RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 DLK1P80370 383 aa12.24□□□□□ -0.45
USB1-211ENST00000565662 PMS2P11Q13670 270 aa12.24□□□□□ -0.45
USB1-211ENST00000565662 IAH1Q2TAA2 248 aaPredicted RBP12.24□□□□□ -0.45
USB1-211ENST00000565662 PXDC1Q5TGL8 231 aa12.24□□□□□ -0.45
USB1-211ENST00000565662 FOXI2Q6ZQN5 318 aa12.24□□□□□ -0.45
USB1-211ENST00000565662 ACOT7LQ6ZUV0 252 aa12.24□□□□□ -0.45
USB1-211ENST00000565662 OR10P1Q8NGE3 313 aa12.24□□□□□ -0.45
USB1-211ENST00000565662 SDHCQ99643 169 aaPredicted RBP12.24□□□□□ -0.45
USB1-211ENST00000565662 GGACTQ9BVM4 153 aa12.24□□□□□ -0.45
USB1-211ENST00000565662 HLA-DRB4X5D2U9 266 aa12.24□□□□□ -0.45
USB1-211ENST00000565662 SSSCA1O60232 199 aa12.23□□□□□ -0.45
USB1-211ENST00000565662 ADAP1O75689 374 aa12.23□□□□□ -0.45
USB1-211ENST00000565662 MZT2BQ6NZ67 158 aa12.23□□□□□ -0.45
USB1-211ENST00000565662 NPVFQ9HCQ7 196 aa12.23□□□□□ -0.45
USB1-211ENST00000565662 RYR3Q15413 4870 aa12.22□□□□□ -0.45
USB1-211ENST00000565662 TENM2Q9NT68 2774 aa12.22□□□□□ -0.45
USB1-211ENST00000565662 TEX48A0A1B0GUV7 120 aa12.22□□□□□ -0.45
USB1-211ENST00000565662 ANXA7P20073 488 aaKnown RBP12.22□□□□□ -0.45
USB1-211ENST00000565662 POLR2GP62487 172 aaKnown RBP eCLIP12.22□□□□□ -0.45
USB1-211ENST00000565662 PHLDA1Q8WV24 401 aaPredicted RBP12.22□□□□□ -0.45
USB1-211ENST00000565662 RPRMQ9NS64 109 aa12.22□□□□□ -0.45
USB1-211ENST00000565662 TBC1D24Q9ULP9 559 aa12.22□□□□□ -0.45
USB1-211ENST00000565662 FLVCR2Q9UPI3 526 aa12.22□□□□□ -0.45
USB1-211ENST00000565662 IGKV1OR2-108A0A075B7D4 117 aa12.21□□□□□ -0.45
USB1-211ENST00000565662 LINC00854A0A1B0GVQ3 168 aa12.21□□□□□ -0.45
USB1-211ENST00000565662 SMCO3A2RU48 225 aa12.21□□□□□ -0.45
USB1-211ENST00000565662 H3BMM0 161 aa12.21□□□□□ -0.45
USB1-211ENST00000565662 H3BP45 60 aa12.21□□□□□ -0.45
USB1-211ENST00000565662 K7EPK0 472 aa12.21□□□□□ -0.45
USB1-211ENST00000565662 TCRBP04435 133 aa12.21□□□□□ -0.45
USB1-211ENST00000565662 IL5P05113 134 aa12.21□□□□□ -0.45
USB1-211ENST00000565662 RPL7P18124 248 aaKnown RBP12.21□□□□□ -0.45
USB1-211ENST00000565662 PVALBP20472 110 aaPredicted RBP12.21□□□□□ -0.45
USB1-211ENST00000565662 EBLN2Q6P2I7 272 aa12.21□□□□□ -0.45
USB1-211ENST00000565662 TMEM14EPQ6UXP3 125 aa12.21□□□□□ -0.45
USB1-211ENST00000565662 ZBTB8BQ8NAP8 495 aaPredicted RBP12.21□□□□□ -0.45
USB1-211ENST00000565662 LINC00476Q8WZB0 136 aa12.21□□□□□ -0.45
USB1-211ENST00000565662 DYNC2H1Q8NCM8 4307 aaKnown RBP12.2□□□□□ -0.46
USB1-211ENST00000565662 TMEM189A5PLL7 270 aa12.2□□□□□ -0.46
USB1-211ENST00000565662 KNCNA6PVL3 124 aa12.2□□□□□ -0.46
USB1-211ENST00000565662 L7N2F9 121 aa12.2□□□□□ -0.46
USB1-211ENST00000565662 SCGB1D2O95969 90 aa12.2□□□□□ -0.46
USB1-211ENST00000565662 PLP1P60201 277 aa12.2□□□□□ -0.46
USB1-211ENST00000565662 VAMP2P63027 116 aa12.2□□□□□ -0.46
USB1-211ENST00000565662 OR2F1Q13607 317 aa12.2□□□□□ -0.46
USB1-211ENST00000565662 TEPPQ6URK8 271 aa12.2□□□□□ -0.46
USB1-211ENST00000565662 CYP2G1PQ6ZSU1 146 aa12.2□□□□□ -0.46
USB1-211ENST00000565662 ZNF546Q86UE3 836 aa12.2□□□□□ -0.46
USB1-211ENST00000565662 Q8NAQ8 132 aa12.2□□□□□ -0.46
USB1-211ENST00000565662 ZNF431Q8TF32 576 aaPredicted RBP12.2□□□□□ -0.46
USB1-211ENST00000565662 WDR12Q9GZL7 423 aaKnown RBP12.2□□□□□ -0.46
USB1-211ENST00000565662 SAV1Q9H4B6 383 aaPredicted RBP12.2□□□□□ -0.46
USB1-211ENST00000565662 SMIM9A6NGZ8 99 aa12.19□□□□□ -0.46
USB1-211ENST00000565662 ZNF98A6NK75 572 aa12.19□□□□□ -0.46
USB1-211ENST00000565662 AMBPP02760 352 aa12.19□□□□□ -0.46
USB1-211ENST00000565662 PAX9P55771 341 aa12.19□□□□□ -0.46
USB1-211ENST00000565662 RAB31Q13636 194 aa12.19□□□□□ -0.46
USB1-211ENST00000565662 C16orf92Q96LL3 132 aa12.19□□□□□ -0.46
USB1-211ENST00000565662 NEU1Q99519 415 aa12.19□□□□□ -0.46
USB1-211ENST00000565662 NUDT15Q9NV35 164 aa12.19□□□□□ -0.46
USB1-211ENST00000565662 HIGD1AQ9Y241 93 aa12.19□□□□□ -0.46
USB1-211ENST00000565662 FAM240BA0A1B0GVZ2 78 aa12.18□□□□□ -0.46
USB1-211ENST00000565662 SOCS3O14543 225 aa12.18□□□□□ -0.46
USB1-211ENST00000565662 HYPMO75409 117 aa12.18□□□□□ -0.46
USB1-211ENST00000565662 ORM2P19652 201 aa12.18□□□□□ -0.46
USB1-211ENST00000565662 C4BPBP20851 252 aa12.18□□□□□ -0.46
USB1-211ENST00000565662 C2CD4CQ8TF44 421 aa12.18□□□□□ -0.46
USB1-211ENST00000565662 GSKIPQ9P0R6 139 aa12.18□□□□□ -0.46
USB1-211ENST00000565662 PLA2G10O15496 165 aa12.17□□□□□ -0.46
USB1-211ENST00000565662 LINC00869P0C866 280 aa12.17□□□□□ -0.46
USB1-211ENST00000565662 CXCL2P19875 107 aa12.17□□□□□ -0.46
USB1-211ENST00000565662 CSNK1G2-AS1Q8NCQ2 148 aa12.17□□□□□ -0.46
USB1-211ENST00000565662 LINC00052Q96N35 136 aa12.17□□□□□ -0.46
USB1-211ENST00000565662 SLC25A22Q9H936 323 aa12.17□□□□□ -0.46
USB1-211ENST00000565662 AGRNO00468 2067 aa12.16□□□□□ -0.46
USB1-211ENST00000565662 IGHV4-28A0A0C4DH34 117 aa12.16□□□□□ -0.46
USB1-211ENST00000565662 PMS2P5A8MQ11 134 aa12.16□□□□□ -0.46
USB1-211ENST00000565662 H3BRN7 92 aa12.16□□□□□ -0.46
USB1-211ENST00000565662 DEDDO75618 318 aa12.16□□□□□ -0.46
USB1-211ENST00000565662 DUSP14O95147 198 aaKnown RBP12.16□□□□□ -0.46
USB1-211ENST00000565662 GIG44P09565 113 aaPredicted RBP12.16□□□□□ -0.46
USB1-211ENST00000565662 H2AFB2P0C5Z0 115 aa12.16□□□□□ -0.46
USB1-211ENST00000565662 METTL15P1P0C7V9 234 aa12.16□□□□□ -0.46
USB1-211ENST00000565662 C12orf45Q8N5I9 185 aaPredicted RBP12.16□□□□□ -0.46
USB1-211ENST00000565662 SHANK2-AS3Q9BTD1 123 aa12.16□□□□□ -0.46
USB1-211ENST00000565662 SLC25A39Q9BZJ4 359 aaPredicted RBP12.16□□□□□ -0.46
USB1-211ENST00000565662 SLC25A32Q9H2D1 315 aa12.16□□□□□ -0.46
USB1-211ENST00000565662 GPN1Q9HCN4 374 aaPredicted RBP12.16□□□□□ -0.46
USB1-211ENST00000565662 CLEC5AQ9NY25 188 aa12.16□□□□□ -0.46
USB1-211ENST00000565662 RCL1Q9Y2P8 373 aaKnown RBP12.16□□□□□ -0.46
USB1-211ENST00000565662 ELOA3CA0A087WX78 387 aaPredicted RBP12.15□□□□□ -0.46
USB1-211ENST00000565662 C5orf51A6NDU8 294 aa12.15□□□□□ -0.46
USB1-211ENST00000565662 GOSR2O14653 212 aa12.15□□□□□ -0.46
USB1-211ENST00000565662 B2MP61769 119 aa12.15□□□□□ -0.46
USB1-211ENST00000565662 HBG1P69891 147 aa12.15□□□□□ -0.46
USB1-211ENST00000565662 HBG2P69892 147 aa12.15□□□□□ -0.46
USB1-211ENST00000565662 EWSR1Q01844 656 aaKnown RBP eCLIP12.15□□□□□ -0.46
USB1-211ENST00000565662 ASAH1Q13510 395 aa12.15□□□□□ -0.46
USB1-211ENST00000565662 LGALS9CQ6DKI2 356 aa12.15□□□□□ -0.46
USB1-211ENST00000565662 GSG1LQ6UXU4 331 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms