RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 CT45A3Q8NHU0 189 aa11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 DDB2Q92466 427 aa11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 ATP6V0BQ99437 205 aa11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 ENY2Q9NPA8 101 aa11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 MAP1BP46821 2468 aaKnown RBP11.26□□□□□ -0.61
RABGGTA-220ENST00000560998 SH2D7A6NKC9 451 aaPredicted RBP11.26□□□□□ -0.61
RABGGTA-220ENST00000560998 C15orf61A6NNL5 157 aa11.26□□□□□ -0.61
RABGGTA-220ENST00000560998 H3BUT2 72 aa11.26□□□□□ -0.61
RABGGTA-220ENST00000560998 ATP5IP56385 69 aaPredicted RBP11.26□□□□□ -0.61
RABGGTA-220ENST00000560998 LINC00173Q6ZV60 143 aa11.26□□□□□ -0.61
RABGGTA-220ENST00000560998 FA2HQ7L5A8 372 aa11.26□□□□□ -0.61
RABGGTA-220ENST00000560998 FAM216BQ8N7L0 139 aa11.26□□□□□ -0.61
RABGGTA-220ENST00000560998 CLUHP3Q96NS8 147 aa11.26□□□□□ -0.61
RABGGTA-220ENST00000560998 S1PR3Q99500 378 aa11.26□□□□□ -0.61
RABGGTA-220ENST00000560998 PTPRZ1P23471 2315 aaPredicted RBP11.26□□□□□ -0.61
RABGGTA-220ENST00000560998 SPTBN2O15020 2390 aa11.25□□□□□ -0.61
RABGGTA-220ENST00000560998 A0A1W2PPM0 123 aa11.25□□□□□ -0.61
RABGGTA-220ENST00000560998 K7ENP7 123 aa11.25□□□□□ -0.61
RABGGTA-220ENST00000560998 GNG7O60262 68 aa11.25□□□□□ -0.61
RABGGTA-220ENST00000560998 BSPH1Q075Z2 132 aa11.25□□□□□ -0.61
RABGGTA-220ENST00000560998 PRR30Q53SZ7 412 aaPredicted RBP11.25□□□□□ -0.61
RABGGTA-220ENST00000560998 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.25□□□□□ -0.61
RABGGTA-220ENST00000560998 SCNM1Q9BWG6 230 aa11.25□□□□□ -0.61
RABGGTA-220ENST00000560998 C7orf69Q9H7B7 122 aa11.25□□□□□ -0.61
RABGGTA-220ENST00000560998 LINC00574Q9H8X3 128 aa11.25□□□□□ -0.61
RABGGTA-220ENST00000560998 FOXA2Q9Y261 457 aaPredicted RBP11.25□□□□□ -0.61
RABGGTA-220ENST00000560998 FGF6P10767 208 aa11.25□□□□□ -0.61
RABGGTA-220ENST00000560998 CCL8P80075 99 aa11.25□□□□□ -0.61
RABGGTA-220ENST00000560998 KIR3DS1Q14943 382 aa11.25□□□□□ -0.61
RABGGTA-220ENST00000560998 VKORC1L1Q8N0U8 176 aa11.25□□□□□ -0.61
RABGGTA-220ENST00000560998 OR4X2Q8NGF9 303 aa11.25□□□□□ -0.61
RABGGTA-220ENST00000560998 GFRA4Q9GZZ7 299 aa11.25□□□□□ -0.61
RABGGTA-220ENST00000560998 TMEM140Q9NV12 185 aa11.25□□□□□ -0.61
RABGGTA-220ENST00000560998 AMMECR1Q9Y4X0 333 aaPredicted RBP11.25□□□□□ -0.61
RABGGTA-220ENST00000560998 SPCS1Q9Y6A9 102 aa11.25□□□□□ -0.61
RABGGTA-220ENST00000560998 ATMQ13315 3056 aa11.25□□□□□ -0.61
RABGGTA-220ENST00000560998 BSNQ9UPA5 3926 aa11.24□□□□□ -0.61
RABGGTA-220ENST00000560998 C17orf100A8MU93 164 aa11.24□□□□□ -0.61
RABGGTA-220ENST00000560998 PEX7O00628 323 aa11.24□□□□□ -0.61
RABGGTA-220ENST00000560998 SAA2P0DJI9 122 aaPredicted RBP11.24□□□□□ -0.61
RABGGTA-220ENST00000560998 TNFRSF1AP19438 455 aa11.24□□□□□ -0.61
RABGGTA-220ENST00000560998 AZU1P20160 251 aa11.24□□□□□ -0.61
RABGGTA-220ENST00000560998 ADTRPQ96IZ2 230 aa11.24□□□□□ -0.61
RABGGTA-220ENST00000560998 SLC25A33Q9BSK2 321 aa11.24□□□□□ -0.61
RABGGTA-220ENST00000560998 PPIAL4EA0A075B759 164 aa11.23□□□□□ -0.61
RABGGTA-220ENST00000560998 PPIAL4CA0A0B4J2A2 164 aa11.23□□□□□ -0.61
RABGGTA-220ENST00000560998 A8MWL6 223 aa11.23□□□□□ -0.61
RABGGTA-220ENST00000560998 FAM87AP0C7U9 286 aa11.23□□□□□ -0.61
RABGGTA-220ENST00000560998 PPIAL4FP0DN26 164 aa11.23□□□□□ -0.61
RABGGTA-220ENST00000560998 FABP2P12104 132 aa11.23□□□□□ -0.61
RABGGTA-220ENST00000560998 HSPE1P61604 102 aaKnown RBP11.23□□□□□ -0.61
RABGGTA-220ENST00000560998 UBE2L3P68036 154 aaKnown RBP11.23□□□□□ -0.61
RABGGTA-220ENST00000560998 SCGB2A2Q13296 93 aa11.23□□□□□ -0.61
RABGGTA-220ENST00000560998 COL25A1Q9BXS0 654 aaPredicted RBP11.23□□□□□ -0.61
RABGGTA-220ENST00000560998 RPP21Q9H633 154 aaKnown RBP11.23□□□□□ -0.61
RABGGTA-220ENST00000560998 PIEZO2Q9H5I5 2752 aa11.23□□□□□ -0.61
RABGGTA-220ENST00000560998 TET2Q6N021 2002 aaPredicted RBP11.23□□□□□ -0.61
RABGGTA-220ENST00000560998 DMXL2Q8TDJ6 3036 aa11.23□□□□□ -0.61
RABGGTA-220ENST00000560998 TRAV3A0A0B4J244 114 aa11.23□□□□□ -0.61
RABGGTA-220ENST00000560998 J3QR89 54 aa11.23□□□□□ -0.61
RABGGTA-220ENST00000560998 TMEM30BQ3MIR4 351 aa11.23□□□□□ -0.61
RABGGTA-220ENST00000560998 TEX45Q8NA69 505 aa11.23□□□□□ -0.61
RABGGTA-220ENST00000560998 ZNF257Q9Y2Q1 563 aa11.23□□□□□ -0.61
RABGGTA-220ENST00000560998 ZNF329Q86UD4 541 aa11.22□□□□□ -0.61
RABGGTA-220ENST00000560998 BOD1L2Q8IYS8 172 aa11.22□□□□□ -0.61
RABGGTA-220ENST00000560998 ZCCHC24Q8N2G6 241 aaKnown RBP11.22□□□□□ -0.61
RABGGTA-220ENST00000560998 TMEM14BQ9NUH8 114 aa11.22□□□□□ -0.61
RABGGTA-220ENST00000560998 ZNF492Q9P255 531 aa11.22□□□□□ -0.61
RABGGTA-220ENST00000560998 RABAC1Q9UI14 185 aa11.22□□□□□ -0.61
RABGGTA-220ENST00000560998 UQCRFS1P47985 274 aa11.21□□□□□ -0.61
RABGGTA-220ENST00000560998 FOXA3P55318 350 aaPredicted RBP11.21□□□□□ -0.61
RABGGTA-220ENST00000560998 TCTEX1D4Q5JR98 221 aa11.21□□□□□ -0.61
RABGGTA-220ENST00000560998 RPUSD1Q9UJJ7 312 aaKnown RBP11.21□□□□□ -0.61
RABGGTA-220ENST00000560998 PCNX1Q96RV3 2341 aa11.21□□□□□ -0.61
RABGGTA-220ENST00000560998 hADV38S2A0JD32 116 aa11.21□□□□□ -0.62
RABGGTA-220ENST00000560998 A1L4Q6 167 aa11.21□□□□□ -0.62
RABGGTA-220ENST00000560998 VWC2LB2RUY7 222 aa11.21□□□□□ -0.62
RABGGTA-220ENST00000560998 CD300EQ496F6 205 aaPredicted RBP11.21□□□□□ -0.62
RABGGTA-220ENST00000560998 OR4A5Q8NH83 315 aa11.21□□□□□ -0.62
RABGGTA-220ENST00000560998 FAM167A-AS1Q96KT0 104 aa11.21□□□□□ -0.62
RABGGTA-220ENST00000560998 ZNF714Q96N38 554 aa11.21□□□□□ -0.62
RABGGTA-220ENST00000560998 SLC25A2Q9BXI2 301 aa11.21□□□□□ -0.62
RABGGTA-220ENST00000560998 LINC00312Q9Y6C7 94 aa11.21□□□□□ -0.62
RABGGTA-220ENST00000560998 CEP295Q9C0D2 2601 aa11.2□□□□□ -0.62
RABGGTA-220ENST00000560998 SMAD7O15105 426 aaKnown RBP11.2□□□□□ -0.62
RABGGTA-220ENST00000560998 CSN1S1P47710 185 aa11.2□□□□□ -0.62
RABGGTA-220ENST00000560998 FOXI2Q6ZQN5 318 aa11.2□□□□□ -0.62
RABGGTA-220ENST00000560998 RBPMS2Q6ZRY4 209 aaKnown RBP11.2□□□□□ -0.62
RABGGTA-220ENST00000560998 SLC25A48Q6ZT89 311 aaKnown RBP11.2□□□□□ -0.62
RABGGTA-220ENST00000560998 ZNF747Q9BV97 191 aa11.2□□□□□ -0.62
RABGGTA-220ENST00000560998 PRSS22Q9GZN4 317 aa11.2□□□□□ -0.62
RABGGTA-220ENST00000560998 TMEM178BH3BS89 294 aa11.19□□□□□ -0.62
RABGGTA-220ENST00000560998 CHEK1O14757 476 aa11.19□□□□□ -0.62
RABGGTA-220ENST00000560998 OR10W1Q8NGF6 305 aa11.19□□□□□ -0.62
RABGGTA-220ENST00000560998 RND1Q92730 232 aa11.19□□□□□ -0.62
RABGGTA-220ENST00000560998 ZC2HC1AQ96GY0 325 aa11.19□□□□□ -0.62
RABGGTA-220ENST00000560998 SPATA25Q9BR10 227 aa11.19□□□□□ -0.62
RABGGTA-220ENST00000560998 TEX50A0A1B0GTY4 177 aa11.19□□□□□ -0.62
RABGGTA-220ENST00000560998 FCN3O75636 299 aa11.19□□□□□ -0.62
RABGGTA-220ENST00000560998 MEF2CQ06413 473 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms