RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 CSN3P07498 182 aa10.75□□□□□ -0.69
CLK3-206ENST00000562078 ZNF146Q15072 292 aa10.75□□□□□ -0.69
CLK3-206ENST00000562078 ZNF497Q6ZNH5 498 aa10.75□□□□□ -0.69
CLK3-206ENST00000562078 ARPC1AQ92747 370 aa10.75□□□□□ -0.69
CLK3-206ENST00000562078 TMUB1Q9BVT8 246 aa10.75□□□□□ -0.69
CLK3-206ENST00000562078 PLEKHA3Q9HB20 300 aa10.75□□□□□ -0.69
CLK3-206ENST00000562078 HSPB8Q9UJY1 196 aa10.75□□□□□ -0.69
CLK3-206ENST00000562078 INSIG2Q9Y5U4 225 aa10.75□□□□□ -0.69
CLK3-206ENST00000562078 J3QR89 54 aa10.75□□□□□ -0.69
CLK3-206ENST00000562078 OR5AL1P0C617 328 aa10.75□□□□□ -0.69
CLK3-206ENST00000562078 ZNF137PP52743 207 aa10.75□□□□□ -0.69
CLK3-206ENST00000562078 EIF4EBP1Q13541 118 aaPredicted RBP10.75□□□□□ -0.69
CLK3-206ENST00000562078 ETDBQ3ZM63 59 aa10.75□□□□□ -0.69
CLK3-206ENST00000562078 TIMM23BQ5SRD1 257 aa10.75□□□□□ -0.69
CLK3-206ENST00000562078 BOD1L2Q8IYS8 172 aa10.75□□□□□ -0.69
CLK3-206ENST00000562078 VGLL1Q99990 258 aa10.75□□□□□ -0.69
CLK3-206ENST00000562078 TMEM167BQ9NRX6 74 aa10.75□□□□□ -0.69
CLK3-206ENST00000562078 MRPL16Q9NX20 251 aaKnown RBP10.75□□□□□ -0.69
CLK3-206ENST00000562078 LINC00473A8K010 186 aa10.74□□□□□ -0.69
CLK3-206ENST00000562078 K7ERJ3 54 aa10.74□□□□□ -0.69
CLK3-206ENST00000562078 MOB1BQ7L9L4 216 aa10.74□□□□□ -0.69
CLK3-206ENST00000562078 ADTRPQ96IZ2 230 aa10.74□□□□□ -0.69
CLK3-206ENST00000562078 HSD17B10Q99714 261 aaKnown RBP10.74□□□□□ -0.69
CLK3-206ENST00000562078 CXXC4Q9H2H0 198 aa10.74□□□□□ -0.69
CLK3-206ENST00000562078 SLC25A15Q9Y619 301 aa10.74□□□□□ -0.69
CLK3-206ENST00000562078 TFF1P04155 84 aa10.74□□□□□ -0.69
CLK3-206ENST00000562078 HBBP68871 147 aa10.74□□□□□ -0.69
CLK3-206ENST00000562078 CATR1Q13166 79 aa10.74□□□□□ -0.69
CLK3-206ENST00000562078 CR1LQ2VPA4 569 aa10.74□□□□□ -0.69
CLK3-206ENST00000562078 TEPPQ6URK8 271 aa10.74□□□□□ -0.69
CLK3-206ENST00000562078 C11orf53Q8IXP5 236 aa10.74□□□□□ -0.69
CLK3-206ENST00000562078 OR4A16Q8NH70 328 aa10.74□□□□□ -0.69
CLK3-206ENST00000562078 PSG8Q9UQ74 426 aa10.74□□□□□ -0.69
CLK3-206ENST00000562078 F11RQ9Y624 299 aaKnown RBP10.74□□□□□ -0.69
CLK3-206ENST00000562078 KBTBD11-OT1A0A1B0GTJ5 212 aa10.73□□□□□ -0.69
CLK3-206ENST00000562078 PSPNO60542 156 aa10.73□□□□□ -0.69
CLK3-206ENST00000562078 KLRB1Q12918 225 aa10.73□□□□□ -0.69
CLK3-206ENST00000562078 ZNF474Q6S9Z5 364 aaPredicted RBP10.73□□□□□ -0.69
CLK3-206ENST00000562078 MTURNQ8N3F0 131 aa10.73□□□□□ -0.69
CLK3-206ENST00000562078 ITPR1Q14643 2758 aa10.73□□□□□ -0.69
CLK3-206ENST00000562078 SMAD7O15105 426 aaKnown RBP10.73□□□□□ -0.69
CLK3-206ENST00000562078 VKORC1L1Q8N0U8 176 aa10.73□□□□□ -0.69
CLK3-206ENST00000562078 PIP4P2Q8N4L2 257 aa10.73□□□□□ -0.69
CLK3-206ENST00000562078 RNF183Q96D59 192 aa10.73□□□□□ -0.69
CLK3-206ENST00000562078 SMIM13P0DJ93 91 aa10.72□□□□□ -0.69
CLK3-206ENST00000562078 FAM231DQ6ZW35 169 aa10.72□□□□□ -0.69
CLK3-206ENST00000562078 ATP5L2Q7Z4Y8 100 aa10.72□□□□□ -0.69
CLK3-206ENST00000562078 ZNF747Q9BV97 191 aa10.72□□□□□ -0.69
CLK3-206ENST00000562078 SLC25A10Q9UBX3 287 aaPredicted RBP10.72□□□□□ -0.69
CLK3-206ENST00000562078 M0R1B8 84 aa10.72□□□□□ -0.69
CLK3-206ENST00000562078 VDAC2P45880 294 aaPredicted RBP10.72□□□□□ -0.69
CLK3-206ENST00000562078 PRR20EP86478 221 aa10.72□□□□□ -0.69
CLK3-206ENST00000562078 PRR20CP86479 221 aa10.72□□□□□ -0.69
CLK3-206ENST00000562078 PRR20DP86480 221 aa10.72□□□□□ -0.69
CLK3-206ENST00000562078 PRR20BP86481 221 aa10.72□□□□□ -0.69
CLK3-206ENST00000562078 PRR20AP86496 221 aa10.72□□□□□ -0.69
CLK3-206ENST00000562078 MSMPQ1L6U9 139 aa10.72□□□□□ -0.69
CLK3-206ENST00000562078 MBNL2Q5VZF2 373 aaKnown RBP10.72□□□□□ -0.69
CLK3-206ENST00000562078 PCP2Q8IVA1 136 aa10.72□□□□□ -0.69
CLK3-206ENST00000562078 PRORYQ9H606 182 aa10.72□□□□□ -0.69
CLK3-206ENST00000562078 MBNL3Q9NUK0 354 aaKnown RBP10.72□□□□□ -0.69
CLK3-206ENST00000562078 DSCAMO60469 2012 aa10.71□□□□□ -0.69
CLK3-206ENST00000562078 TANC2Q9HCD6 1990 aa10.71□□□□□ -0.69
CLK3-206ENST00000562078 DSCAML1Q8TD84 2053 aa10.71□□□□□ -0.69
CLK3-206ENST00000562078 TET2Q6N021 2002 aaPredicted RBP10.71□□□□□ -0.69
CLK3-206ENST00000562078 JPT1Q9UK76 154 aa10.71□□□□□ -0.69
CLK3-206ENST00000562078 SPTA1P02549 2419 aa10.71□□□□□ -0.7
CLK3-206ENST00000562078 RAI1Q7Z5J4 1906 aaPredicted RBP10.71□□□□□ -0.7
CLK3-206ENST00000562078 TMEM8BA6NDV4 472 aa10.7□□□□□ -0.7
CLK3-206ENST00000562078 FNDC10F2Z333 226 aa10.7□□□□□ -0.7
CLK3-206ENST00000562078 MGST3O14880 152 aa10.7□□□□□ -0.7
CLK3-206ENST00000562078 FXYD2P54710 66 aa10.7□□□□□ -0.7
CLK3-206ENST00000562078 GCSAMQ8N6F7 178 aa10.7□□□□□ -0.7
CLK3-206ENST00000562078 SGK494Q96LW2 274 aa10.7□□□□□ -0.7
CLK3-206ENST00000562078 NABP2Q9BQ15 211 aa10.7□□□□□ -0.7
CLK3-206ENST00000562078 C20orf78Q9BR46 151 aa10.7□□□□□ -0.7
CLK3-206ENST00000562078 HCFC1P51610 2035 aa10.7□□□□□ -0.7
CLK3-206ENST00000562078 TRAV3A0A0B4J244 114 aa10.7□□□□□ -0.7
CLK3-206ENST00000562078 TMEM30CPA0ZSE6 113 aa10.7□□□□□ -0.7
CLK3-206ENST00000562078 A8MWL6 223 aa10.7□□□□□ -0.7
CLK3-206ENST00000562078 OR11H12B2RN74 326 aa10.7□□□□□ -0.7
CLK3-206ENST00000562078 GCSHP23434 173 aa10.7□□□□□ -0.7
CLK3-206ENST00000562078 ZBTB34Q8NCN2 500 aa10.7□□□□□ -0.7
CLK3-206ENST00000562078 OR11H1Q8NG94 326 aa10.7□□□□□ -0.7
CLK3-206ENST00000562078 OR4X2Q8NGF9 303 aa10.7□□□□□ -0.7
CLK3-206ENST00000562078 OR9G4Q8NGQ1 327 aa10.7□□□□□ -0.7
CLK3-206ENST00000562078 OR11H2Q8NH07 326 aa10.7□□□□□ -0.7
CLK3-206ENST00000562078 ZNF418Q8TF45 676 aaPredicted RBP10.7□□□□□ -0.7
CLK3-206ENST00000562078 GTSF1Q8WW33 167 aa10.7□□□□□ -0.7
CLK3-206ENST00000562078 PGLYRP4Q96LB8 373 aa10.7□□□□□ -0.7
CLK3-206ENST00000562078 ATRXP46100 2492 aa10.7□□□□□ -0.7
CLK3-206ENST00000562078 F8W1H4 67 aa10.69□□□□□ -0.7
CLK3-206ENST00000562078 H3BMG7 143 aa10.69□□□□□ -0.7
CLK3-206ENST00000562078 K7EMI3 77 aa10.69□□□□□ -0.7
CLK3-206ENST00000562078 TAS2R45P59539 299 aa10.69□□□□□ -0.7
CLK3-206ENST00000562078 LY6DQ14210 128 aa10.69□□□□□ -0.7
CLK3-206ENST00000562078 FAM169BQ8N8A8 192 aa10.69□□□□□ -0.7
CLK3-206ENST00000562078 OR8A1Q8NGG7 326 aa10.69□□□□□ -0.7
CLK3-206ENST00000562078 METRNQ9UJH8 293 aa10.69□□□□□ -0.7
CLK3-206ENST00000562078 A0A1W2PRD5 423 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms