RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 ARL3P36405 182 aa9.95□□□□□ -0.82
SPG7-209ENST00000564047 KRTAP10-3P60369 221 aa9.95□□□□□ -0.82
SPG7-209ENST00000564047 DEFA6Q01524 100 aa9.95□□□□□ -0.82
SPG7-209ENST00000564047 ZNF90Q03938 601 aa9.95□□□□□ -0.82
SPG7-209ENST00000564047 KHDC3LQ587J8 217 aa9.95□□□□□ -0.82
SPG7-209ENST00000564047 TMEM41BQ5BJD5 291 aa9.95□□□□□ -0.82
SPG7-209ENST00000564047 KHDC1LQ5JSQ8 128 aa9.95□□□□□ -0.82
SPG7-209ENST00000564047 C11orf44Q8N8P7 122 aa9.95□□□□□ -0.82
SPG7-209ENST00000564047 OR5B12Q96R08 314 aa9.95□□□□□ -0.82
SPG7-209ENST00000564047 CITED2Q99967 270 aaPredicted RBP9.95□□□□□ -0.82
SPG7-209ENST00000564047 RSG1Q9BU20 258 aa9.95□□□□□ -0.82
SPG7-209ENST00000564047 CHRDL1Q9BU40 450 aa9.95□□□□□ -0.82
SPG7-209ENST00000564047 SMCO4Q9NRQ5 59 aa9.95□□□□□ -0.82
SPG7-209ENST00000564047 PPP5D1E7EU14 171 aa9.94□□□□□ -0.82
SPG7-209ENST00000564047 GGCTO75223 188 aaKnown RBP9.94□□□□□ -0.82
SPG7-209ENST00000564047 TOMM40O96008 361 aa9.94□□□□□ -0.82
SPG7-209ENST00000564047 TRBV12-3P01733 135 aa9.94□□□□□ -0.82
SPG7-209ENST00000564047 SRP19P09132 144 aaKnown RBP9.94□□□□□ -0.82
SPG7-209ENST00000564047 RD3LP0DJH9 198 aa9.94□□□□□ -0.82
SPG7-209ENST00000564047 PRR20EP86478 221 aa9.94□□□□□ -0.82
SPG7-209ENST00000564047 PRR20CP86479 221 aa9.94□□□□□ -0.82
SPG7-209ENST00000564047 PRR20DP86480 221 aa9.94□□□□□ -0.82
SPG7-209ENST00000564047 PRR20BP86481 221 aa9.94□□□□□ -0.82
SPG7-209ENST00000564047 PRR20AP86496 221 aa9.94□□□□□ -0.82
SPG7-209ENST00000564047 RELQ04864 619 aaPredicted RBP9.94□□□□□ -0.82
SPG7-209ENST00000564047 RHEBQ15382 184 aa9.94□□□□□ -0.82
SPG7-209ENST00000564047 ZNF600Q6ZNG1 722 aa9.94□□□□□ -0.82
SPG7-209ENST00000564047 Q8WTZ3 238 aa9.94□□□□□ -0.82
SPG7-209ENST00000564047 TUBA4BQ9H853 241 aa9.94□□□□□ -0.82
SPG7-209ENST00000564047 RFNGQ9Y644 331 aa9.94□□□□□ -0.82
SPG7-209ENST00000564047 LOC102723971A0A1B0GUV8 181 aa9.93□□□□□ -0.82
SPG7-209ENST00000564047 BMPR1BO00238 502 aa9.93□□□□□ -0.82
SPG7-209ENST00000564047 IFNA1P01562 189 aa9.93□□□□□ -0.82
SPG7-209ENST00000564047 LINC00869P0C866 280 aa9.93□□□□□ -0.82
SPG7-209ENST00000564047 PSG1P11464 419 aa9.93□□□□□ -0.82
SPG7-209ENST00000564047 CCL20P78556 96 aa9.93□□□□□ -0.82
SPG7-209ENST00000564047 FLI1Q01543 452 aaPredicted RBP9.93□□□□□ -0.82
SPG7-209ENST00000564047 ICAM4Q14773 271 aa9.93□□□□□ -0.82
SPG7-209ENST00000564047 PRR31Q5SQ13 230 aa9.93□□□□□ -0.82
SPG7-209ENST00000564047 MIC13Q5XKP0 118 aa9.93□□□□□ -0.82
SPG7-209ENST00000564047 FAM122CQ6P4D5 195 aa9.93□□□□□ -0.82
SPG7-209ENST00000564047 NDUFA11Q86Y39 141 aa9.93□□□□□ -0.82
SPG7-209ENST00000564047 STPG3Q8N7X2 389 aa9.93□□□□□ -0.82
SPG7-209ENST00000564047 C15orf54Q8N8G6 183 aa9.93□□□□□ -0.82
SPG7-209ENST00000564047 KLHL30-AS1Q8NEE0 82 aa9.93□□□□□ -0.82
SPG7-209ENST00000564047 OR51G1Q8NGK1 321 aa9.93□□□□□ -0.82
SPG7-209ENST00000564047 SFT2D1Q8WV19 159 aa9.93□□□□□ -0.82
SPG7-209ENST00000564047 RPRMQ9NS64 109 aa9.93□□□□□ -0.82
SPG7-209ENST00000564047 SLC39A9Q9NUM3 307 aa9.93□□□□□ -0.82
SPG7-209ENST00000564047 PXMP4Q9Y6I8 212 aa9.93□□□□□ -0.82
SPG7-209ENST00000564047 VWFP04275 2813 aa9.93□□□□□ -0.82
SPG7-209ENST00000564047 OR2C1O95371 312 aa9.92□□□□□ -0.82
SPG7-209ENST00000564047 GATA2P23769 480 aaPredicted RBP9.92□□□□□ -0.82
SPG7-209ENST00000564047 TAGLN2P37802 199 aaKnown RBP9.92□□□□□ -0.82
SPG7-209ENST00000564047 B2MP61769 119 aa9.92□□□□□ -0.82
SPG7-209ENST00000564047 SOHLH1Q5JUK2 328 aa9.92□□□□□ -0.82
SPG7-209ENST00000564047 C18orf65Q6ZTR6 163 aa9.92□□□□□ -0.82
SPG7-209ENST00000564047 CBLN2Q8IUK8 224 aa9.92□□□□□ -0.82
SPG7-209ENST00000564047 ZNF414Q96IQ9 312 aa9.92□□□□□ -0.82
SPG7-209ENST00000564047 CMYA5Q8N3K9 4069 aa9.92□□□□□ -0.82
SPG7-209ENST00000564047 IGHV4OR15-8A0A075B7B6 117 aa9.91□□□□□ -0.82
SPG7-209ENST00000564047 A0A087WW49 117 aa9.91□□□□□ -0.82
SPG7-209ENST00000564047 WI2-2373I1.2A0A1W2PRP0 233 aa9.91□□□□□ -0.82
SPG7-209ENST00000564047 ADARB2-AS1A8MUL3 147 aa9.91□□□□□ -0.82
SPG7-209ENST00000564047 NDUFA4O00483 81 aa9.91□□□□□ -0.82
SPG7-209ENST00000564047 FOLR2P14207 255 aa9.91□□□□□ -0.82
SPG7-209ENST00000564047 PLP1P60201 277 aa9.91□□□□□ -0.82
SPG7-209ENST00000564047 FFAR4Q5NUL3 377 aa9.91□□□□□ -0.82
SPG7-209ENST00000564047 HIST2H2BDQ6DRA6 164 aa9.91□□□□□ -0.82
SPG7-209ENST00000564047 TMEM88Q6PEY1 159 aa9.91□□□□□ -0.82
SPG7-209ENST00000564047 C8orf86Q6ZUL3 223 aa9.91□□□□□ -0.82
SPG7-209ENST00000564047 GPHB5Q86YW7 130 aa9.91□□□□□ -0.82
SPG7-209ENST00000564047 OR1N2Q8NGR9 330 aa9.91□□□□□ -0.82
SPG7-209ENST00000564047 RCC1LQ96I51 464 aaKnown RBP9.91□□□□□ -0.82
SPG7-209ENST00000564047 CITED1Q99966 193 aa9.91□□□□□ -0.82
SPG7-209ENST00000564047 PUS1Q9Y606 427 aaKnown RBP eCLIP9.91□□□□□ -0.82
SPG7-209ENST00000564047 CTXND1A0A1B0GTU2 59 aa9.9□□□□□ -0.82
SPG7-209ENST00000564047 A0A1W2PRX2 142 aa9.9□□□□□ -0.82
SPG7-209ENST00000564047 LINC01619G3V211 115 aa9.9□□□□□ -0.82
SPG7-209ENST00000564047 YIF1AO95070 293 aa9.9□□□□□ -0.82
SPG7-209ENST00000564047 BCL2P10415 239 aa9.9□□□□□ -0.82
SPG7-209ENST00000564047 ZNF726P1Q15940 193 aa9.9□□□□□ -0.82
SPG7-209ENST00000564047 RPEL1Q2QD12 228 aa9.9□□□□□ -0.82
SPG7-209ENST00000564047 ACOT6Q3I5F7 207 aaPredicted RBP9.9□□□□□ -0.82
SPG7-209ENST00000564047 FAM106AQ4KMX7 169 aa9.9□□□□□ -0.82
SPG7-209ENST00000564047 TOMM20LQ6UXN7 152 aa9.9□□□□□ -0.82
SPG7-209ENST00000564047 OR11H1Q8NG94 326 aa9.9□□□□□ -0.82
SPG7-209ENST00000564047 DPF1Q92782 380 aa9.9□□□□□ -0.82
SPG7-209ENST00000564047 RNF125Q96EQ8 232 aa9.9□□□□□ -0.82
SPG7-209ENST00000564047 RARRES2Q99969 163 aa9.9□□□□□ -0.82
SPG7-209ENST00000564047 ZNF747Q9BV97 191 aa9.9□□□□□ -0.82
SPG7-209ENST00000564047 ZFAND3Q9H8U3 227 aa9.9□□□□□ -0.82
SPG7-209ENST00000564047 RPS10P5Q9NQ39 176 aa9.9□□□□□ -0.82
SPG7-209ENST00000564047 ELOA3CA0A087WX78 387 aaPredicted RBP9.89□□□□□ -0.83
SPG7-209ENST00000564047 IGHV3-35A0A0C4DH35 117 aa9.89□□□□□ -0.83
SPG7-209ENST00000564047 A0A1B0GV50 99 aa9.89□□□□□ -0.83
SPG7-209ENST00000564047 C7orf77A4D0Y5 90 aa9.89□□□□□ -0.83
SPG7-209ENST00000564047 MAP1LC3B2A6NCE7 125 aa9.89□□□□□ -0.83
SPG7-209ENST00000564047 IL4P05112 153 aa9.89□□□□□ -0.83
SPG7-209ENST00000564047 ELLP55199 621 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms