RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 A0A1B0GUT8 65 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 PGPA6NDG6 321 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 OR4C46A6NHA9 309 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 TMEM178BH3BS89 294 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 K7EM74 188 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 SCGB2A1O75556 95 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 NDUFB8O95169 186 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 CRYGBP07316 175 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 IGLL1P15814 213 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 PLA2G5P39877 138 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 CDKN1BP46527 198 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 SEC11AP67812 179 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 HIST1H1AQ02539 215 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-225ENST00000545920 WT1-ASQ06250 92 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 TCF15Q12870 199 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 PLGLAQ15195 96 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 TMEM155Q4W5P6 130 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 LCE5AQ5TCM9 118 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 EBLN2Q6P2I7 272 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 COX8CQ7Z4L0 72 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 CIARTQ8N365 385 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-225ENST00000545920 FAM216BQ8N7L0 139 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 OR4F17Q8NGA8 305 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 OR2T6Q8NHC8 308 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 FAM57AQ8TBR7 257 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 H1FXQ92522 213 aaKnown RBP5.17□□□□□ -1.58
SNHG1-225ENST00000545920 LEAP2Q969E1 77 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 ZNF48Q96MX3 618 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-225ENST00000545920 RAB1BQ9H0U4 201 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 JKAMPQ9P055 326 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 F11RQ9Y624 299 aaKnown RBP5.17□□□□□ -1.58
SNHG1-225ENST00000545920 A0A0C4DFX4 3053 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 C5orf42Q9H799 3197 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 MKI67P46013 3256 aaKnown RBP5.16□□□□□ -1.58
SNHG1-225ENST00000545920 TRAV5A0A0B4J249 113 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 A0A1W2PPI3 338 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 CGB1A6NKQ9 187 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 A6NNC1 897 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 SIVA1O15304 175 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 NKX2-8O15522 239 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 TCF21O43680 179 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 CD5LO43866 347 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 SPINK4O60575 86 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 MOSP00540 346 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 FRMD6-AS1P0C7T7 363 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 PYYP10082 97 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 GATA2P23769 480 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-225ENST00000545920 CEACAM3P40198 252 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 DLX6P56179 175 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 LPAL2Q16609 132 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 Q56UQ5 140 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 FAM120AOSQ5T036 256 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 ATP1A1-AS1Q5TC04 95 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 GDF5OSQ5U4N7 250 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 LINC01545Q5VT33 79 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 ZNF493Q6ZR52 646 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 MOB3BQ86TA1 216 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 Q86TA4 180 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 BPIFA4PQ86YQ2 179 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 FAM19A2Q8N3H0 131 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 DEFB125Q8N687 156 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 OR10W1Q8NGF6 305 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 OR10AG1Q8NH19 301 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 FAM168AQ92567 244 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 GUCD1Q96NT3 240 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 Q9H3A6 140 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 FAM215AQ9Y5M1 114 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 DNAJC13O75165 2243 aa5.16□□□□□ -1.58
SNHG1-225ENST00000545920 IGHV1-24A0A0C4DH33 117 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 SHISA9B4DS77 424 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 C16orf97H3BN30 126 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 J3KRW8 73 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 IGHV3-7P01780 117 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 PPBPP02775 128 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 PLA2G1BP04054 148 aaKnown RBP5.15□□□□□ -1.59
SNHG1-225ENST00000545920 CT45A10P0DMU9 189 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 IGHV1-8P0DP01 117 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 MYOD1P15172 320 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 CAMPP49913 170 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 SLC35B1P78383 322 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 ADIPOQQ15848 244 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 MORN5Q5VZ52 161 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 RPRMLQ8N4K4 120 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 DEFB108BQ8NET1 73 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 OR4C5Q8NGB2 326 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 OR9G4Q8NGQ1 327 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 OR1B1Q8NGR6 318 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 PIFOQ8TCI5 191 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 IGFBPL1Q8WX77 278 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 RND1Q92730 232 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 SHANK2-AS3Q9BTD1 123 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 SSBP3Q9BWW4 388 aaPredicted RBP5.15□□□□□ -1.59
SNHG1-225ENST00000545920 TMEM133Q9H2Q1 129 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 SCRT2Q9NQ03 307 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 PEF1Q9UBV8 284 aaKnown RBP5.15□□□□□ -1.59
SNHG1-225ENST00000545920 SIGLEC9Q9Y336 463 aa5.15□□□□□ -1.59
SNHG1-225ENST00000545920 YLPM1P49750 1951 aaKnown RBP5.15□□□□□ -1.59
SNHG1-225ENST00000545920 AHCTF1Q8WYP5 2266 aa5.14□□□□□ -1.59
SNHG1-225ENST00000545920 CACNA1DQ01668 2161 aa5.14□□□□□ -1.59
SNHG1-225ENST00000545920 TRAV34A0A0B4J273 112 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms