RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 L7N2F9 121 aa8.7□□□□□ -1.02
CKAP4-202ENST00000552828 GOSR2O14653 212 aa8.7□□□□□ -1.02
CKAP4-202ENST00000552828 ZNF207O43670 478 aaKnown RBP8.7□□□□□ -1.02
CKAP4-202ENST00000552828 TSC22D2O75157 780 aa8.7□□□□□ -1.02
CKAP4-202ENST00000552828 DEDDO75618 318 aa8.7□□□□□ -1.02
CKAP4-202ENST00000552828 RPL35AP18077 110 aaKnown RBP8.7□□□□□ -1.02
CKAP4-202ENST00000552828 AP2S1P53680 142 aaPredicted RBP8.7□□□□□ -1.02
CKAP4-202ENST00000552828 PAX9P55771 341 aa8.7□□□□□ -1.02
CKAP4-202ENST00000552828 CMC4P56277 68 aaPredicted RBP8.7□□□□□ -1.02
CKAP4-202ENST00000552828 YPEL3P61236 119 aaPredicted RBP8.7□□□□□ -1.02
CKAP4-202ENST00000552828 VAMP2P63027 116 aa8.7□□□□□ -1.02
CKAP4-202ENST00000552828 GAMTQ14353 236 aa8.7□□□□□ -1.02
CKAP4-202ENST00000552828 GATAD1Q8WUU5 269 aa8.7□□□□□ -1.02
CKAP4-202ENST00000552828 CSTL1Q9H114 145 aa8.7□□□□□ -1.02
CKAP4-202ENST00000552828 SMPXQ9UHP9 88 aa8.7□□□□□ -1.02
CKAP4-202ENST00000552828 RCL1Q9Y2P8 373 aaKnown RBP8.7□□□□□ -1.02
CKAP4-202ENST00000552828 LSM5Q9Y4Y9 91 aaKnown RBP8.7□□□□□ -1.02
CKAP4-202ENST00000552828 IGHV7-4-1A0A0J9YVY3 117 aa8.69□□□□□ -1.02
CKAP4-202ENST00000552828 ZFP92A6NM28 416 aa8.69□□□□□ -1.02
CKAP4-202ENST00000552828 K7EPK0 472 aa8.69□□□□□ -1.02
CKAP4-202ENST00000552828 PVALBP20472 110 aaPredicted RBP8.69□□□□□ -1.02
CKAP4-202ENST00000552828 IL15RAQ13261 267 aa8.69□□□□□ -1.02
CKAP4-202ENST00000552828 RNF2Q99496 336 aa8.69□□□□□ -1.02
CKAP4-202ENST00000552828 C11orf68Q9H3H3 251 aaKnown RBP8.69□□□□□ -1.02
CKAP4-202ENST00000552828 ZFAND3Q9H8U3 227 aa8.69□□□□□ -1.02
CKAP4-202ENST00000552828 MED9Q9NWA0 146 aa8.69□□□□□ -1.02
CKAP4-202ENST00000552828 PRSS46E5RG02 174 aa8.68□□□□□ -1.02
CKAP4-202ENST00000552828 CHEK1O14757 476 aa8.68□□□□□ -1.02
CKAP4-202ENST00000552828 SIX6O95475 246 aa8.68□□□□□ -1.02
CKAP4-202ENST00000552828 MPC2O95563 127 aa8.68□□□□□ -1.02
CKAP4-202ENST00000552828 FABP1P07148 127 aa8.68□□□□□ -1.02
CKAP4-202ENST00000552828 METTL15P1P0C7V9 234 aa8.68□□□□□ -1.02
CKAP4-202ENST00000552828 RD3LP0DJH9 198 aa8.68□□□□□ -1.02
CKAP4-202ENST00000552828 NPPCP23582 126 aa8.68□□□□□ -1.02
CKAP4-202ENST00000552828 S100A10P60903 97 aa8.68□□□□□ -1.02
CKAP4-202ENST00000552828 RAB14P61106 215 aa8.68□□□□□ -1.02
CKAP4-202ENST00000552828 CYCSP99999 105 aaKnown RBP8.68□□□□□ -1.02
CKAP4-202ENST00000552828 OPCMLQ14982 345 aa8.68□□□□□ -1.02
CKAP4-202ENST00000552828 OR8G2PQ6IF36 304 aa8.68□□□□□ -1.02
CKAP4-202ENST00000552828 TMEM14EPQ6UXP3 125 aa8.68□□□□□ -1.02
CKAP4-202ENST00000552828 APRG1Q8IVJ8 170 aa8.68□□□□□ -1.02
CKAP4-202ENST00000552828 METTL26Q96S19 204 aa8.68□□□□□ -1.02
CKAP4-202ENST00000552828 RARRES2Q99969 163 aa8.68□□□□□ -1.02
CKAP4-202ENST00000552828 RHPN1-AS1Q9BWJ2 59 aa8.68□□□□□ -1.02
CKAP4-202ENST00000552828 MFFQ9GZY8 342 aa8.68□□□□□ -1.02
CKAP4-202ENST00000552828 FAT2Q9NYQ8 4349 aa8.67□□□□□ -1.02
CKAP4-202ENST00000552828 IGHV3-49A0A0A0MS15 119 aa8.67□□□□□ -1.02
CKAP4-202ENST00000552828 A0A1W2PS18 150 aa8.67□□□□□ -1.02
CKAP4-202ENST00000552828 PMS2P5A8MQ11 134 aa8.67□□□□□ -1.02
CKAP4-202ENST00000552828 TOMM40O96008 361 aa8.67□□□□□ -1.02
CKAP4-202ENST00000552828 M6PRP20645 277 aa8.67□□□□□ -1.02
CKAP4-202ENST00000552828 TCTAP57738 103 aa8.67□□□□□ -1.02
CKAP4-202ENST00000552828 NANOS2P60321 138 aaKnown RBP8.67□□□□□ -1.02
CKAP4-202ENST00000552828 RAB32Q13637 225 aa8.67□□□□□ -1.02
CKAP4-202ENST00000552828 FAM90A2PQ658T7 463 aa8.67□□□□□ -1.02
CKAP4-202ENST00000552828 ACOT7LQ6ZUV0 252 aa8.67□□□□□ -1.02
CKAP4-202ENST00000552828 CCDC28AQ8IWP9 274 aa8.67□□□□□ -1.02
CKAP4-202ENST00000552828 OR10P1Q8NGE3 313 aa8.67□□□□□ -1.02
CKAP4-202ENST00000552828 C11orf45Q8TAV5 145 aa8.67□□□□□ -1.02
CKAP4-202ENST00000552828 NARS2Q96I59 477 aaKnown RBP8.67□□□□□ -1.02
CKAP4-202ENST00000552828 NMES1Q9C002 83 aa8.67□□□□□ -1.02
CKAP4-202ENST00000552828 RYR1P21817 5038 aa8.67□□□□□ -1.02
CKAP4-202ENST00000552828 DNAH2Q9P225 4427 aa8.66□□□□□ -1.02
CKAP4-202ENST00000552828 IGKV1D-37A0A075B6S9 117 aa8.66□□□□□ -1.02
CKAP4-202ENST00000552828 SMCO3A2RU48 225 aa8.66□□□□□ -1.02
CKAP4-202ENST00000552828 RLN2P04090 185 aa8.66□□□□□ -1.02
CKAP4-202ENST00000552828 IL4P05112 153 aa8.66□□□□□ -1.02
CKAP4-202ENST00000552828 CD5P06127 495 aa8.66□□□□□ -1.02
CKAP4-202ENST00000552828 PSG1P11464 419 aa8.66□□□□□ -1.02
CKAP4-202ENST00000552828 CAV2P51636 162 aa8.66□□□□□ -1.02
CKAP4-202ENST00000552828 DLK1P80370 383 aa8.66□□□□□ -1.02
CKAP4-202ENST00000552828 PRR20EP86478 221 aa8.66□□□□□ -1.02
CKAP4-202ENST00000552828 PRR20CP86479 221 aa8.66□□□□□ -1.02
CKAP4-202ENST00000552828 PRR20DP86480 221 aa8.66□□□□□ -1.02
CKAP4-202ENST00000552828 PRR20BP86481 221 aa8.66□□□□□ -1.02
CKAP4-202ENST00000552828 PRR20AP86496 221 aa8.66□□□□□ -1.02
CKAP4-202ENST00000552828 AKR1C1Q04828 323 aa8.66□□□□□ -1.02
CKAP4-202ENST00000552828 ZNF124Q15973 351 aa8.66□□□□□ -1.02
CKAP4-202ENST00000552828 THAP8Q8NA92 274 aa8.66□□□□□ -1.02
CKAP4-202ENST00000552828 OR51G1Q8NGK1 321 aa8.66□□□□□ -1.02
CKAP4-202ENST00000552828 OR11H2Q8NH07 326 aa8.66□□□□□ -1.02
CKAP4-202ENST00000552828 TRGV9Q99603 122 aa8.66□□□□□ -1.02
CKAP4-202ENST00000552828 TMEM231Q9H6L2 316 aa8.66□□□□□ -1.02
CKAP4-202ENST00000552828 DNAH17Q9UFH2 4485 aa8.66□□□□□ -1.02
CKAP4-202ENST00000552828 IGHV3OR16-13A0A075B7E8 117 aa8.65□□□□□ -1.02
CKAP4-202ENST00000552828 IGHV3-74A0A0B4J1X5 117 aa8.65□□□□□ -1.02
CKAP4-202ENST00000552828 FNDC10F2Z333 226 aa8.65□□□□□ -1.02
CKAP4-202ENST00000552828 CXCL2P19875 107 aa8.65□□□□□ -1.02
CKAP4-202ENST00000552828 CRYBB3P26998 211 aa8.65□□□□□ -1.02
CKAP4-202ENST00000552828 S100A11P31949 105 aa8.65□□□□□ -1.02
CKAP4-202ENST00000552828 H2BFSP57053 126 aa8.65□□□□□ -1.02
CKAP4-202ENST00000552828 ZNF90Q03938 601 aa8.65□□□□□ -1.02
CKAP4-202ENST00000552828 TMEM144Q7Z5S9 345 aa8.65□□□□□ -1.02
CKAP4-202ENST00000552828 C2CD4CQ8TF44 421 aa8.65□□□□□ -1.02
CKAP4-202ENST00000552828 ST8SIA2Q92186 375 aa8.65□□□□□ -1.02
CKAP4-202ENST00000552828 GRAMD2BQ96HH9 432 aa8.65□□□□□ -1.02
CKAP4-202ENST00000552828 GGACTQ9BVM4 153 aa8.65□□□□□ -1.02
CKAP4-202ENST00000552828 C11orf1Q9H5F2 150 aa8.65□□□□□ -1.02
CKAP4-202ENST00000552828 VSIRQ9H7M9 311 aa8.65□□□□□ -1.02
CKAP4-202ENST00000552828 LYRM2Q9NU23 88 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms