RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 RNASE7Q9H1E1 156 aaKnown RBP1.66□□□□□ -2.14
SYNE2-210ENST00000553455 MED13Q9UHV7 2174 aa1.66□□□□□ -2.14
SYNE2-210ENST00000553455 VIRMAQ69YN4 1812 aaKnown RBP1.66□□□□□ -2.14
SYNE2-210ENST00000553455 KCPQ6ZWJ8 1503 aa1.66□□□□□ -2.14
SYNE2-210ENST00000553455 RIC1Q4ADV7 1423 aa1.66□□□□□ -2.14
SYNE2-210ENST00000553455 BRWD1Q9NSI6 2320 aa1.65□□□□□ -2.15
SYNE2-210ENST00000553455 HAND1O96004 215 aa1.65□□□□□ -2.15
SYNE2-210ENST00000553455 UBBP0CG47 229 aa1.65□□□□□ -2.15
SYNE2-210ENST00000553455 SMIM10L2AP0DMW4 78 aa1.65□□□□□ -2.15
SYNE2-210ENST00000553455 SMIM10L2BP0DMW5 78 aa1.65□□□□□ -2.15
SYNE2-210ENST00000553455 CDK10Q15131 360 aa1.65□□□□□ -2.15
SYNE2-210ENST00000553455 BORCS7Q96B45 105 aa1.65□□□□□ -2.15
SYNE2-210ENST00000553455 C14orf105Q9NVL8 296 aa1.65□□□□□ -2.15
SYNE2-210ENST00000553455 DLG5Q8TDM6 1919 aa1.65□□□□□ -2.15
SYNE2-210ENST00000553455 C4BP0C0L5 1744 aa1.65□□□□□ -2.15
SYNE2-210ENST00000553455 PCNTO95613 3336 aa1.65□□□□□ -2.15
SYNE2-210ENST00000553455 KDM3BQ7LBC6 1761 aa1.64□□□□□ -2.15
SYNE2-210ENST00000553455 TJP1Q07157 1748 aa1.64□□□□□ -2.15
SYNE2-210ENST00000553455 DOT1LQ8TEK3 1739 aa1.64□□□□□ -2.15
SYNE2-210ENST00000553455 KIAA1551Q9HCM1 1747 aa1.64□□□□□ -2.15
SYNE2-210ENST00000553455 CEP350Q5VT06 3117 aa1.64□□□□□ -2.15
SYNE2-210ENST00000553455 hADV38S2A0JD32 116 aa1.64□□□□□ -2.15
SYNE2-210ENST00000553455 IGKV2-29A2NJV5 120 aaPredicted RBP1.64□□□□□ -2.15
SYNE2-210ENST00000553455 FADS1O60427 444 aa1.64□□□□□ -2.15
SYNE2-210ENST00000553455 IFNA10P01566 189 aa1.64□□□□□ -2.15
SYNE2-210ENST00000553455 AP3S2P59780 193 aa1.64□□□□□ -2.15
SYNE2-210ENST00000553455 FADDQ13158 208 aa1.64□□□□□ -2.15
SYNE2-210ENST00000553455 ZNF846Q147U1 533 aa1.64□□□□□ -2.15
SYNE2-210ENST00000553455 TMEM97Q5BJF2 176 aa1.64□□□□□ -2.15
SYNE2-210ENST00000553455 Q6ZQT0 140 aa1.64□□□□□ -2.15
SYNE2-210ENST00000553455 CLVS1Q8IUQ0 354 aaPredicted RBP1.64□□□□□ -2.15
SYNE2-210ENST00000553455 C15orf53Q8NAA6 179 aa1.64□□□□□ -2.15
SYNE2-210ENST00000553455 OR52R1Q8NGF1 315 aa1.64□□□□□ -2.15
SYNE2-210ENST00000553455 YIPF3Q9GZM5 350 aa1.64□□□□□ -2.15
SYNE2-210ENST00000553455 IDI2-AS1Q9NZ38 188 aa1.64□□□□□ -2.15
SYNE2-210ENST00000553455 GLTPQ9NZD2 209 aa1.64□□□□□ -2.15
SYNE2-210ENST00000553455 SBF1O95248 1867 aa1.64□□□□□ -2.15
SYNE2-210ENST00000553455 C10orf71Q711Q0 1435 aa1.64□□□□□ -2.15
SYNE2-210ENST00000553455 NUP98P52948 1817 aa1.63□□□□□ -2.15
SYNE2-210ENST00000553455 AFDNP55196 1824 aaKnown RBP1.63□□□□□ -2.15
SYNE2-210ENST00000553455 ARFGEF1Q9Y6D6 1849 aa1.63□□□□□ -2.15
SYNE2-210ENST00000553455 FER1L6Q2WGJ9 1857 aa1.63□□□□□ -2.15
SYNE2-210ENST00000553455 RTL9Q8NET4 1388 aa1.63□□□□□ -2.15
SYNE2-210ENST00000553455 OR2J2O76002 312 aa1.63□□□□□ -2.15
SYNE2-210ENST00000553455 CTSDP07339 412 aaPredicted RBP1.63□□□□□ -2.15
SYNE2-210ENST00000553455 HTR1AP08908 422 aa1.63□□□□□ -2.15
SYNE2-210ENST00000553455 CDC42P60953 191 aa1.63□□□□□ -2.15
SYNE2-210ENST00000553455 HIST1H3AP68431 136 aa1.63□□□□□ -2.15
SYNE2-210ENST00000553455 H3F3AP84243 136 aa1.63□□□□□ -2.15
SYNE2-210ENST00000553455 MIR17HGQ75NE6 70 aa1.63□□□□□ -2.15
SYNE2-210ENST00000553455 Q8N2B8 174 aa1.63□□□□□ -2.15
SYNE2-210ENST00000553455 WFDC11Q8NEX6 87 aa1.63□□□□□ -2.15
SYNE2-210ENST00000553455 ITFG2Q969R8 447 aa1.63□□□□□ -2.15
SYNE2-210ENST00000553455 CMSS1Q9BQ75 279 aaKnown RBP1.63□□□□□ -2.15
SYNE2-210ENST00000553455 UQCC1Q9NVA1 299 aa1.63□□□□□ -2.15
SYNE2-210ENST00000553455 CKLFQ9UBR5 152 aa1.63□□□□□ -2.15
SYNE2-210ENST00000553455 FBXO5Q9UKT4 447 aa1.63□□□□□ -2.15
SYNE2-210ENST00000553455 ZNF609O15014 1411 aa1.63□□□□□ -2.15
SYNE2-210ENST00000553455 C4AP0C0L4 1744 aa1.63□□□□□ -2.15
SYNE2-210ENST00000553455 ANKRD36CQ5JPF3 1778 aa1.62□□□□□ -2.15
SYNE2-210ENST00000553455 PIRO00625 290 aa1.62□□□□□ -2.15
SYNE2-210ENST00000553455 MRPS14O60783 128 aaKnown RBP1.62□□□□□ -2.15
SYNE2-210ENST00000553455 ZNF682O95780 498 aa1.62□□□□□ -2.15
SYNE2-210ENST00000553455 CRYGAP11844 174 aa1.62□□□□□ -2.15
SYNE2-210ENST00000553455 C12orf74Q32Q52 190 aa1.62□□□□□ -2.15
SYNE2-210ENST00000553455 UNQ6190/PRO20217Q6UXQ8 127 aa1.62□□□□□ -2.15
SYNE2-210ENST00000553455 SMIM5Q71RC9 77 aa1.62□□□□□ -2.15
SYNE2-210ENST00000553455 AAED1Q7RTV5 226 aa1.62□□□□□ -2.15
SYNE2-210ENST00000553455 CT55Q8WUE5 264 aa1.62□□□□□ -2.15
SYNE2-210ENST00000553455 DNAJC9Q8WXX5 260 aa1.62□□□□□ -2.15
SYNE2-210ENST00000553455 ADAT1Q9BUB4 502 aaKnown RBP1.62□□□□□ -2.15
SYNE2-210ENST00000553455 TRIM4Q9C037 500 aa1.62□□□□□ -2.15
SYNE2-210ENST00000553455 TLNRD1Q9H1K6 362 aa1.62□□□□□ -2.15
SYNE2-210ENST00000553455 ANKRD31Q8N7Z5 1873 aa1.62□□□□□ -2.15
SYNE2-210ENST00000553455 DLEC1Q9Y238 1755 aa1.62□□□□□ -2.15
SYNE2-210ENST00000553455 ARFGEF2Q9Y6D5 1785 aa1.62□□□□□ -2.15
SYNE2-210ENST00000553455 MYOFQ9NZM1 2061 aa1.62□□□□□ -2.15
SYNE2-210ENST00000553455 RP1P56715 2156 aa1.61□□□□□ -2.15
SYNE2-210ENST00000553455 IGKV1D-42A0A075B6H8 117 aa1.61□□□□□ -2.15
SYNE2-210ENST00000553455 TMEM212A6NML5 194 aa1.61□□□□□ -2.15
SYNE2-210ENST00000553455 RBP1P09455 135 aa1.61□□□□□ -2.15
SYNE2-210ENST00000553455 ZNF826PQ6ZT77 177 aa1.61□□□□□ -2.15
SYNE2-210ENST00000553455 OR6V1Q8N148 313 aa1.61□□□□□ -2.15
SYNE2-210ENST00000553455 GDPD1Q8N9F7 314 aa1.61□□□□□ -2.15
SYNE2-210ENST00000553455 SLC39A9Q9NUM3 307 aa1.61□□□□□ -2.15
SYNE2-210ENST00000553455 CYSLTR1Q9Y271 337 aa1.61□□□□□ -2.15
SYNE2-210ENST00000553455 ERGIC3Q9Y282 383 aa1.61□□□□□ -2.15
SYNE2-210ENST00000553455 HEATR5BQ9P2D3 2071 aa1.61□□□□□ -2.15
SYNE2-210ENST00000553455 LAMB4A4D0S4 1761 aa1.61□□□□□ -2.15
SYNE2-210ENST00000553455 BCORQ6W2J9 1755 aa1.61□□□□□ -2.15
SYNE2-210ENST00000553455 N4BP2Q86UW6 1770 aaPredicted RBP1.6□□□□□ -2.15
SYNE2-210ENST00000553455 PDE6DO43924 150 aa1.6□□□□□ -2.15
SYNE2-210ENST00000553455 LYNX1P0DP58 116 aa1.6□□□□□ -2.15
SYNE2-210ENST00000553455 FKBP2P26885 142 aaKnown RBP1.6□□□□□ -2.15
SYNE2-210ENST00000553455 FKBP1CQ5VVH2 108 aa1.6□□□□□ -2.15
SYNE2-210ENST00000553455 DEFB128Q7Z7B8 93 aa1.6□□□□□ -2.15
SYNE2-210ENST00000553455 GINS4Q9BRT9 223 aa1.6□□□□□ -2.15
SYNE2-210ENST00000553455 CCDC90BQ9GZT6 254 aa1.6□□□□□ -2.15
SYNE2-210ENST00000553455 MICAL3Q7RTP6 2002 aa1.6□□□□□ -2.15
SYNE2-210ENST00000553455 SCN7AQ01118 1682 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms