RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 LINC00299Q6ZSB3 139 aa7.38□□□□□ -1.23
USP3-207ENST00000558218 CLUHP3Q96NS8 147 aa7.38□□□□□ -1.23
USP3-207ENST00000558218 C1QTNF4Q9BXJ3 329 aa7.38□□□□□ -1.23
USP3-207ENST00000558218 HRH4Q9H3N8 390 aa7.38□□□□□ -1.23
USP3-207ENST00000558218 AGRNO00468 2067 aa7.37□□□□□ -1.23
USP3-207ENST00000558218 CSMD3Q7Z407 3707 aa7.37□□□□□ -1.23
USP3-207ENST00000558218 PRSS46E5RG02 174 aa7.37□□□□□ -1.23
USP3-207ENST00000558218 GIG44P09565 113 aaPredicted RBP7.37□□□□□ -1.23
USP3-207ENST00000558218 OR4E1P0C645 316 aa7.37□□□□□ -1.23
USP3-207ENST00000558218 MIFP14174 115 aa7.37□□□□□ -1.23
USP3-207ENST00000558218 NKX2-1P43699 371 aaPredicted RBP7.37□□□□□ -1.23
USP3-207ENST00000558218 EWSR1Q01844 656 aaKnown RBP eCLIP7.37□□□□□ -1.23
USP3-207ENST00000558218 ZNF90Q03938 601 aa7.37□□□□□ -1.23
USP3-207ENST00000558218 ACTL10Q5JWF8 245 aa7.37□□□□□ -1.23
USP3-207ENST00000558218 SPATA31B1PQ5VZV4 182 aa7.37□□□□□ -1.23
USP3-207ENST00000558218 OR4D5Q8NGN0 318 aa7.37□□□□□ -1.23
USP3-207ENST00000558218 C11orf45Q8TAV5 145 aa7.37□□□□□ -1.23
USP3-207ENST00000558218 SMIM8Q96KF7 97 aa7.37□□□□□ -1.23
USP3-207ENST00000558218 SDHCQ99643 169 aaPredicted RBP7.37□□□□□ -1.23
USP3-207ENST00000558218 STRAPQ9Y3F4 350 aaKnown RBP7.37□□□□□ -1.23
USP3-207ENST00000558218 ZNF705EA8MWA4 302 aaPredicted RBP7.36□□□□□ -1.23
USP3-207ENST00000558218 WRBO00258 174 aa7.36□□□□□ -1.23
USP3-207ENST00000558218 IAPPP10997 89 aa7.36□□□□□ -1.23
USP3-207ENST00000558218 MEOX2P50222 304 aa7.36□□□□□ -1.23
USP3-207ENST00000558218 TAS2R30P59541 319 aa7.36□□□□□ -1.23
USP3-207ENST00000558218 KIR3DS1Q14943 382 aa7.36□□□□□ -1.23
USP3-207ENST00000558218 PSMG4Q5JS54 123 aa7.36□□□□□ -1.23
USP3-207ENST00000558218 SPANXN5Q5MJ07 72 aa7.36□□□□□ -1.23
USP3-207ENST00000558218 TMEM144Q7Z5S9 345 aa7.36□□□□□ -1.23
USP3-207ENST00000558218 CSNK1G2-AS1Q8NCQ2 148 aa7.36□□□□□ -1.23
USP3-207ENST00000558218 PHLDA1Q8WV24 401 aaPredicted RBP7.36□□□□□ -1.23
USP3-207ENST00000558218 GPR82Q96P67 336 aa7.36□□□□□ -1.23
USP3-207ENST00000558218 PBDC1Q9BVG4 233 aa7.36□□□□□ -1.23
USP3-207ENST00000558218 IGKV1OR2-108A0A075B7D4 117 aa7.35□□□□□ -1.23
USP3-207ENST00000558218 KNCNA6PVL3 124 aa7.35□□□□□ -1.23
USP3-207ENST00000558218 C11orf94C9JXX5 98 aa7.35□□□□□ -1.23
USP3-207ENST00000558218 FNDC10F2Z333 226 aa7.35□□□□□ -1.23
USP3-207ENST00000558218 H3BMM0 161 aa7.35□□□□□ -1.23
USP3-207ENST00000558218 ISLRO14498 428 aa7.35□□□□□ -1.23
USP3-207ENST00000558218 IL7P13232 177 aa7.35□□□□□ -1.23
USP3-207ENST00000558218 HLA-DRB4P13762 266 aa7.35□□□□□ -1.23
USP3-207ENST00000558218 PSMB3P49720 205 aa7.35□□□□□ -1.23
USP3-207ENST00000558218 PMS2P11Q13670 270 aa7.35□□□□□ -1.23
USP3-207ENST00000558218 C4orf46Q504U0 113 aa7.35□□□□□ -1.23
USP3-207ENST00000558218 S100A7AQ86SG5 101 aa7.35□□□□□ -1.23
USP3-207ENST00000558218 OR8I2Q8N0Y5 310 aa7.35□□□□□ -1.23
USP3-207ENST00000558218 BPIFCQ8NFQ6 507 aa7.35□□□□□ -1.23
USP3-207ENST00000558218 MITD1Q8WV92 249 aa7.35□□□□□ -1.23
USP3-207ENST00000558218 LINC00476Q8WZB0 136 aa7.35□□□□□ -1.23
USP3-207ENST00000558218 KRTAP17-1Q9BYP8 105 aa7.35□□□□□ -1.23
USP3-207ENST00000558218 MAGT1Q9H0U3 335 aa7.35□□□□□ -1.23
USP3-207ENST00000558218 PSENENQ9NZ42 101 aa7.35□□□□□ -1.23
USP3-207ENST00000558218 PAIP2BQ9ULR5 123 aaKnown RBP7.35□□□□□ -1.23
USP3-207ENST00000558218 RNF24Q9Y225 148 aa7.35□□□□□ -1.23
USP3-207ENST00000558218 HLA-DRB4X5D2U9 266 aa7.35□□□□□ -1.23
USP3-207ENST00000558218 DYNC2H1Q8NCM8 4307 aaKnown RBP7.34□□□□□ -1.23
USP3-207ENST00000558218 SMIM9A6NGZ8 99 aa7.34□□□□□ -1.23
USP3-207ENST00000558218 ADAP1O75689 374 aa7.34□□□□□ -1.23
USP3-207ENST00000558218 BTCP35070 178 aa7.34□□□□□ -1.23
USP3-207ENST00000558218 GALR1P47211 349 aa7.34□□□□□ -1.23
USP3-207ENST00000558218 LYZP61626 148 aa7.34□□□□□ -1.23
USP3-207ENST00000558218 SELENOTP62341 195 aa7.34□□□□□ -1.23
USP3-207ENST00000558218 FOXI2Q6ZQN5 318 aa7.34□□□□□ -1.23
USP3-207ENST00000558218 Q8NAQ8 132 aa7.34□□□□□ -1.23
USP3-207ENST00000558218 OR1B1Q8NGR6 318 aa7.34□□□□□ -1.23
USP3-207ENST00000558218 PPP1R14BQ96C90 147 aa7.34□□□□□ -1.23
USP3-207ENST00000558218 NPVFQ9HCQ7 196 aa7.34□□□□□ -1.23
USP3-207ENST00000558218 TBC1D24Q9ULP9 559 aa7.34□□□□□ -1.23
USP3-207ENST00000558218 FLVCR2Q9UPI3 526 aa7.34□□□□□ -1.23
USP3-207ENST00000558218 ZNF98A6NK75 572 aa7.33□□□□□ -1.24
USP3-207ENST00000558218 PMS2P5A8MQ11 134 aa7.33□□□□□ -1.24
USP3-207ENST00000558218 K7EPK0 472 aa7.33□□□□□ -1.24
USP3-207ENST00000558218 SOCS3O14543 225 aa7.33□□□□□ -1.24
USP3-207ENST00000558218 PLA2G10O15496 165 aa7.33□□□□□ -1.24
USP3-207ENST00000558218 TSC22D2O75157 780 aa7.33□□□□□ -1.24
USP3-207ENST00000558218 ANXA7P20073 488 aaKnown RBP7.33□□□□□ -1.24
USP3-207ENST00000558218 PAX9P55771 341 aa7.33□□□□□ -1.24
USP3-207ENST00000558218 PLP1P60201 277 aa7.33□□□□□ -1.24
USP3-207ENST00000558218 POLR2GP62487 172 aaKnown RBP eCLIP7.33□□□□□ -1.24
USP3-207ENST00000558218 DLK1P80370 383 aa7.33□□□□□ -1.24
USP3-207ENST00000558218 AKR1C1Q04828 323 aa7.33□□□□□ -1.24
USP3-207ENST00000558218 OR2F1Q13607 317 aa7.33□□□□□ -1.24
USP3-207ENST00000558218 LGALS9CQ6DKI2 356 aa7.33□□□□□ -1.24
USP3-207ENST00000558218 TMEM14EPQ6UXP3 125 aa7.33□□□□□ -1.24
USP3-207ENST00000558218 OR10P1Q8NGE3 313 aa7.33□□□□□ -1.24
USP3-207ENST00000558218 NEU1Q99519 415 aa7.33□□□□□ -1.24
USP3-207ENST00000558218 CCDC32Q9BV29 185 aa7.33□□□□□ -1.24
USP3-207ENST00000558218 GGACTQ9BVM4 153 aa7.33□□□□□ -1.24
USP3-207ENST00000558218 SAV1Q9H4B6 383 aaPredicted RBP7.33□□□□□ -1.24
USP3-207ENST00000558218 X6R8D5 127 aa7.33□□□□□ -1.24
USP3-207ENST00000558218 LINC00854A0A1B0GVQ3 168 aa7.32□□□□□ -1.24
USP3-207ENST00000558218 LYRM1O43325 122 aa7.32□□□□□ -1.24
USP3-207ENST00000558218 LY6G6CO95867 125 aa7.32□□□□□ -1.24
USP3-207ENST00000558218 TCRBP04435 133 aa7.32□□□□□ -1.24
USP3-207ENST00000558218 IL5P05113 134 aa7.32□□□□□ -1.24
USP3-207ENST00000558218 RBMY1A1P0DJD3 496 aaKnown RBP7.32□□□□□ -1.24
USP3-207ENST00000558218 RBMY1CP0DJD4 496 aa7.32□□□□□ -1.24
USP3-207ENST00000558218 C4BPBP20851 252 aa7.32□□□□□ -1.24
USP3-207ENST00000558218 NANOS2P60321 138 aaKnown RBP7.32□□□□□ -1.24
USP3-207ENST00000558218 RBMY1FQ15415 496 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms