RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 PLP1P60201 277 aa8.59□□□□□ -1.03
SCG3-202ENST00000542355 FAM167A-AS1Q96KT0 104 aa8.59□□□□□ -1.03
SCG3-202ENST00000542355 NKX6-2Q9C056 277 aaPredicted RBP8.59□□□□□ -1.03
SCG3-202ENST00000542355 VPREB3Q9UKI3 123 aa8.59□□□□□ -1.03
SCG3-202ENST00000542355 PUS1Q9Y606 427 aaKnown RBP eCLIP8.59□□□□□ -1.03
SCG3-202ENST00000542355 UNC79Q9P2D8 2635 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 CCDC168Q8NDH2 2452 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 AP4M1O00189 453 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 SNAPINO95295 136 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 TOMM40O96008 361 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 IL4P05112 153 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 CTSGP08311 255 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 PPIFP30405 207 aaKnown RBP8.58□□□□□ -1.04
SCG3-202ENST00000542355 RELQ04864 619 aaPredicted RBP8.58□□□□□ -1.04
SCG3-202ENST00000542355 BTN1A1Q13410 526 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 FAM90A2PQ658T7 463 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 Q8N1Y9 231 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 ZNF502Q8TBZ5 544 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 Q8WTZ3 238 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 DUX5Q96PT3 197 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 C20orf24Q9BUV8 137 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 CHTOPQ9Y3Y2 248 aaKnown RBP8.58□□□□□ -1.04
SCG3-202ENST00000542355 YTHDF2Q9Y5A9 579 aaKnown RBP8.58□□□□□ -1.04
SCG3-202ENST00000542355 NUPL2O15504 423 aaKnown RBP8.58□□□□□ -1.04
SCG3-202ENST00000542355 TRGV3P03979 118 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 SNRPCP09234 159 aaKnown RBP8.58□□□□□ -1.04
SCG3-202ENST00000542355 PYYP10082 97 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 GPR183P32249 361 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 SRP14P37108 136 aaKnown RBP8.58□□□□□ -1.04
SCG3-202ENST00000542355 YPEL3P61236 119 aaPredicted RBP8.58□□□□□ -1.04
SCG3-202ENST00000542355 KRTAP1-1Q07627 177 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 LEMD1Q68G75 181 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 TEX29Q8N6K0 151 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 ZNF491Q8N8L2 437 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 CHRDL1Q9BU40 450 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 OR51M1Q9H341 326 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 YAE1D1Q9NRH1 226 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 TMEM167BQ9NRX6 74 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 HIGD1AQ9Y241 93 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 TEX15Q9BXT5 2789 aa8.58□□□□□ -1.04
SCG3-202ENST00000542355 ITPR2Q14571 2701 aa8.57□□□□□ -1.04
SCG3-202ENST00000542355 FAM74A7A6NL05 159 aa8.57□□□□□ -1.04
SCG3-202ENST00000542355 M0R036 132 aa8.57□□□□□ -1.04
SCG3-202ENST00000542355 CD5LO43866 347 aa8.57□□□□□ -1.04
SCG3-202ENST00000542355 FCGR2BP31994 310 aaPredicted RBP8.57□□□□□ -1.04
SCG3-202ENST00000542355 ATP5G2Q06055 141 aa8.57□□□□□ -1.04
SCG3-202ENST00000542355 CLEC19AQ6UXS0 136 aa8.57□□□□□ -1.04
SCG3-202ENST00000542355 SIGLECL1Q8N7X8 197 aa8.57□□□□□ -1.04
SCG3-202ENST00000542355 EEF1AKMT3Q96AZ1 226 aa8.57□□□□□ -1.04
SCG3-202ENST00000542355 PAXXQ9BUH6 204 aa8.57□□□□□ -1.04
SCG3-202ENST00000542355 MRPL27Q9P0M9 148 aaKnown RBP8.57□□□□□ -1.04
SCG3-202ENST00000542355 CREBBPQ92793 2442 aa8.57□□□□□ -1.04
SCG3-202ENST00000542355 IGHV3-35A0A0C4DH35 117 aa8.56□□□□□ -1.04
SCG3-202ENST00000542355 H3BQ15 152 aa8.56□□□□□ -1.04
SCG3-202ENST00000542355 SCGB2A1O75556 95 aa8.56□□□□□ -1.04
SCG3-202ENST00000542355 ADMP35318 185 aa8.56□□□□□ -1.04
SCG3-202ENST00000542355 TPPP2P59282 170 aa8.56□□□□□ -1.04
SCG3-202ENST00000542355 UBE2L3P68036 154 aaKnown RBP8.56□□□□□ -1.04
SCG3-202ENST00000542355 DGAT2L7PQ6IED9 249 aa8.56□□□□□ -1.04
SCG3-202ENST00000542355 RPUSD4Q96CM3 377 aaKnown RBP8.56□□□□□ -1.04
SCG3-202ENST00000542355 SLC25A39Q9BZJ4 359 aaPredicted RBP8.56□□□□□ -1.04
SCG3-202ENST00000542355 AP5S1Q9NUS5 200 aa8.56□□□□□ -1.04
SCG3-202ENST00000542355 FASNP49327 2511 aaKnown RBP8.56□□□□□ -1.04
SCG3-202ENST00000542355 TRBV7-1A0A0A6YYK4 115 aa8.56□□□□□ -1.04
SCG3-202ENST00000542355 WI2-2373I1.2A0A1W2PRP0 233 aa8.56□□□□□ -1.04
SCG3-202ENST00000542355 PRSS29PA6NIE9 313 aa8.56□□□□□ -1.04
SCG3-202ENST00000542355 ZNF727A8MUV8 499 aa8.56□□□□□ -1.04
SCG3-202ENST00000542355 TMEM250H0YL14 139 aa8.56□□□□□ -1.04
SCG3-202ENST00000542355 PDE6DO43924 150 aa8.56□□□□□ -1.04
SCG3-202ENST00000542355 NPPCP23582 126 aa8.56□□□□□ -1.04
SCG3-202ENST00000542355 USF2Q15853 346 aaPredicted RBP8.56□□□□□ -1.04
SCG3-202ENST00000542355 ZNF329Q86UD4 541 aa8.56□□□□□ -1.04
SCG3-202ENST00000542355 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.56□□□□□ -1.04
SCG3-202ENST00000542355 NIPSNAP3BQ9BS92 247 aa8.56□□□□□ -1.04
SCG3-202ENST00000542355 KLK15Q9H2R5 256 aa8.56□□□□□ -1.04
SCG3-202ENST00000542355 GNB4Q9HAV0 340 aa8.56□□□□□ -1.04
SCG3-202ENST00000542355 ITPR3Q14573 2671 aa8.56□□□□□ -1.04
SCG3-202ENST00000542355 HECTD1Q9ULT8 2610 aa8.55□□□□□ -1.04
SCG3-202ENST00000542355 A0A087WWL8 130 aa8.55□□□□□ -1.04
SCG3-202ENST00000542355 FAM223BA6NKX1 122 aa8.55□□□□□ -1.04
SCG3-202ENST00000542355 AKR1C3P42330 323 aa8.55□□□□□ -1.04
SCG3-202ENST00000542355 AWAT1Q58HT5 328 aa8.55□□□□□ -1.04
SCG3-202ENST00000542355 FAM223AQ8IWN6 122 aa8.55□□□□□ -1.04
SCG3-202ENST00000542355 STXBP6Q8NFX7 210 aa8.55□□□□□ -1.04
SCG3-202ENST00000542355 TXNDC17Q9BRA2 123 aa8.55□□□□□ -1.04
SCG3-202ENST00000542355 LCNL1Q6ZST4 164 aa8.55□□□□□ -1.04
SCG3-202ENST00000542355 FXYD5Q96DB9 178 aa8.55□□□□□ -1.04
SCG3-202ENST00000542355 PRSS22Q9GZN4 317 aa8.55□□□□□ -1.04
SCG3-202ENST00000542355 PARLQ9H300 379 aa8.55□□□□□ -1.04
SCG3-202ENST00000542355 GAR1Q9NY12 217 aaKnown RBP8.55□□□□□ -1.04
SCG3-202ENST00000542355 IGHV3OR16-8A0A075B7F1 116 aa8.54□□□□□ -1.04
SCG3-202ENST00000542355 H3BUA1 57 aa8.54□□□□□ -1.04
SCG3-202ENST00000542355 NDUFB4O95168 129 aa8.54□□□□□ -1.04
SCG3-202ENST00000542355 TMEM88Q6PEY1 159 aa8.54□□□□□ -1.04
SCG3-202ENST00000542355 WFDC3Q8IUB2 231 aa8.54□□□□□ -1.04
SCG3-202ENST00000542355 BLNKQ8WV28 456 aa8.54□□□□□ -1.04
SCG3-202ENST00000542355 TVP23CQ96ET8 276 aa8.54□□□□□ -1.04
SCG3-202ENST00000542355 SMIM7Q9BQ49 75 aa8.54□□□□□ -1.04
SCG3-202ENST00000542355 NPFFR1Q9GZQ6 430 aa8.54□□□□□ -1.04
SCG3-202ENST00000542355 RPS10P5Q9NQ39 176 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms