RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 NPCDR1Q9BY65 106 aa11.37□□□□□ -0.59
RAB40B-203ENST00000570676 YPEL3P61236 119 aaPredicted RBP11.36□□□□□ -0.59
RAB40B-203ENST00000570676 EIF5AP63241 154 aaKnown RBP11.36□□□□□ -0.59
RAB40B-203ENST00000570676 HAGHQ16775 308 aa11.36□□□□□ -0.59
RAB40B-203ENST00000570676 CITED4Q96RK1 184 aa11.36□□□□□ -0.59
RAB40B-203ENST00000570676 RSG1Q9BU20 258 aa11.36□□□□□ -0.59
RAB40B-203ENST00000570676 GGTLC1Q9BX51 225 aa11.36□□□□□ -0.59
RAB40B-203ENST00000570676 EDA2RQ9HAV5 297 aa11.36□□□□□ -0.59
RAB40B-203ENST00000570676 SLC45A2Q9UMX9 530 aa11.36□□□□□ -0.59
RAB40B-203ENST00000570676 NBEAL2Q6ZNJ1 2754 aa11.35□□□□□ -0.59
RAB40B-203ENST00000570676 IGHV3-35A0A0C4DH35 117 aa11.35□□□□□ -0.59
RAB40B-203ENST00000570676 C17orf112F2Z3M2 114 aa11.35□□□□□ -0.59
RAB40B-203ENST00000570676 CD7P09564 240 aa11.35□□□□□ -0.59
RAB40B-203ENST00000570676 RD3LP0DJH9 198 aa11.35□□□□□ -0.59
RAB40B-203ENST00000570676 GATA2P23769 480 aaPredicted RBP11.35□□□□□ -0.59
RAB40B-203ENST00000570676 CD81P60033 236 aa11.35□□□□□ -0.59
RAB40B-203ENST00000570676 SELENOTP62341 195 aa11.35□□□□□ -0.59
RAB40B-203ENST00000570676 RELQ04864 619 aaPredicted RBP11.35□□□□□ -0.59
RAB40B-203ENST00000570676 CASC10Q5T4H9 136 aa11.35□□□□□ -0.59
RAB40B-203ENST00000570676 LINC00322Q6ZN03 302 aaPredicted RBP11.35□□□□□ -0.59
RAB40B-203ENST00000570676 ZNF600Q6ZNG1 722 aa11.35□□□□□ -0.59
RAB40B-203ENST00000570676 SLC51BQ86UW2 128 aa11.35□□□□□ -0.59
RAB40B-203ENST00000570676 Q8WTZ3 238 aa11.35□□□□□ -0.59
RAB40B-203ENST00000570676 SPATA25Q9BR10 227 aa11.35□□□□□ -0.59
RAB40B-203ENST00000570676 WFDC10AQ9H1F0 79 aa11.35□□□□□ -0.59
RAB40B-203ENST00000570676 ARV1Q9H2C2 271 aa11.35□□□□□ -0.59
RAB40B-203ENST00000570676 TECRQ9NZ01 308 aaKnown RBP11.35□□□□□ -0.59
RAB40B-203ENST00000570676 TOMM40O96008 361 aa11.34□□□□□ -0.59
RAB40B-203ENST00000570676 PSG1P11464 419 aa11.34□□□□□ -0.59
RAB40B-203ENST00000570676 TPT1P13693 172 aaKnown RBP11.34□□□□□ -0.59
RAB40B-203ENST00000570676 CBLN1P23435 193 aa11.34□□□□□ -0.59
RAB40B-203ENST00000570676 ATP6V0CP27449 155 aa11.34□□□□□ -0.59
RAB40B-203ENST00000570676 MIC13Q5XKP0 118 aa11.34□□□□□ -0.59
RAB40B-203ENST00000570676 UNQ9165/PRO28630Q6UXU0 137 aa11.34□□□□□ -0.59
RAB40B-203ENST00000570676 TMEM182Q6ZP80 229 aaPredicted RBP11.34□□□□□ -0.59
RAB40B-203ENST00000570676 BPIFCQ8NFQ6 507 aa11.34□□□□□ -0.59
RAB40B-203ENST00000570676 STOML3Q8TAV4 291 aa11.34□□□□□ -0.59
RAB40B-203ENST00000570676 GNPNAT1Q96EK6 184 aaPredicted RBP11.34□□□□□ -0.59
RAB40B-203ENST00000570676 GINS3Q9BRX5 216 aa11.34□□□□□ -0.59
RAB40B-203ENST00000570676 SH3BGRL3Q9H299 93 aa11.34□□□□□ -0.59
RAB40B-203ENST00000570676 KCNIP2Q9NS61 270 aa11.34□□□□□ -0.59
RAB40B-203ENST00000570676 MLXQ9UH92 298 aa11.34□□□□□ -0.59
RAB40B-203ENST00000570676 RFNGQ9Y644 331 aa11.34□□□□□ -0.59
RAB40B-203ENST00000570676 SELENOKQ9Y6D0 94 aa11.34□□□□□ -0.59
RAB40B-203ENST00000570676 PXMP4Q9Y6I8 212 aa11.34□□□□□ -0.59
RAB40B-203ENST00000570676 YIF1AO95070 293 aa11.33□□□□□ -0.6
RAB40B-203ENST00000570676 LINC00869P0C866 280 aa11.33□□□□□ -0.6
RAB40B-203ENST00000570676 RPL29P47914 159 aaKnown RBP11.33□□□□□ -0.6
RAB40B-203ENST00000570676 BAP18Q8IXM2 172 aa11.33□□□□□ -0.6
RAB40B-203ENST00000570676 TMEM61Q8N0U2 210 aa11.33□□□□□ -0.6
RAB40B-203ENST00000570676 STPG3Q8N7X2 389 aa11.33□□□□□ -0.6
RAB40B-203ENST00000570676 OR51G1Q8NGK1 321 aa11.33□□□□□ -0.6
RAB40B-203ENST00000570676 ZNF414Q96IQ9 312 aa11.33□□□□□ -0.6
RAB40B-203ENST00000570676 TUBA4BQ9H853 241 aa11.33□□□□□ -0.6
RAB40B-203ENST00000570676 TIMM9Q9Y5J7 89 aa11.33□□□□□ -0.6
RAB40B-203ENST00000570676 PUS1Q9Y606 427 aaKnown RBP eCLIP11.33□□□□□ -0.6
RAB40B-203ENST00000570676 NDUFA4O00483 81 aa11.32□□□□□ -0.6
RAB40B-203ENST00000570676 PRR20EP86478 221 aa11.32□□□□□ -0.6
RAB40B-203ENST00000570676 PRR20CP86479 221 aa11.32□□□□□ -0.6
RAB40B-203ENST00000570676 PRR20DP86480 221 aa11.32□□□□□ -0.6
RAB40B-203ENST00000570676 PRR20BP86481 221 aa11.32□□□□□ -0.6
RAB40B-203ENST00000570676 PRR20AP86496 221 aa11.32□□□□□ -0.6
RAB40B-203ENST00000570676 FAM106AQ4KMX7 169 aa11.32□□□□□ -0.6
RAB40B-203ENST00000570676 TOMM20LQ6UXN7 152 aa11.32□□□□□ -0.6
RAB40B-203ENST00000570676 ST8SIA2Q92186 375 aa11.32□□□□□ -0.6
RAB40B-203ENST00000570676 PSMG3Q9BT73 122 aaPredicted RBP11.32□□□□□ -0.6
RAB40B-203ENST00000570676 SLC25A32Q9H2D1 315 aa11.32□□□□□ -0.6
RAB40B-203ENST00000570676 SLC39A9Q9NUM3 307 aa11.32□□□□□ -0.6
RAB40B-203ENST00000570676 ZNF320A2RRD8 509 aa11.31□□□□□ -0.6
RAB40B-203ENST00000570676 CFDP00746 253 aaPredicted RBP11.31□□□□□ -0.6
RAB40B-203ENST00000570676 IL4P05112 153 aa11.31□□□□□ -0.6
RAB40B-203ENST00000570676 C8orf88P0DMB2 117 aa11.31□□□□□ -0.6
RAB40B-203ENST00000570676 SPP1P10451 314 aa11.31□□□□□ -0.6
RAB40B-203ENST00000570676 LYZP61626 148 aa11.31□□□□□ -0.6
RAB40B-203ENST00000570676 B2MP61769 119 aa11.31□□□□□ -0.6
RAB40B-203ENST00000570676 GUCA2BQ16661 112 aa11.31□□□□□ -0.6
RAB40B-203ENST00000570676 TM4SF20Q53R12 229 aa11.31□□□□□ -0.6
RAB40B-203ENST00000570676 FFAR4Q5NUL3 377 aa11.31□□□□□ -0.6
RAB40B-203ENST00000570676 DEFB125Q8N687 156 aa11.31□□□□□ -0.6
RAB40B-203ENST00000570676 OR2G3Q8NGZ4 309 aa11.31□□□□□ -0.6
RAB40B-203ENST00000570676 TMEM190Q8WZ59 177 aa11.31□□□□□ -0.6
RAB40B-203ENST00000570676 RNF125Q96EQ8 232 aa11.31□□□□□ -0.6
RAB40B-203ENST00000570676 PBDC1Q9BVG4 233 aa11.31□□□□□ -0.6
RAB40B-203ENST00000570676 RETNQ9HD89 108 aa11.31□□□□□ -0.6
RAB40B-203ENST00000570676 DOK5Q9P104 306 aa11.31□□□□□ -0.6
RAB40B-203ENST00000570676 STARD9Q9P2P6 4700 aa11.31□□□□□ -0.6
RAB40B-203ENST00000570676 IGHV3OR16-8A0A075B7F1 116 aa11.3□□□□□ -0.6
RAB40B-203ENST00000570676 RBMY1BA6NDE4 496 aaKnown RBP11.3□□□□□ -0.6
RAB40B-203ENST00000570676 RBMY1EA6NEQ0 496 aaKnown RBP11.3□□□□□ -0.6
RAB40B-203ENST00000570676 RBMY1DP0C7P1 496 aaKnown RBP11.3□□□□□ -0.6
RAB40B-203ENST00000570676 ORM2P19652 201 aa11.3□□□□□ -0.6
RAB40B-203ENST00000570676 ELLP55199 621 aaPredicted RBP11.3□□□□□ -0.6
RAB40B-203ENST00000570676 Q6ZRG5 221 aa11.3□□□□□ -0.6
RAB40B-203ENST00000570676 TMED6Q8WW62 240 aa11.3□□□□□ -0.6
RAB40B-203ENST00000570676 C20orf24Q9BUV8 137 aa11.3□□□□□ -0.6
RAB40B-203ENST00000570676 SRD5A3Q9H8P0 318 aa11.3□□□□□ -0.6
RAB40B-203ENST00000570676 ZFAND3Q9H8U3 227 aa11.3□□□□□ -0.6
RAB40B-203ENST00000570676 DYNC2H1Q8NCM8 4307 aaKnown RBP11.3□□□□□ -0.6
RAB40B-203ENST00000570676 OR11H12B2RN74 326 aa11.29□□□□□ -0.6
RAB40B-203ENST00000570676 COX7A2P2O60397 106 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms