RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 SMPXQ9UHP9 88 aa13.2□□□□□ -0.3
TUBB3-211ENST00000556536 IGHV3-66A0A0C4DH42 116 aa13.19□□□□□ -0.3
TUBB3-211ENST00000556536 KANTRA0A1W2PQU2 76 aa13.19□□□□□ -0.3
TUBB3-211ENST00000556536 BOLA2-SMG1P6H3BVE0 249 aa13.19□□□□□ -0.3
TUBB3-211ENST00000556536 SAP30O75446 220 aa13.19□□□□□ -0.3
TUBB3-211ENST00000556536 HNRNPCP07910 306 aaKnown RBP eCLIP13.19□□□□□ -0.3
TUBB3-211ENST00000556536 NPPCP23582 126 aa13.19□□□□□ -0.3
TUBB3-211ENST00000556536 CRYBB3P26998 211 aa13.19□□□□□ -0.3
TUBB3-211ENST00000556536 ATP6V0CP27449 155 aa13.19□□□□□ -0.3
TUBB3-211ENST00000556536 PLP1P60201 277 aa13.19□□□□□ -0.3
TUBB3-211ENST00000556536 RABAC1Q9UI14 185 aa13.19□□□□□ -0.3
TUBB3-211ENST00000556536 U3KQE9 123 aa13.19□□□□□ -0.3
TUBB3-211ENST00000556536 C17orf112F2Z3M2 114 aa13.18□□□□□ -0.3
TUBB3-211ENST00000556536 HYPMO75409 117 aa13.18□□□□□ -0.3
TUBB3-211ENST00000556536 JTBO76095 146 aa13.18□□□□□ -0.3
TUBB3-211ENST00000556536 GCSAMLQ5JQS6 135 aa13.18□□□□□ -0.3
TUBB3-211ENST00000556536 ST8SIA2Q92186 375 aa13.18□□□□□ -0.3
TUBB3-211ENST00000556536 MARC2Q969Z3 335 aa13.18□□□□□ -0.3
TUBB3-211ENST00000556536 ZNF471Q9BX82 626 aaPredicted RBP13.18□□□□□ -0.3
TUBB3-211ENST00000556536 SH3BGRL3Q9H299 93 aa13.18□□□□□ -0.3
TUBB3-211ENST00000556536 ARV1Q9H2C2 271 aa13.18□□□□□ -0.3
TUBB3-211ENST00000556536 SIGLEC8Q9NYZ4 499 aa13.18□□□□□ -0.3
TUBB3-211ENST00000556536 MLXQ9UH92 298 aa13.18□□□□□ -0.3
TUBB3-211ENST00000556536 PRKDCP78527 4128 aaKnown RBP13.18□□□□□ -0.3
TUBB3-211ENST00000556536 CHEK1O14757 476 aa13.17□□□□□ -0.3
TUBB3-211ENST00000556536 OR5G3P0C626 314 aa13.17□□□□□ -0.3
TUBB3-211ENST00000556536 Q6ZRG5 221 aa13.17□□□□□ -0.3
TUBB3-211ENST00000556536 TMEM37Q8WXS4 190 aa13.17□□□□□ -0.3
TUBB3-211ENST00000556536 MCRIP2Q9BUT9 160 aaKnown RBP13.17□□□□□ -0.3
TUBB3-211ENST00000556536 RHPN1-AS1Q9BWJ2 59 aa13.17□□□□□ -0.3
TUBB3-211ENST00000556536 KCNIP2Q9NS61 270 aa13.17□□□□□ -0.3
TUBB3-211ENST00000556536 TIMM9Q9Y5J7 89 aa13.17□□□□□ -0.3
TUBB3-211ENST00000556536 NOTCH1P46531 2555 aa13.17□□□□□ -0.3
TUBB3-211ENST00000556536 COX7A2P2O60397 106 aa13.16□□□□□ -0.3
TUBB3-211ENST00000556536 FFAR4Q5NUL3 377 aa13.16□□□□□ -0.3
TUBB3-211ENST00000556536 C9orf66Q5T8R8 295 aa13.16□□□□□ -0.3
TUBB3-211ENST00000556536 PXDC1Q5TGL8 231 aa13.16□□□□□ -0.3
TUBB3-211ENST00000556536 UHRF2Q96PU4 802 aa13.16□□□□□ -0.3
TUBB3-211ENST00000556536 VSIRQ9H7M9 311 aa13.16□□□□□ -0.3
TUBB3-211ENST00000556536 HIGD1AQ9Y241 93 aa13.16□□□□□ -0.3
TUBB3-211ENST00000556536 BOLA1Q9Y3E2 137 aa13.16□□□□□ -0.3
TUBB3-211ENST00000556536 DEFB114Q30KQ6 69 aa13.15□□□□□ -0.3
TUBB3-211ENST00000556536 OXLD1Q5BKU9 147 aa13.15□□□□□ -0.3
TUBB3-211ENST00000556536 DYNLRB2Q8TF09 96 aa13.15□□□□□ -0.3
TUBB3-211ENST00000556536 PPP1R14BQ96C90 147 aa13.15□□□□□ -0.3
TUBB3-211ENST00000556536 GNPNAT1Q96EK6 184 aaPredicted RBP13.15□□□□□ -0.3
TUBB3-211ENST00000556536 RNF2Q99496 336 aa13.15□□□□□ -0.3
TUBB3-211ENST00000556536 PSMG3Q9BT73 122 aaPredicted RBP13.15□□□□□ -0.3
TUBB3-211ENST00000556536 SCRT1Q9BWW7 348 aa13.15□□□□□ -0.3
TUBB3-211ENST00000556536 SLC25A39Q9BZJ4 359 aaPredicted RBP13.15□□□□□ -0.3
TUBB3-211ENST00000556536 DNAJC4Q9NNZ3 241 aa13.15□□□□□ -0.3
TUBB3-211ENST00000556536 ELOA3CA0A087WX78 387 aaPredicted RBP13.14□□□□□ -0.31
TUBB3-211ENST00000556536 H3BRN7 92 aa13.14□□□□□ -0.31
TUBB3-211ENST00000556536 BUB3O43684 328 aa13.14□□□□□ -0.31
TUBB3-211ENST00000556536 IGLV1-51P01701 117 aa13.14□□□□□ -0.31
TUBB3-211ENST00000556536 MORN5Q5VZ52 161 aa13.14□□□□□ -0.31
TUBB3-211ENST00000556536 C10orf113Q5VZT2 155 aa13.14□□□□□ -0.31
TUBB3-211ENST00000556536 LEMD1Q68G75 181 aa13.14□□□□□ -0.31
TUBB3-211ENST00000556536 C16orf54Q6UWD8 224 aa13.14□□□□□ -0.31
TUBB3-211ENST00000556536 OR1L4Q8NGR5 311 aa13.14□□□□□ -0.31
TUBB3-211ENST00000556536 OR2G3Q8NGZ4 309 aa13.14□□□□□ -0.31
TUBB3-211ENST00000556536 NARS2Q96I59 477 aaKnown RBP13.14□□□□□ -0.31
TUBB3-211ENST00000556536 SHANK2-AS3Q9BTD1 123 aa13.14□□□□□ -0.31
TUBB3-211ENST00000556536 SLC25A32Q9H2D1 315 aa13.14□□□□□ -0.31
TUBB3-211ENST00000556536 A0A1W2PS18 150 aa13.13□□□□□ -0.31
TUBB3-211ENST00000556536 IZUMO1RA6ND01 250 aa13.13□□□□□ -0.31
TUBB3-211ENST00000556536 ZNF98A6NK75 572 aa13.13□□□□□ -0.31
TUBB3-211ENST00000556536 INSL3P51460 131 aa13.13□□□□□ -0.31
TUBB3-211ENST00000556536 CD300EQ496F6 205 aaPredicted RBP13.13□□□□□ -0.31
TUBB3-211ENST00000556536 LINC00305Q7Z4B0 112 aa13.13□□□□□ -0.31
TUBB3-211ENST00000556536 STOML3Q8TAV4 291 aa13.13□□□□□ -0.31
TUBB3-211ENST00000556536 PFDN5Q99471 154 aa13.13□□□□□ -0.31
TUBB3-211ENST00000556536 TECRQ9NZ01 308 aaKnown RBP13.13□□□□□ -0.31
TUBB3-211ENST00000556536 G3V4G9 280 aa13.12□□□□□ -0.31
TUBB3-211ENST00000556536 SPP1P10451 314 aa13.12□□□□□ -0.31
TUBB3-211ENST00000556536 RAB2AP61019 212 aa13.12□□□□□ -0.31
TUBB3-211ENST00000556536 SPATA31B1PQ5VZV4 182 aa13.12□□□□□ -0.31
TUBB3-211ENST00000556536 BAP18Q8IXM2 172 aa13.12□□□□□ -0.31
TUBB3-211ENST00000556536 GATAD1Q8WUU5 269 aa13.12□□□□□ -0.31
TUBB3-211ENST00000556536 GLMPQ8WWB7 406 aa13.12□□□□□ -0.31
TUBB3-211ENST00000556536 SLC25A22Q9H936 323 aa13.12□□□□□ -0.31
TUBB3-211ENST00000556536 PLA2G2EQ9NZK7 142 aa13.12□□□□□ -0.31
TUBB3-211ENST00000556536 PFDN2Q9UHV9 154 aa13.12□□□□□ -0.31
TUBB3-211ENST00000556536 TRAV5A0A0B4J249 113 aa13.11□□□□□ -0.31
TUBB3-211ENST00000556536 TPT1P13693 172 aaKnown RBP13.11□□□□□ -0.31
TUBB3-211ENST00000556536 BMI1P35226 326 aa13.11□□□□□ -0.31
TUBB3-211ENST00000556536 SERF2P84101 59 aa13.11□□□□□ -0.31
TUBB3-211ENST00000556536 FAM90A2PQ658T7 463 aa13.11□□□□□ -0.31
TUBB3-211ENST00000556536 TCF24Q7RTU0 167 aa13.11□□□□□ -0.31
TUBB3-211ENST00000556536 SLC51BQ86UW2 128 aa13.11□□□□□ -0.31
TUBB3-211ENST00000556536 TMEM61Q8N0U2 210 aa13.11□□□□□ -0.31
TUBB3-211ENST00000556536 GRAMD2BQ96HH9 432 aa13.11□□□□□ -0.31
TUBB3-211ENST00000556536 TMEM231Q9H6L2 316 aa13.11□□□□□ -0.31
TUBB3-211ENST00000556536 SEPSECSQ9HD40 501 aaKnown RBP13.11□□□□□ -0.31
TUBB3-211ENST00000556536 EIF3GO75821 320 aaKnown RBP eCLIP13.1□□□□□ -0.31
TUBB3-211ENST00000556536 M6PRP20645 277 aa13.1□□□□□ -0.31
TUBB3-211ENST00000556536 EIF5AP63241 154 aaKnown RBP13.1□□□□□ -0.31
TUBB3-211ENST00000556536 ACOT6Q3I5F7 207 aaPredicted RBP13.1□□□□□ -0.31
TUBB3-211ENST00000556536 C1orf194Q5T5A4 169 aa13.1□□□□□ -0.31
TUBB3-211ENST00000556536 SAMD5Q5TGI4 173 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms