.08□□□□□ -1.28
CASC3-209ENST00000583902 U3KQE9 123 aa7.08□□□□□ -1.28
CASC3-209ENST00000583902 LINC00862A6NCI5 91 aa7.07□□□□□ -1.28
CASC3-209ENST00000583902 HELTA6NFD8 242 aa7.07□□□□□ -1.28
CASC3-209ENST00000583902 ZNF98A6NK75 572 aa7.07□□□□□ -1.28
CASC3-209ENST00000583902 PPP5D1E7EU14 171 aa7.07□□□□□ -1.28
CASC3-209ENST00000583902 IGHV3-23P01764 117 aa7.07□□□□□ -1.28
CASC3-209ENST00000583902 CD28P10747 220 aa7.07□□□□□ -1.28
CASC3-209ENST00000583902 GATA2P23769 480 aaPredicted RBP7.07□□□□□ -1.28
CASC3-209ENST00000583902 HOXD3P31249 432 aaPredicted RBP7.07□□□□□ -1.28
CASC3-209ENST00000583902 GALR1P47211 349 aa7.07□□□□□ -1.28
CASC3-209ENST00000583902 FHITP49789 147 aa7.07□□□□□ -1.28
CASC3-209ENST00000583902 AWAT1Q58HT5 328 aa7.07□□□□□ -1.28
CASC3-209ENST00000583902 KHDC1LQ5JSQ8 128 aa7.07□□□□□ -1.28
CASC3-209ENST00000583902 FAM74A1Q5RGS3 127 aa7.07□□□□□ -1.28
CASC3-209ENST00000583902 SAMD5Q5TGI4 173 aa7.07□□□□□ -1.28
CASC3-209ENST00000583902 UQCC3Q6UW78 93 aa7.07□□□□□ -1.28
CASC3-209ENST00000583902 C10orf99Q6UWK7 81 aa7.07□□□□□ -1.28
CASC3-209ENST00000583902 PATE2Q6UY27 113 aa7.07□□□□□ -1.28
CASC3-209ENST00000583902 EIF4E3Q8N5X7 224 aaKnown RBP7.07□□□□□ -1.28
CASC3-209ENST00000583902 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.07□□□□□ -1.28
CASC3-209ENST00000583902 CITED1Q99966 193 aa7.07□□□□□ -1.28
CASC3-209ENST00000583902 CITED2Q99967 270 aaPredicted RBP7.07□□□□□ -1.28
CASC3-209ENST00000583902 OR51M1Q9H341 326 aa7.07□□□□□ -1.28
CASC3-209ENST00000583902 VSIRQ9H7M9 311 aa7.07□□□□□ -1.28
CASC3-209ENST00000583902 SEPSECSQ9HD40 501 aaKnown RBP7.07□□□□□ -1.28
CASC3-209ENST00000583902 S4R3C0 116 aa7.07□□□□□ -1.28
CASC3-209ENST00000583902 CCL24O00175 119 aa7.06□□□□□ -1.28
CASC3-209ENST00000583902 BUB3O43684 328 aa7.06□□□□□ -1.28
CASC3-209ENST00000583902 HIST1H1EP10412 219 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms