RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 IGHV3-38A0A0C4DH36 116 aa13.19□□□□□ -0.3
CACNA1A-202ENST00000573710 LILRA6Q6PI73 481 aa13.19□□□□□ -0.3
CACNA1A-202ENST00000573710 RNASE6Q93091 150 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-202ENST00000573710 SPTAN1Q13813 2472 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-202ENST00000573710 IGHV4OR15-8A0A075B7B6 117 aa13.19□□□□□ -0.3
CACNA1A-202ENST00000573710 A0A087WW49 117 aa13.19□□□□□ -0.3
CACNA1A-202ENST00000573710 C5orf66Q9H5L9 145 aa13.19□□□□□ -0.3
CACNA1A-202ENST00000573710 TNRC6BQ9UPQ9 1833 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-202ENST00000573710 RPL23P62829 140 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-202ENST00000573710 SLC25A47Q6Q0C1 308 aa13.18□□□□□ -0.3
CACNA1A-202ENST00000573710 RPUSD1Q9UJJ7 312 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-202ENST00000573710 TNRC6CQ9HCJ0 1690 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-202ENST00000573710 A0A0G2JMM0 328 aa13.18□□□□□ -0.3
CACNA1A-202ENST00000573710 A0A1W2PPB8 328 aa13.18□□□□□ -0.3
CACNA1A-202ENST00000573710 A0A1W2PRS3 328 aa13.18□□□□□ -0.3
CACNA1A-202ENST00000573710 KIR3DP1A8MWS1 328 aa13.18□□□□□ -0.3
CACNA1A-202ENST00000573710 D6R8Y8 96 aa13.18□□□□□ -0.3
CACNA1A-202ENST00000573710 C1QTNF9P0C862 333 aa13.18□□□□□ -0.3
CACNA1A-202ENST00000573710 CRLF1O75462 422 aa13.18□□□□□ -0.3
CACNA1A-202ENST00000573710 CA7P43166 264 aa13.18□□□□□ -0.3
CACNA1A-202ENST00000573710 IGHV2OR16-5A0A0B4J2B6 119 aa13.18□□□□□ -0.3
CACNA1A-202ENST00000573710 ASPHD2Q6ICH7 369 aa13.18□□□□□ -0.3
CACNA1A-202ENST00000573710 H3BUX3 64 aa13.18□□□□□ -0.3
CACNA1A-202ENST00000573710 RAMP1O60894 148 aa13.18□□□□□ -0.3
CACNA1A-202ENST00000573710 INAFM2P0DMQ5 153 aa13.18□□□□□ -0.3
CACNA1A-202ENST00000573710 PSG1P11464 419 aa13.18□□□□□ -0.3
CACNA1A-202ENST00000573710 C15orf32Q32M92 178 aa13.18□□□□□ -0.3
CACNA1A-202ENST00000573710 LIMS2Q7Z4I7 341 aa13.18□□□□□ -0.3
CACNA1A-202ENST00000573710 C14orf178Q8N769 122 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-202ENST00000573710 ALS2Q96Q42 1657 aa13.17□□□□□ -0.3
CACNA1A-202ENST00000573710 SAA2-SAA4A0A096LPE2 208 aa13.17□□□□□ -0.3
CACNA1A-202ENST00000573710 A0A1W2PQF6 199 aa13.17□□□□□ -0.3
CACNA1A-202ENST00000573710 SAA2P0DJI9 122 aaPredicted RBP13.17□□□□□ -0.3
CACNA1A-202ENST00000573710 IGHV1-2P23083 117 aa13.17□□□□□ -0.3
CACNA1A-202ENST00000573710 C17orf100A8MU93 164 aa13.17□□□□□ -0.3
CACNA1A-202ENST00000573710 TM4SF5O14894 197 aa13.17□□□□□ -0.3
CACNA1A-202ENST00000573710 SPTSSBQ8NFR3 76 aa13.17□□□□□ -0.3
CACNA1A-202ENST00000573710 SLC25A38Q96DW6 304 aa13.17□□□□□ -0.3
CACNA1A-202ENST00000573710 TIMM21Q9BVV7 248 aa13.17□□□□□ -0.3
CACNA1A-202ENST00000573710 LINC00587B1AMM8 73 aa13.17□□□□□ -0.3
CACNA1A-202ENST00000573710 SAP25Q8TEE9 199 aa13.17□□□□□ -0.3
CACNA1A-202ENST00000573710 IGKV2D-24A0A075B6R9 120 aa13.17□□□□□ -0.3
CACNA1A-202ENST00000573710 UBL5Q9BZL1 73 aa13.17□□□□□ -0.3
CACNA1A-202ENST00000573710 OTORQ9NRC9 128 aa13.17□□□□□ -0.3
CACNA1A-202ENST00000573710 XCL2Q9UBD3 114 aa13.17□□□□□ -0.3
CACNA1A-202ENST00000573710 HELZP42694 1942 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-202ENST00000573710 SMDT1Q9H4I9 107 aa13.16□□□□□ -0.3
CACNA1A-202ENST00000573710 PATJQ8NI35 1801 aa13.16□□□□□ -0.3
CACNA1A-202ENST00000573710 RAMP3O60896 148 aa13.16□□□□□ -0.3
CACNA1A-202ENST00000573710 C1QCP02747 245 aa13.16□□□□□ -0.3
CACNA1A-202ENST00000573710 FAM90A2PQ658T7 463 aa13.16□□□□□ -0.3
CACNA1A-202ENST00000573710 C2orf16Q68DN1 1984 aa13.16□□□□□ -0.3
CACNA1A-202ENST00000573710 LRCOL1A6NCL2 159 aa13.16□□□□□ -0.3
CACNA1A-202ENST00000573710 LINC01465Q8N7H1 131 aa13.16□□□□□ -0.3
CACNA1A-202ENST00000573710 SIGLEC9Q9Y336 463 aa13.16□□□□□ -0.3
CACNA1A-202ENST00000573710 PMS2P5A8MQ11 134 aa13.16□□□□□ -0.3
CACNA1A-202ENST00000573710 VCYO14598 125 aa13.16□□□□□ -0.3
CACNA1A-202ENST00000573710 NCOA6Q14686 2063 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-202ENST00000573710 SYNJ2BPP57105 145 aa13.15□□□□□ -0.3
CACNA1A-202ENST00000573710 Q8TAT8 98 aa13.15□□□□□ -0.3
CACNA1A-202ENST00000573710 IGF2BP2-AS1Q96M15 143 aa13.15□□□□□ -0.3
CACNA1A-202ENST00000573710 FAM90A26D6RGX4 464 aa13.15□□□□□ -0.3
CACNA1A-202ENST00000573710 SELLP14151 372 aa13.15□□□□□ -0.3
CACNA1A-202ENST00000573710 SLC25A16P16260 332 aa13.15□□□□□ -0.3
CACNA1A-202ENST00000573710 PSG8Q9UQ74 426 aa13.15□□□□□ -0.3
CACNA1A-202ENST00000573710 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-202ENST00000573710 PSPNO60542 156 aa13.15□□□□□ -0.3
CACNA1A-202ENST00000573710 RNASE13Q5GAN3 156 aaKnown RBP13.15□□□□□ -0.3
CACNA1A-202ENST00000573710 RCC1LQ96I51 464 aaKnown RBP13.15□□□□□ -0.3
CACNA1A-202ENST00000573710 RNF114Q9Y508 228 aa13.15□□□□□ -0.3
CACNA1A-202ENST00000573710 USF3Q68DE3 2245 aa13.15□□□□□ -0.3
CACNA1A-202ENST00000573710 KIAA1549Q9HCM3 1950 aa13.15□□□□□ -0.3
CACNA1A-202ENST00000573710 DKK1O94907 266 aa13.15□□□□□ -0.3
CACNA1A-202ENST00000573710 ZNF660Q6AZW8 331 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-202ENST00000573710 RNF223E7ERA6 249 aa13.15□□□□□ -0.3
CACNA1A-202ENST00000573710 TMEM187Q14656 261 aa13.15□□□□□ -0.3
CACNA1A-202ENST00000573710 AHDC1Q5TGY3 1603 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-202ENST00000573710 MLNRO43193 412 aa13.15□□□□□ -0.31
CACNA1A-202ENST00000573710 IL17RELQ6ZVW7 336 aa13.15□□□□□ -0.31
CACNA1A-202ENST00000573710 ZNF319Q9P2F9 582 aa13.14□□□□□ -0.31
CACNA1A-202ENST00000573710 PRSS29PA6NIE9 313 aa13.14□□□□□ -0.31
CACNA1A-202ENST00000573710 C12orf77C9JDV5 145 aa13.14□□□□□ -0.31
CACNA1A-202ENST00000573710 CRYGCP07315 174 aa13.14□□□□□ -0.31
CACNA1A-202ENST00000573710 ANGP03950 147 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-202ENST00000573710 C9orf106Q8NAJ2 232 aa13.14□□□□□ -0.31
CACNA1A-202ENST00000573710 DANCRP0C864 163 aa13.14□□□□□ -0.31
CACNA1A-202ENST00000573710 GUSBP1Q15486 140 aa13.14□□□□□ -0.31
CACNA1A-202ENST00000573710 CEACAM1P13688 526 aa13.13□□□□□ -0.31
CACNA1A-202ENST00000573710 BMPERQ8N8U9 685 aa13.13□□□□□ -0.31
CACNA1A-202ENST00000573710 ADAMTSL5Q6ZMM2 481 aa13.13□□□□□ -0.31
CACNA1A-202ENST00000573710 AQP3Q92482 292 aa13.13□□□□□ -0.31
CACNA1A-202ENST00000573710 E9PQ18 207 aa13.13□□□□□ -0.31
CACNA1A-202ENST00000573710 IGKV1-5P01602 117 aa13.13□□□□□ -0.31
CACNA1A-202ENST00000573710 GAGE7O76087 117 aa13.13□□□□□ -0.31
CACNA1A-202ENST00000573710 GAGE12FP0CL80 117 aa13.13□□□□□ -0.31
CACNA1A-202ENST00000573710 GAGE12GP0CL81 117 aa13.13□□□□□ -0.31
CACNA1A-202ENST00000573710 GAGE12IP0CL82 117 aa13.13□□□□□ -0.31
CACNA1A-202ENST00000573710 ARFGEF1Q9Y6D6 1849 aa13.12□□□□□ -0.31
CACNA1A-202ENST00000573710 OVOL2Q9BRP0 275 aa13.12□□□□□ -0.31
CACNA1A-202ENST00000573710 MYMXA0A1B0GTQ4 84 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms