RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 SULT1A2P50226 295 aa9.07□□□□□ -0.96
LDLR-212ENST00000560467 TAS2R45P59539 299 aa9.07□□□□□ -0.96
LDLR-212ENST00000560467 C10orf113Q5VZT2 155 aa9.07□□□□□ -0.96
LDLR-212ENST00000560467 ZNF343Q6P1L6 599 aa9.07□□□□□ -0.96
LDLR-212ENST00000560467 OR1B1Q8NGR6 318 aa9.07□□□□□ -0.96
LDLR-212ENST00000560467 FAM213BQ8TBF2 198 aa9.07□□□□□ -0.96
LDLR-212ENST00000560467 GATAD1Q8WUU5 269 aa9.07□□□□□ -0.96
LDLR-212ENST00000560467 PBDC1Q9BVG4 233 aa9.07□□□□□ -0.96
LDLR-212ENST00000560467 GPR61Q9BZJ8 451 aa9.07□□□□□ -0.96
LDLR-212ENST00000560467 DYNC2H1Q8NCM8 4307 aaKnown RBP9.06□□□□□ -0.96
LDLR-212ENST00000560467 ANKRD34BA5PLL1 514 aa9.06□□□□□ -0.96
LDLR-212ENST00000560467 RGS13O14921 159 aa9.06□□□□□ -0.96
LDLR-212ENST00000560467 CTSGP08311 255 aa9.06□□□□□ -0.96
LDLR-212ENST00000560467 H2AFB1P0C5Y9 115 aa9.06□□□□□ -0.96
LDLR-212ENST00000560467 PSG1P11464 419 aa9.06□□□□□ -0.96
LDLR-212ENST00000560467 ZP3P21754 424 aa9.06□□□□□ -0.96
LDLR-212ENST00000560467 S100A1P23297 94 aa9.06□□□□□ -0.96
LDLR-212ENST00000560467 LYZP61626 148 aa9.06□□□□□ -0.96
LDLR-212ENST00000560467 PRR20EP86478 221 aa9.06□□□□□ -0.96
LDLR-212ENST00000560467 PRR20CP86479 221 aa9.06□□□□□ -0.96
LDLR-212ENST00000560467 PRR20DP86480 221 aa9.06□□□□□ -0.96
LDLR-212ENST00000560467 PRR20BP86481 221 aa9.06□□□□□ -0.96
LDLR-212ENST00000560467 PRR20AP86496 221 aa9.06□□□□□ -0.96
LDLR-212ENST00000560467 ZNF90Q03938 601 aa9.06□□□□□ -0.96
LDLR-212ENST00000560467 C8orf86Q6ZUL3 223 aa9.06□□□□□ -0.96
LDLR-212ENST00000560467 ZNF491Q8N8L2 437 aa9.06□□□□□ -0.96
LDLR-212ENST00000560467 RNF152Q8N8N0 203 aa9.06□□□□□ -0.96
LDLR-212ENST00000560467 STXBP6Q8NFX7 210 aa9.06□□□□□ -0.96
LDLR-212ENST00000560467 U3KQK5 164 aa9.06□□□□□ -0.96
LDLR-212ENST00000560467 IGKV1OR2-108A0A075B7D4 117 aa9.05□□□□□ -0.96
LDLR-212ENST00000560467 ZNF320A2RRD8 509 aa9.05□□□□□ -0.96
LDLR-212ENST00000560467 ATP6V1G1O75348 118 aa9.05□□□□□ -0.96
LDLR-212ENST00000560467 IGKV1-17P01599 117 aa9.05□□□□□ -0.96
LDLR-212ENST00000560467 HSPB1P04792 205 aaKnown RBP9.05□□□□□ -0.96
LDLR-212ENST00000560467 IL4P05112 153 aa9.05□□□□□ -0.96
LDLR-212ENST00000560467 LGALS1P09382 135 aaKnown RBP9.05□□□□□ -0.96
LDLR-212ENST00000560467 BMI1P35226 326 aa9.05□□□□□ -0.96
LDLR-212ENST00000560467 DEFA5Q01523 94 aa9.05□□□□□ -0.96
LDLR-212ENST00000560467 RPEL1Q2QD12 228 aa9.05□□□□□ -0.96
LDLR-212ENST00000560467 FAM74A1Q5RGS3 127 aa9.05□□□□□ -0.96
LDLR-212ENST00000560467 SFT2D1Q8WV19 159 aa9.05□□□□□ -0.96
LDLR-212ENST00000560467 RNF125Q96EQ8 232 aa9.05□□□□□ -0.96
LDLR-212ENST00000560467 OR5B12Q96R08 314 aa9.05□□□□□ -0.96
LDLR-212ENST00000560467 MRPL32Q9BYC8 188 aaKnown RBP9.05□□□□□ -0.96
LDLR-212ENST00000560467 RPRMQ9NS64 109 aa9.05□□□□□ -0.96
LDLR-212ENST00000560467 TECRQ9NZ01 308 aaKnown RBP9.05□□□□□ -0.96
LDLR-212ENST00000560467 MRPL36Q9P0J6 103 aaKnown RBP9.05□□□□□ -0.96
LDLR-212ENST00000560467 RABAC1Q9UI14 185 aa9.05□□□□□ -0.96
LDLR-212ENST00000560467 HIGD1AQ9Y241 93 aa9.05□□□□□ -0.96
LDLR-212ENST00000560467 RYR2Q92736 4967 aa9.05□□□□□ -0.96
LDLR-212ENST00000560467 IGKV1D-37A0A075B6S9 117 aa9.04□□□□□ -0.96
LDLR-212ENST00000560467 CTXND1A0A1B0GTU2 59 aa9.04□□□□□ -0.96
LDLR-212ENST00000560467 NDUFA4O00483 81 aa9.04□□□□□ -0.96
LDLR-212ENST00000560467 OR2C1O95371 312 aa9.04□□□□□ -0.96
LDLR-212ENST00000560467 GATA2P23769 480 aaPredicted RBP9.04□□□□□ -0.96
LDLR-212ENST00000560467 CDC34P49427 236 aaPredicted RBP9.04□□□□□ -0.96
LDLR-212ENST00000560467 IFITM2Q01629 132 aa9.04□□□□□ -0.96
LDLR-212ENST00000560467 FAM78BQ5VT40 261 aa9.04□□□□□ -0.96
LDLR-212ENST00000560467 FAM122CQ6P4D5 195 aa9.04□□□□□ -0.96
LDLR-212ENST00000560467 C4orf3Q8WVX3 66 aa9.04□□□□□ -0.96
LDLR-212ENST00000560467 GRAMD2BQ96HH9 432 aa9.04□□□□□ -0.96
LDLR-212ENST00000560467 CCDC140Q96MF4 163 aa9.04□□□□□ -0.96
LDLR-212ENST00000560467 DUX3Q96PT4 197 aa9.04□□□□□ -0.96
LDLR-212ENST00000560467 METTL26Q96S19 204 aa9.04□□□□□ -0.96
LDLR-212ENST00000560467 MCRIP2Q9BUT9 160 aaKnown RBP9.04□□□□□ -0.96
LDLR-212ENST00000560467 C20orf24Q9BUV8 137 aa9.04□□□□□ -0.96
LDLR-212ENST00000560467 DOK5Q9P104 306 aa9.04□□□□□ -0.96
LDLR-212ENST00000560467 PUS1Q9Y606 427 aaKnown RBP eCLIP9.04□□□□□ -0.96
LDLR-212ENST00000560467 TENM2Q9NT68 2774 aa9.03□□□□□ -0.96
LDLR-212ENST00000560467 PPP5D1E7EU14 171 aa9.03□□□□□ -0.96
LDLR-212ENST00000560467 IFNA1P01562 189 aa9.03□□□□□ -0.96
LDLR-212ENST00000560467 NPPCP23582 126 aa9.03□□□□□ -0.96
LDLR-212ENST00000560467 PPT1P50897 306 aa9.03□□□□□ -0.96
LDLR-212ENST00000560467 PLP1P60201 277 aa9.03□□□□□ -0.96
LDLR-212ENST00000560467 CLLU1Q5K131 121 aa9.03□□□□□ -0.96
LDLR-212ENST00000560467 LCNL1Q6ZST4 164 aa9.03□□□□□ -0.96
LDLR-212ENST00000560467 IQCF2Q8IXL9 164 aa9.03□□□□□ -0.96
LDLR-212ENST00000560467 KLHL30-AS1Q8NEE0 82 aa9.03□□□□□ -0.96
LDLR-212ENST00000560467 PRR25Q96S07 402 aa9.03□□□□□ -0.96
LDLR-212ENST00000560467 ASCL2Q99929 193 aa9.03□□□□□ -0.96
LDLR-212ENST00000560467 CHRDL1Q9BU40 450 aa9.03□□□□□ -0.96
LDLR-212ENST00000560467 FUT9Q9Y231 359 aa9.03□□□□□ -0.96
LDLR-212ENST00000560467 UFC1Q9Y3C8 167 aa9.03□□□□□ -0.96
LDLR-212ENST00000560467 A0A1W2PS18 150 aa9.02□□□□□ -0.97
LDLR-212ENST00000560467 MAP1LC3B2A6NCE7 125 aa9.02□□□□□ -0.97
LDLR-212ENST00000560467 CXorf1O96002 111 aa9.02□□□□□ -0.97
LDLR-212ENST00000560467 NHLRC4P0CG21 123 aaPredicted RBP9.02□□□□□ -0.97
LDLR-212ENST00000560467 C8orf88P0DMB2 117 aa9.02□□□□□ -0.97
LDLR-212ENST00000560467 MYCNOSP40205 109 aa9.02□□□□□ -0.97
LDLR-212ENST00000560467 KHDC3LQ587J8 217 aa9.02□□□□□ -0.97
LDLR-212ENST00000560467 TOMM20LQ6UXN7 152 aa9.02□□□□□ -0.97
LDLR-212ENST00000560467 LINC00305Q7Z4B0 112 aa9.02□□□□□ -0.97
LDLR-212ENST00000560467 GPHB5Q86YW7 130 aa9.02□□□□□ -0.97
LDLR-212ENST00000560467 OR1N2Q8NGR9 330 aa9.02□□□□□ -0.97
LDLR-212ENST00000560467 MYOZ3Q8TDC0 251 aa9.02□□□□□ -0.97
LDLR-212ENST00000560467 RAB24Q969Q5 203 aa9.02□□□□□ -0.97
LDLR-212ENST00000560467 MAP1LC3BQ9GZQ8 125 aa9.02□□□□□ -0.97
LDLR-212ENST00000560467 HRH4Q9H3N8 390 aa9.02□□□□□ -0.97
LDLR-212ENST00000560467 TMEM231Q9H6L2 316 aa9.02□□□□□ -0.97
LDLR-212ENST00000560467 IGHV3-35A0A0C4DH35 117 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms