RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 SLC25A31Q9H0C2 315 aa8.14□□□□□ -1.11
NPIPB3-210ENST00000542817 ZFAND3Q9H8U3 227 aa8.14□□□□□ -1.11
NPIPB3-210ENST00000542817 CYTL1Q9NRR1 136 aa8.14□□□□□ -1.11
NPIPB3-210ENST00000542817 WDR83OSQ9Y284 106 aa8.14□□□□□ -1.11
NPIPB3-210ENST00000542817 MEGF8Q7Z7M0 2845 aa8.13□□□□□ -1.11
NPIPB3-210ENST00000542817 GNG7O60262 68 aa8.13□□□□□ -1.11
NPIPB3-210ENST00000542817 SYNJ2BPP57105 145 aa8.13□□□□□ -1.11
NPIPB3-210ENST00000542817 TMEM88Q6PEY1 159 aa8.13□□□□□ -1.11
NPIPB3-210ENST00000542817 SPSB3Q6PJ21 355 aa8.13□□□□□ -1.11
NPIPB3-210ENST00000542817 TOMM20LQ6UXN7 152 aa8.13□□□□□ -1.11
NPIPB3-210ENST00000542817 REC114Q7Z4M0 266 aa8.13□□□□□ -1.11
NPIPB3-210ENST00000542817 STX12Q86Y82 276 aa8.13□□□□□ -1.11
NPIPB3-210ENST00000542817 CBLN2Q8IUK8 224 aa8.13□□□□□ -1.11
NPIPB3-210ENST00000542817 STPG3Q8N7X2 389 aa8.13□□□□□ -1.11
NPIPB3-210ENST00000542817 SLC35E1Q96K37 410 aa8.13□□□□□ -1.11
NPIPB3-210ENST00000542817 TRGV9Q99603 122 aa8.13□□□□□ -1.11
NPIPB3-210ENST00000542817 MGST2Q99735 147 aa8.13□□□□□ -1.11
NPIPB3-210ENST00000542817 TMPRSS5Q9H3S3 457 aa8.13□□□□□ -1.11
NPIPB3-210ENST00000542817 SMDT1Q9H4I9 107 aa8.13□□□□□ -1.11
NPIPB3-210ENST00000542817 NPVFQ9HCQ7 196 aa8.13□□□□□ -1.11
NPIPB3-210ENST00000542817 IGHV3OR16-8A0A075B7F1 116 aa8.12□□□□□ -1.11
NPIPB3-210ENST00000542817 TMEM213A2RRL7 107 aa8.12□□□□□ -1.11
NPIPB3-210ENST00000542817 M0QZ24 198 aa8.12□□□□□ -1.11
NPIPB3-210ENST00000542817 LGALS9O00182 355 aa8.12□□□□□ -1.11
NPIPB3-210ENST00000542817 SCAF4O95104 1147 aaKnown RBP8.12□□□□□ -1.11
NPIPB3-210ENST00000542817 LINC00869P0C866 280 aa8.12□□□□□ -1.11
NPIPB3-210ENST00000542817 PSG1P11464 419 aa8.12□□□□□ -1.11
NPIPB3-210ENST00000542817 GATA2P23769 480 aaPredicted RBP8.12□□□□□ -1.11
NPIPB3-210ENST00000542817 SULT1A2P50226 295 aa8.12□□□□□ -1.11
NPIPB3-210ENST00000542817 YPEL3P61236 119 aaPredicted RBP8.12□□□□□ -1.11
NPIPB3-210ENST00000542817 SNRPEP62304 92 aaKnown RBP8.12□□□□□ -1.11
NPIPB3-210ENST00000542817 CLINT1Q14677 625 aa8.12□□□□□ -1.11
NPIPB3-210ENST00000542817 PRR31Q5SQ13 230 aa8.12□□□□□ -1.11
NPIPB3-210ENST00000542817 BTNL8Q6UX41 500 aa8.12□□□□□ -1.11
NPIPB3-210ENST00000542817 TMEM190Q8WZ59 177 aa8.12□□□□□ -1.11
NPIPB3-210ENST00000542817 TMEM147Q9BVK8 224 aa8.12□□□□□ -1.11
NPIPB3-210ENST00000542817 SMIM3Q9BZL3 60 aa8.12□□□□□ -1.11
NPIPB3-210ENST00000542817 TREM1Q9NP99 234 aa8.12□□□□□ -1.11
NPIPB3-210ENST00000542817 GAR1Q9NY12 217 aaKnown RBP8.12□□□□□ -1.11
NPIPB3-210ENST00000542817 FBXL17Q9UF56 701 aa8.12□□□□□ -1.11
NPIPB3-210ENST00000542817 SLC45A2Q9UMX9 530 aa8.12□□□□□ -1.11
NPIPB3-210ENST00000542817 RFNGQ9Y644 331 aa8.12□□□□□ -1.11
NPIPB3-210ENST00000542817 TRAV30A0A087WSZ9 112 aa8.11□□□□□ -1.11
NPIPB3-210ENST00000542817 WI2-2373I1.2A0A1W2PRP0 233 aa8.11□□□□□ -1.11
NPIPB3-210ENST00000542817 A8MWP6 167 aa8.11□□□□□ -1.11
NPIPB3-210ENST00000542817 NDUFA4O00483 81 aa8.11□□□□□ -1.11
NPIPB3-210ENST00000542817 TOMM40O96008 361 aa8.11□□□□□ -1.11
NPIPB3-210ENST00000542817 HBG1P69891 147 aa8.11□□□□□ -1.11
NPIPB3-210ENST00000542817 HBG2P69892 147 aa8.11□□□□□ -1.11
NPIPB3-210ENST00000542817 ATP6V1FQ16864 119 aa8.11□□□□□ -1.11
NPIPB3-210ENST00000542817 RPEL1Q2QD12 228 aa8.11□□□□□ -1.11
NPIPB3-210ENST00000542817 TM4SF20Q53R12 229 aa8.11□□□□□ -1.11
NPIPB3-210ENST00000542817 DPF1Q92782 380 aa8.11□□□□□ -1.11
NPIPB3-210ENST00000542817 HIST1H2BAQ96A08 127 aa8.11□□□□□ -1.11
NPIPB3-210ENST00000542817 NIT2Q9NQR4 276 aa8.11□□□□□ -1.11
NPIPB3-210ENST00000542817 PUS1Q9Y606 427 aaKnown RBP eCLIP8.11□□□□□ -1.11
NPIPB3-210ENST00000542817 PRKDCP78527 4128 aaKnown RBP8.11□□□□□ -1.11
NPIPB3-210ENST00000542817 UBE2L5PA0A1B0GUS4 154 aa8.1□□□□□ -1.11
NPIPB3-210ENST00000542817 ZFP92A6NM28 416 aa8.1□□□□□ -1.11
NPIPB3-210ENST00000542817 AGPAT2O15120 278 aa8.1□□□□□ -1.11
NPIPB3-210ENST00000542817 APOHP02749 345 aaPredicted RBP8.1□□□□□ -1.11
NPIPB3-210ENST00000542817 CSN3P07498 182 aa8.1□□□□□ -1.11
NPIPB3-210ENST00000542817 C8orf88P0DMB2 117 aa8.1□□□□□ -1.11
NPIPB3-210ENST00000542817 PRR20EP86478 221 aa8.1□□□□□ -1.11
NPIPB3-210ENST00000542817 PRR20CP86479 221 aa8.1□□□□□ -1.11
NPIPB3-210ENST00000542817 PRR20DP86480 221 aa8.1□□□□□ -1.11
NPIPB3-210ENST00000542817 PRR20BP86481 221 aa8.1□□□□□ -1.11
NPIPB3-210ENST00000542817 PRR20AP86496 221 aa8.1□□□□□ -1.11
NPIPB3-210ENST00000542817 AKR1C1Q04828 323 aa8.1□□□□□ -1.11
NPIPB3-210ENST00000542817 USF2Q15853 346 aaPredicted RBP8.1□□□□□ -1.11
NPIPB3-210ENST00000542817 LILRB2Q8N423 598 aa8.1□□□□□ -1.11
NPIPB3-210ENST00000542817 ATP5SQ99766 215 aa8.1□□□□□ -1.11
NPIPB3-210ENST00000542817 GGTLC1Q9BX51 225 aa8.1□□□□□ -1.11
NPIPB3-210ENST00000542817 WDR61Q9GZS3 305 aaKnown RBP8.1□□□□□ -1.11
NPIPB3-210ENST00000542817 U3KQE9 123 aa8.1□□□□□ -1.11
NPIPB3-210ENST00000542817 SMCO3A2RU48 225 aa8.09□□□□□ -1.11
NPIPB3-210ENST00000542817 C2orf70A6NJV1 201 aa8.09□□□□□ -1.11
NPIPB3-210ENST00000542817 OVOL1O14753 267 aa8.09□□□□□ -1.11
NPIPB3-210ENST00000542817 PF4P02776 101 aa8.09□□□□□ -1.11
NPIPB3-210ENST00000542817 RD3LP0DJH9 198 aa8.09□□□□□ -1.11
NPIPB3-210ENST00000542817 RAB5CP51148 216 aa8.09□□□□□ -1.11
NPIPB3-210ENST00000542817 PLP1P60201 277 aa8.09□□□□□ -1.11
NPIPB3-210ENST00000542817 RELQ04864 619 aaPredicted RBP8.09□□□□□ -1.11
NPIPB3-210ENST00000542817 TEPPQ6URK8 271 aa8.09□□□□□ -1.11
NPIPB3-210ENST00000542817 PATE2Q6UY27 113 aa8.09□□□□□ -1.11
NPIPB3-210ENST00000542817 CYP2G1PQ6ZSU1 146 aa8.09□□□□□ -1.11
NPIPB3-210ENST00000542817 OR9G4Q8NGQ1 327 aa8.09□□□□□ -1.11
NPIPB3-210ENST00000542817 NPCDR1Q9BY65 106 aa8.09□□□□□ -1.11
NPIPB3-210ENST00000542817 PARD6GQ9BYG4 376 aaPredicted RBP8.09□□□□□ -1.11
NPIPB3-210ENST00000542817 ZNF705EA8MWA4 302 aaPredicted RBP8.08□□□□□ -1.12
NPIPB3-210ENST00000542817 K7EMT4 169 aa8.08□□□□□ -1.12
NPIPB3-210ENST00000542817 WIPF1O43516 503 aa8.08□□□□□ -1.12
NPIPB3-210ENST00000542817 ZNF207O43670 478 aaKnown RBP8.08□□□□□ -1.12
NPIPB3-210ENST00000542817 YIF1AO95070 293 aa8.08□□□□□ -1.12
NPIPB3-210ENST00000542817 HOXA5P20719 270 aa8.08□□□□□ -1.12
NPIPB3-210ENST00000542817 RHEBQ15382 184 aa8.08□□□□□ -1.12
NPIPB3-210ENST00000542817 FAM106AQ4KMX7 169 aa8.08□□□□□ -1.12
NPIPB3-210ENST00000542817 LBHQ53QV2 105 aaPredicted RBP8.08□□□□□ -1.12
NPIPB3-210ENST00000542817 RPL7L1Q6DKI1 246 aaKnown RBP8.08□□□□□ -1.12
NPIPB3-210ENST00000542817 TMEM37Q8WXS4 190 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms