RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 GGTLC1Q9BX51 225 aa12.84□□□□□ -0.35
RABGGTA-203ENST00000543002 G3V3Q6 166 aa12.83□□□□□ -0.36
RABGGTA-203ENST00000543002 PXDC1Q5TGL8 231 aa12.83□□□□□ -0.36
RABGGTA-203ENST00000543002 OR1B1Q8NGR6 318 aa12.83□□□□□ -0.36
RABGGTA-203ENST00000543002 GLMPQ8WWB7 406 aa12.83□□□□□ -0.36
RABGGTA-203ENST00000543002 AQP10Q96PS8 301 aa12.83□□□□□ -0.36
RABGGTA-203ENST00000543002 ATP5SQ99766 215 aa12.83□□□□□ -0.36
RABGGTA-203ENST00000543002 FXYD6-FXYD2A0A087WZ82 144 aa12.82□□□□□ -0.36
RABGGTA-203ENST00000543002 HELTA6NFD8 242 aa12.82□□□□□ -0.36
RABGGTA-203ENST00000543002 HYPMO75409 117 aa12.82□□□□□ -0.36
RABGGTA-203ENST00000543002 S100A7P31151 101 aa12.82□□□□□ -0.36
RABGGTA-203ENST00000543002 RPL29P47914 159 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-203ENST00000543002 PRR20EP86478 221 aa12.82□□□□□ -0.36
RABGGTA-203ENST00000543002 PRR20CP86479 221 aa12.82□□□□□ -0.36
RABGGTA-203ENST00000543002 PRR20DP86480 221 aa12.82□□□□□ -0.36
RABGGTA-203ENST00000543002 PRR20BP86481 221 aa12.82□□□□□ -0.36
RABGGTA-203ENST00000543002 PRR20AP86496 221 aa12.82□□□□□ -0.36
RABGGTA-203ENST00000543002 OPCMLQ14982 345 aa12.82□□□□□ -0.36
RABGGTA-203ENST00000543002 C1orf194Q5T5A4 169 aa12.82□□□□□ -0.36
RABGGTA-203ENST00000543002 PPP1R14BQ96C90 147 aa12.82□□□□□ -0.36
RABGGTA-203ENST00000543002 SMIM3Q9BZL3 60 aa12.82□□□□□ -0.36
RABGGTA-203ENST00000543002 WDR61Q9GZS3 305 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-203ENST00000543002 ARL6Q9H0F7 186 aa12.82□□□□□ -0.36
RABGGTA-203ENST00000543002 DOK5Q9P104 306 aa12.82□□□□□ -0.36
RABGGTA-203ENST00000543002 OR4C46A6NHA9 309 aa12.81□□□□□ -0.36
RABGGTA-203ENST00000543002 CD7P09564 240 aa12.81□□□□□ -0.36
RABGGTA-203ENST00000543002 CD81P60033 236 aa12.81□□□□□ -0.36
RABGGTA-203ENST00000543002 RPL11P62913 178 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-203ENST00000543002 PAFAH1B2P68402 229 aa12.81□□□□□ -0.36
RABGGTA-203ENST00000543002 MIC13Q5XKP0 118 aa12.81□□□□□ -0.36
RABGGTA-203ENST00000543002 NEURL2Q9BR09 285 aa12.81□□□□□ -0.36
RABGGTA-203ENST00000543002 TNFSF18Q9UNG2 199 aa12.81□□□□□ -0.36
RABGGTA-203ENST00000543002 HIGD1AQ9Y241 93 aa12.81□□□□□ -0.36
RABGGTA-203ENST00000543002 SMAD5-AS1Q9Y6J3 95 aa12.81□□□□□ -0.36
RABGGTA-203ENST00000543002 IGKV3-7A0A075B6H7 116 aa12.8□□□□□ -0.36
RABGGTA-203ENST00000543002 OR5G3P0C626 314 aa12.8□□□□□ -0.36
RABGGTA-203ENST00000543002 AP2S1P53680 142 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-203ENST00000543002 DEFB121Q5J5C9 76 aa12.8□□□□□ -0.36
RABGGTA-203ENST00000543002 PATE2Q6UY27 113 aa12.8□□□□□ -0.36
RABGGTA-203ENST00000543002 GBGT1Q8N5D6 347 aa12.8□□□□□ -0.36
RABGGTA-203ENST00000543002 INO80EQ8NBZ0 244 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-203ENST00000543002 NPCDR1Q9BY65 106 aa12.8□□□□□ -0.36
RABGGTA-203ENST00000543002 MS4A6AQ9H2W1 248 aa12.8□□□□□ -0.36
RABGGTA-203ENST00000543002 WFDC1Q9HC57 220 aa12.8□□□□□ -0.36
RABGGTA-203ENST00000543002 FBXL17Q9UF56 701 aa12.8□□□□□ -0.36
RABGGTA-203ENST00000543002 TRAV2A0A0B4J234 112 aa12.79□□□□□ -0.36
RABGGTA-203ENST00000543002 ZNF98A6NK75 572 aa12.79□□□□□ -0.36
RABGGTA-203ENST00000543002 H3BRN7 92 aa12.79□□□□□ -0.36
RABGGTA-203ENST00000543002 IFNA5P01569 189 aa12.79□□□□□ -0.36
RABGGTA-203ENST00000543002 TFPI2P48307 235 aa12.79□□□□□ -0.36
RABGGTA-203ENST00000543002 SIGLEC15Q6ZMC9 328 aa12.79□□□□□ -0.36
RABGGTA-203ENST00000543002 Q6ZRG5 221 aa12.79□□□□□ -0.36
RABGGTA-203ENST00000543002 S100A7AQ86SG5 101 aa12.79□□□□□ -0.36
RABGGTA-203ENST00000543002 SHANK2-AS3Q9BTD1 123 aa12.79□□□□□ -0.36
RABGGTA-203ENST00000543002 SLC25A39Q9BZJ4 359 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-203ENST00000543002 ARV1Q9H2C2 271 aa12.79□□□□□ -0.36
RABGGTA-203ENST00000543002 SLC39A9Q9NUM3 307 aa12.79□□□□□ -0.36
RABGGTA-203ENST00000543002 PXMP4Q9Y6I8 212 aa12.79□□□□□ -0.36
RABGGTA-203ENST00000543002 ELOA3CA0A087WX78 387 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-203ENST00000543002 RNF222A6NCQ9 220 aa12.78□□□□□ -0.36
RABGGTA-203ENST00000543002 SMLR1H3BR10 107 aa12.78□□□□□ -0.36
RABGGTA-203ENST00000543002 DNASE2O00115 360 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-203ENST00000543002 COX7A2P2O60397 106 aa12.78□□□□□ -0.36
RABGGTA-203ENST00000543002 B2MP61769 119 aa12.78□□□□□ -0.36
RABGGTA-203ENST00000543002 OR8I2Q8N0Y5 310 aa12.78□□□□□ -0.36
RABGGTA-203ENST00000543002 STXBP6Q8NFX7 210 aa12.78□□□□□ -0.36
RABGGTA-203ENST00000543002 SCGB1C1Q8TD33 95 aa12.78□□□□□ -0.36
RABGGTA-203ENST00000543002 PARD6GQ9BYG4 376 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-203ENST00000543002 C19orf73Q9NVV2 129 aa12.78□□□□□ -0.36
RABGGTA-203ENST00000543002 WFDC3Q8IUB2 231 aa12.77□□□□□ -0.37
RABGGTA-203ENST00000543002 ZNF709Q8N972 641 aa12.77□□□□□ -0.37
RABGGTA-203ENST00000543002 TMEM37Q8WXS4 190 aa12.77□□□□□ -0.37
RABGGTA-203ENST00000543002 UHRF2Q96PU4 802 aa12.77□□□□□ -0.37
RABGGTA-203ENST00000543002 FAM110AQ9BQ89 295 aa12.77□□□□□ -0.37
RABGGTA-203ENST00000543002 SCRT1Q9BWW7 348 aa12.77□□□□□ -0.37
RABGGTA-203ENST00000543002 SLC25A22Q9H936 323 aa12.77□□□□□ -0.37
RABGGTA-203ENST00000543002 DNAJC4Q9NNZ3 241 aa12.77□□□□□ -0.37
RABGGTA-203ENST00000543002 KCNIP2Q9NS61 270 aa12.77□□□□□ -0.37
RABGGTA-203ENST00000543002 hCG_2014768A0A024R1R8 64 aa12.76□□□□□ -0.37
RABGGTA-203ENST00000543002 A8MZ25 164 aa12.76□□□□□ -0.37
RABGGTA-203ENST00000543002 OR11H12B2RN74 326 aa12.76□□□□□ -0.37
RABGGTA-203ENST00000543002 C17orf112F2Z3M2 114 aa12.76□□□□□ -0.37
RABGGTA-203ENST00000543002 K7EQG2 157 aa12.76□□□□□ -0.37
RABGGTA-203ENST00000543002 IGHV4-30-4P0DP06 118 aa12.76□□□□□ -0.37
RABGGTA-203ENST00000543002 CMC4P56277 68 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-203ENST00000543002 C10orf113Q5VZT2 155 aa12.76□□□□□ -0.37
RABGGTA-203ENST00000543002 LEMD1Q68G75 181 aa12.76□□□□□ -0.37
RABGGTA-203ENST00000543002 OR1L4Q8NGR5 311 aa12.76□□□□□ -0.37
RABGGTA-203ENST00000543002 DCANP1Q8TF63 244 aa12.76□□□□□ -0.37
RABGGTA-203ENST00000543002 ST6GAL2Q96JF0 529 aa12.76□□□□□ -0.37
RABGGTA-203ENST00000543002 GPR82Q96P67 336 aa12.76□□□□□ -0.37
RABGGTA-203ENST00000543002 PFDN5Q99471 154 aa12.76□□□□□ -0.37
RABGGTA-203ENST00000543002 SLC25A32Q9H2D1 315 aa12.76□□□□□ -0.37
RABGGTA-203ENST00000543002 NRN1Q9NPD7 142 aa12.76□□□□□ -0.37
RABGGTA-203ENST00000543002 RNF24Q9Y225 148 aa12.76□□□□□ -0.37
RABGGTA-203ENST00000543002 ARPC5O15511 151 aa12.75□□□□□ -0.37
RABGGTA-203ENST00000543002 ZNF266Q14584 549 aa12.75□□□□□ -0.37
RABGGTA-203ENST00000543002 ODF3L2Q3SX64 289 aa12.75□□□□□ -0.37
RABGGTA-203ENST00000543002 LINC00305Q7Z4B0 112 aa12.75□□□□□ -0.37
RABGGTA-203ENST00000543002 DEFB125Q8N687 156 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms