RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 EWSR1Q01844 656 aaKnown RBP eCLIP13.91□□□□□ -0.18
TRADD-203ENST00000563348 ZNF846Q147U1 533 aa13.91□□□□□ -0.18
TRADD-203ENST00000563348 PPP1R14BQ96C90 147 aa13.91□□□□□ -0.18
TRADD-203ENST00000563348 PTTG2Q9NZH5 202 aa13.91□□□□□ -0.18
TRADD-203ENST00000563348 RCL1Q9Y2P8 373 aaKnown RBP13.91□□□□□ -0.18
TRADD-203ENST00000563348 PLECQ15149 4684 aaKnown RBP13.91□□□□□ -0.18
TRADD-203ENST00000563348 LCE6AA0A183 80 aa13.9□□□□□ -0.18
TRADD-203ENST00000563348 SMCO3A2RU48 225 aa13.9□□□□□ -0.18
TRADD-203ENST00000563348 C7orf66A4D0T2 115 aa13.9□□□□□ -0.18
TRADD-203ENST00000563348 CCNKO75909 580 aa13.9□□□□□ -0.18
TRADD-203ENST00000563348 SPP1P10451 314 aa13.9□□□□□ -0.18
TRADD-203ENST00000563348 DLK1P80370 383 aa13.9□□□□□ -0.18
TRADD-203ENST00000563348 MORN3Q6PF18 240 aaPredicted RBP13.9□□□□□ -0.18
TRADD-203ENST00000563348 OR8I2Q8N0Y5 310 aa13.9□□□□□ -0.18
TRADD-203ENST00000563348 OR10P1Q8NGE3 313 aa13.9□□□□□ -0.18
TRADD-203ENST00000563348 OR11H2Q8NH07 326 aa13.9□□□□□ -0.18
TRADD-203ENST00000563348 WDR12Q9GZL7 423 aaKnown RBP13.9□□□□□ -0.18
TRADD-203ENST00000563348 RYR2Q92736 4967 aa13.9□□□□□ -0.18
TRADD-203ENST00000563348 FAM25EA8MYX2 175 aa13.89□□□□□ -0.19
TRADD-203ENST00000563348 FNDC10F2Z333 226 aa13.89□□□□□ -0.19
TRADD-203ENST00000563348 ORM2P19652 201 aa13.89□□□□□ -0.19
TRADD-203ENST00000563348 TMEM41BQ5BJD5 291 aa13.89□□□□□ -0.19
TRADD-203ENST00000563348 CYP2G1PQ6ZSU1 146 aa13.89□□□□□ -0.19
TRADD-203ENST00000563348 TMEM217Q8N7C4 229 aa13.89□□□□□ -0.19
TRADD-203ENST00000563348 NPVFQ9HCQ7 196 aa13.89□□□□□ -0.19
TRADD-203ENST00000563348 DNAH1Q9P2D7 4330 aa13.88□□□□□ -0.19
TRADD-203ENST00000563348 C5orf51A6NDU8 294 aa13.88□□□□□ -0.19
TRADD-203ENST00000563348 ZNF98A6NK75 572 aa13.88□□□□□ -0.19
TRADD-203ENST00000563348 UPK1BO75841 260 aa13.88□□□□□ -0.19
TRADD-203ENST00000563348 IL5P05113 134 aa13.88□□□□□ -0.19
TRADD-203ENST00000563348 RRAS2P62070 204 aaPredicted RBP13.88□□□□□ -0.19
TRADD-203ENST00000563348 C2orf50Q96LR7 162 aa13.88□□□□□ -0.19
TRADD-203ENST00000563348 S100A7P31151 101 aa13.87□□□□□ -0.19
TRADD-203ENST00000563348 ID1P41134 155 aa13.87□□□□□ -0.19
TRADD-203ENST00000563348 SELENOTP62341 195 aa13.87□□□□□ -0.19
TRADD-203ENST00000563348 ARL16Q0P5N6 197 aa13.87□□□□□ -0.19
TRADD-203ENST00000563348 OR1B1Q8NGR6 318 aa13.87□□□□□ -0.19
TRADD-203ENST00000563348 TMEM147Q9BVK8 224 aa13.87□□□□□ -0.19
TRADD-203ENST00000563348 GGACTQ9BVM4 153 aa13.87□□□□□ -0.19
TRADD-203ENST00000563348 H3BMM0 161 aa13.86□□□□□ -0.19
TRADD-203ENST00000563348 K7EPK0 472 aa13.86□□□□□ -0.19
TRADD-203ENST00000563348 L7N2F9 121 aa13.86□□□□□ -0.19
TRADD-203ENST00000563348 SOCS3O14543 225 aa13.86□□□□□ -0.19
TRADD-203ENST00000563348 DEDDO75618 318 aa13.86□□□□□ -0.19
TRADD-203ENST00000563348 VAMP2P63027 116 aa13.86□□□□□ -0.19
TRADD-203ENST00000563348 IFITM3Q01628 133 aa13.86□□□□□ -0.19
TRADD-203ENST00000563348 MGAT4CQ9UBM8 478 aa13.86□□□□□ -0.19
TRADD-203ENST00000563348 LSM5Q9Y4Y9 91 aaKnown RBP13.86□□□□□ -0.19
TRADD-203ENST00000563348 CXorf65A6NEN9 183 aa13.85□□□□□ -0.19
TRADD-203ENST00000563348 C4BPBP20851 252 aa13.85□□□□□ -0.19
TRADD-203ENST00000563348 GALR1P47211 349 aa13.85□□□□□ -0.19
TRADD-203ENST00000563348 PSMB3P49720 205 aa13.85□□□□□ -0.19
TRADD-203ENST00000563348 PLP1P60201 277 aa13.85□□□□□ -0.19
TRADD-203ENST00000563348 IL15RAQ13261 267 aa13.85□□□□□ -0.19
TRADD-203ENST00000563348 SAMD13Q5VXD3 122 aa13.85□□□□□ -0.19
TRADD-203ENST00000563348 TEPPQ6URK8 271 aa13.85□□□□□ -0.19
TRADD-203ENST00000563348 GSG1LQ6UXU4 331 aa13.85□□□□□ -0.19
TRADD-203ENST00000563348 ENKURQ8TC29 256 aa13.85□□□□□ -0.19
TRADD-203ENST00000563348 LINC00052Q96N35 136 aa13.85□□□□□ -0.19
TRADD-203ENST00000563348 RSG1Q9BU20 258 aa13.85□□□□□ -0.19
TRADD-203ENST00000563348 SLC25A32Q9H2D1 315 aa13.85□□□□□ -0.19
TRADD-203ENST00000563348 C11orf1Q9H5F2 150 aa13.85□□□□□ -0.19
TRADD-203ENST00000563348 SLC25A22Q9H936 323 aa13.85□□□□□ -0.19
TRADD-203ENST00000563348 BATF3Q9NR55 127 aa13.85□□□□□ -0.19
TRADD-203ENST00000563348 ISLRO14498 428 aa13.84□□□□□ -0.19
TRADD-203ENST00000563348 HYPMO75409 117 aa13.84□□□□□ -0.19
TRADD-203ENST00000563348 HLA-DRB4P13762 266 aa13.84□□□□□ -0.19
TRADD-203ENST00000563348 MEOX2P50222 304 aa13.84□□□□□ -0.19
TRADD-203ENST00000563348 NUTF2P61970 127 aaKnown RBP13.84□□□□□ -0.19
TRADD-203ENST00000563348 PMS2P11Q13670 270 aa13.84□□□□□ -0.19
TRADD-203ENST00000563348 CSNK1G2-AS1Q8NCQ2 148 aa13.84□□□□□ -0.19
TRADD-203ENST00000563348 C17orf77Q96MU5 243 aa13.84□□□□□ -0.19
TRADD-203ENST00000563348 GPR82Q96P67 336 aa13.84□□□□□ -0.19
TRADD-203ENST00000563348 C11orf68Q9H3H3 251 aaKnown RBP13.84□□□□□ -0.19
TRADD-203ENST00000563348 HLA-DRB4X5D2U9 266 aa13.84□□□□□ -0.19
TRADD-203ENST00000563348 LINC00869P0C866 280 aa13.83□□□□□ -0.2
TRADD-203ENST00000563348 BCAP31P51572 246 aa13.83□□□□□ -0.2
TRADD-203ENST00000563348 RAP2BP61225 183 aa13.83□□□□□ -0.2
TRADD-203ENST00000563348 SHANK2-AS3Q9BTD1 123 aa13.83□□□□□ -0.2
TRADD-203ENST00000563348 SLC25A39Q9BZJ4 359 aaPredicted RBP13.83□□□□□ -0.2
TRADD-203ENST00000563348 DOK5Q9P104 306 aa13.83□□□□□ -0.2
TRADD-203ENST00000563348 HIGD1AQ9Y241 93 aa13.83□□□□□ -0.2
TRADD-203ENST00000563348 ZNF705EA8MWA4 302 aaPredicted RBP13.82□□□□□ -0.2
TRADD-203ENST00000563348 H3BRN7 92 aa13.82□□□□□ -0.2
TRADD-203ENST00000563348 JTBO76095 146 aa13.82□□□□□ -0.2
TRADD-203ENST00000563348 PVALBP20472 110 aaPredicted RBP13.82□□□□□ -0.2
TRADD-203ENST00000563348 CAV2P51636 162 aa13.82□□□□□ -0.2
TRADD-203ENST00000563348 DEFB1P60022 68 aa13.82□□□□□ -0.2
TRADD-203ENST00000563348 GDF5OSQ5U4N7 250 aa13.82□□□□□ -0.2
TRADD-203ENST00000563348 CEMP1Q6PRD7 247 aaPredicted RBP13.82□□□□□ -0.2
TRADD-203ENST00000563348 FOXI2Q6ZQN5 318 aa13.82□□□□□ -0.2
TRADD-203ENST00000563348 C16orf92Q96LL3 132 aa13.82□□□□□ -0.2
TRADD-203ENST00000563348 SCRT1Q9BWW7 348 aa13.82□□□□□ -0.2
TRADD-203ENST00000563348 C1QTNF4Q9BXJ3 329 aa13.82□□□□□ -0.2
TRADD-203ENST00000563348 SAV1Q9H4B6 383 aaPredicted RBP13.82□□□□□ -0.2
TRADD-203ENST00000563348 GPN1Q9HCN4 374 aaPredicted RBP13.82□□□□□ -0.2
TRADD-203ENST00000563348 CLEC5AQ9NY25 188 aa13.82□□□□□ -0.2
TRADD-203ENST00000563348 NUPR2A6NF83 97 aa13.81□□□□□ -0.2
TRADD-203ENST00000563348 FAM24AA6NFZ4 105 aa13.81□□□□□ -0.2
TRADD-203ENST00000563348 OR5G3P0C626 314 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms