RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 TMEM186Q96B77 213 aa11.83□□□□□ -0.52
DDX55-209ENST00000542286 SSBP3Q9BWW4 388 aaPredicted RBP11.83□□□□□ -0.52
DDX55-209ENST00000542286 FBXL15Q9H469 300 aa11.83□□□□□ -0.52
DDX55-209ENST00000542286 CDC42EP3Q9UKI2 254 aa11.83□□□□□ -0.52
DDX55-209ENST00000542286 S4R3C0 116 aa11.83□□□□□ -0.52
DDX55-209ENST00000542286 CRYBG3Q68DQ2 2970 aa11.83□□□□□ -0.52
DDX55-209ENST00000542286 TRAV30A0A087WSZ9 112 aa11.83□□□□□ -0.52
DDX55-209ENST00000542286 BMPR1BO00238 502 aa11.83□□□□□ -0.52
DDX55-209ENST00000542286 GNG4P50150 75 aa11.83□□□□□ -0.52
DDX55-209ENST00000542286 SMIM15Q7Z3B0 74 aa11.83□□□□□ -0.52
DDX55-209ENST00000542286 PNKDQ8N490 385 aa11.83□□□□□ -0.52
DDX55-209ENST00000542286 KIR3DL3Q8N743 410 aa11.83□□□□□ -0.52
DDX55-209ENST00000542286 OR4F17Q8NGA8 305 aa11.83□□□□□ -0.52
DDX55-209ENST00000542286 VKORC1Q9BQB6 163 aa11.83□□□□□ -0.52
DDX55-209ENST00000542286 PSMB11A5LHX3 300 aa11.82□□□□□ -0.52
DDX55-209ENST00000542286 RPL19P84098 196 aaKnown RBP11.82□□□□□ -0.52
DDX55-209ENST00000542286 PDPNQ86YL7 162 aa11.82□□□□□ -0.52
DDX55-209ENST00000542286 FAM168AQ92567 244 aa11.82□□□□□ -0.52
DDX55-209ENST00000542286 ONECUT1Q9UBC0 465 aa11.82□□□□□ -0.52
DDX55-209ENST00000542286 CSMD2Q7Z408 3487 aa11.82□□□□□ -0.52
DDX55-209ENST00000542286 VSTM5A8MXK1 200 aa11.82□□□□□ -0.52
DDX55-209ENST00000542286 C9JCJ5 164 aa11.82□□□□□ -0.52
DDX55-209ENST00000542286 COX7A2P2O60397 106 aa11.82□□□□□ -0.52
DDX55-209ENST00000542286 TOX4O94842 621 aa11.82□□□□□ -0.52
DDX55-209ENST00000542286 C8orf88P0DMB2 117 aa11.82□□□□□ -0.52
DDX55-209ENST00000542286 RBPJQ06330 500 aa11.82□□□□□ -0.52
DDX55-209ENST00000542286 KLRD1Q13241 179 aa11.82□□□□□ -0.52
DDX55-209ENST00000542286 PMCHL1Q16048 86 aa11.82□□□□□ -0.52
DDX55-209ENST00000542286 ZNF841Q6ZN19 808 aa11.82□□□□□ -0.52
DDX55-209ENST00000542286 NGBQ9NPG2 151 aa11.82□□□□□ -0.52
DDX55-209ENST00000542286 CELSR2Q9HCU4 2923 aa11.82□□□□□ -0.52
DDX55-209ENST00000542286 MT-CO2P00403 227 aa11.81□□□□□ -0.52
DDX55-209ENST00000542286 OR1B1Q8NGR6 318 aa11.81□□□□□ -0.52
DDX55-209ENST00000542286 SERTAD4Q9NUC0 356 aa11.81□□□□□ -0.52
DDX55-209ENST00000542286 HILPDAQ9Y5L2 63 aa11.81□□□□□ -0.52
DDX55-209ENST00000542286 TRAV9-2A0A087WT02 112 aa11.81□□□□□ -0.52
DDX55-209ENST00000542286 ARF6P62330 175 aa11.81□□□□□ -0.52
DDX55-209ENST00000542286 MRPL54Q6P161 138 aaKnown RBP11.81□□□□□ -0.52
DDX55-209ENST00000542286 Q71RC1 249 aaPredicted RBP11.81□□□□□ -0.52
DDX55-209ENST00000542286 INSIG2Q9Y5U4 225 aa11.81□□□□□ -0.52
DDX55-209ENST00000542286 LY96Q9Y6Y9 160 aa11.81□□□□□ -0.52
DDX55-209ENST00000542286 PPIAL4CA0A0B4J2A2 164 aa11.8□□□□□ -0.52
DDX55-209ENST00000542286 B9A039 149 aa11.8□□□□□ -0.52
DDX55-209ENST00000542286 PPIAL4GP0DN37 164 aa11.8□□□□□ -0.52
DDX55-209ENST00000542286 IGLL1P15814 213 aa11.8□□□□□ -0.52
DDX55-209ENST00000542286 S100A7P31151 101 aa11.8□□□□□ -0.52
DDX55-209ENST00000542286 ZNF672Q499Z4 452 aaPredicted RBP11.8□□□□□ -0.52
DDX55-209ENST00000542286 PRR27Q6MZM9 219 aa11.8□□□□□ -0.52
DDX55-209ENST00000542286 ASCL2Q99929 193 aa11.8□□□□□ -0.52
DDX55-209ENST00000542286 CST9LQ9H4G1 147 aa11.8□□□□□ -0.52
DDX55-209ENST00000542286 CFAP46Q8IYW2 2715 aa11.8□□□□□ -0.52
DDX55-209ENST00000542286 IGLV2-8P01709 118 aa11.8□□□□□ -0.52
DDX55-209ENST00000542286 VMA21Q3ZAQ7 101 aa11.8□□□□□ -0.52
DDX55-209ENST00000542286 Q56UQ5 140 aa11.8□□□□□ -0.52
DDX55-209ENST00000542286 C10orf113Q5VZT2 155 aa11.8□□□□□ -0.52
DDX55-209ENST00000542286 LINC00305Q7Z4B0 112 aa11.8□□□□□ -0.52
DDX55-209ENST00000542286 C11orf52Q96A22 123 aa11.8□□□□□ -0.52
DDX55-209ENST00000542286 KAAG1Q9UBP8 84 aa11.8□□□□□ -0.52
DDX55-209ENST00000542286 IGHV1-3A0A0C4DH29 117 aa11.79□□□□□ -0.52
DDX55-209ENST00000542286 OCIAD2Q56VL3 154 aa11.79□□□□□ -0.52
DDX55-209ENST00000542286 NUDT10Q8NFP7 164 aa11.79□□□□□ -0.52
DDX55-209ENST00000542286 TMEM167BQ9NRX6 74 aa11.79□□□□□ -0.52
DDX55-209ENST00000542286 FLNCQ14315 2725 aa11.79□□□□□ -0.52
DDX55-209ENST00000542286 TMEM30BQ3MIR4 351 aa11.79□□□□□ -0.52
DDX55-209ENST00000542286 NDUFS7O75251 213 aa11.79□□□□□ -0.52
DDX55-209ENST00000542286 IGLV1-47P01700 117 aa11.79□□□□□ -0.52
DDX55-209ENST00000542286 APCSP02743 223 aa11.79□□□□□ -0.52
DDX55-209ENST00000542286 AMY1AP04745 511 aa11.79□□□□□ -0.52
DDX55-209ENST00000542286 ADORA2A-AS1P86434 159 aa11.79□□□□□ -0.52
DDX55-209ENST00000542286 COX19Q49B96 90 aa11.79□□□□□ -0.52
DDX55-209ENST00000542286 KLF17Q5JT82 389 aaPredicted RBP11.79□□□□□ -0.52
DDX55-209ENST00000542286 LINC00311Q8N616 119 aa11.79□□□□□ -0.52
DDX55-209ENST00000542286 VSTM2AQ8TAG5 236 aa11.79□□□□□ -0.52
DDX55-209ENST00000542286 PAXXQ9BUH6 204 aa11.79□□□□□ -0.52
DDX55-209ENST00000542286 TCRBV4S1A1TA0A5B7 111 aa11.78□□□□□ -0.52
DDX55-209ENST00000542286 BUB1B-PAK6H3BSN5 160 aa11.78□□□□□ -0.52
DDX55-209ENST00000542286 HLA-DQA1P01909 254 aa11.78□□□□□ -0.52
DDX55-209ENST00000542286 PSG1P11464 419 aa11.78□□□□□ -0.52
DDX55-209ENST00000542286 RHOGP84095 191 aa11.78□□□□□ -0.52
DDX55-209ENST00000542286 TNFRSF19Q9NS68 423 aa11.78□□□□□ -0.52
DDX55-209ENST00000542286 RPL27AP46776 148 aaKnown RBP11.78□□□□□ -0.52
DDX55-209ENST00000542286 EBLN2Q6P2I7 272 aa11.78□□□□□ -0.52
DDX55-209ENST00000542286 TP73-AS1Q9UF72 201 aa11.78□□□□□ -0.52
DDX55-209ENST00000542286 SIGLEC9Q9Y336 463 aa11.78□□□□□ -0.52
DDX55-209ENST00000542286 FNDC10F2Z333 226 aa11.77□□□□□ -0.53
DDX55-209ENST00000542286 ISLRO14498 428 aa11.77□□□□□ -0.53
DDX55-209ENST00000542286 TAS2R45P59539 299 aa11.77□□□□□ -0.53
DDX55-209ENST00000542286 PLGLAQ15195 96 aa11.77□□□□□ -0.53
DDX55-209ENST00000542286 MPV17L2Q567V2 206 aa11.77□□□□□ -0.53
DDX55-209ENST00000542286 ZNF596Q8TC21 504 aa11.77□□□□□ -0.53
DDX55-209ENST00000542286 C18orf32Q8TCD1 76 aa11.77□□□□□ -0.53
DDX55-209ENST00000542286 PKD1L2Q7Z442 2459 aa11.77□□□□□ -0.53
DDX55-209ENST00000542286 FAM181BA6NEQ2 426 aa11.77□□□□□ -0.53
DDX55-209ENST00000542286 CORTO00230 105 aa11.77□□□□□ -0.53
DDX55-209ENST00000542286 HSBP1O75506 76 aa11.77□□□□□ -0.53
DDX55-209ENST00000542286 FSTL3O95633 263 aa11.77□□□□□ -0.53
DDX55-209ENST00000542286 CA7P43166 264 aa11.77□□□□□ -0.53
DDX55-209ENST00000542286 CACNG8Q8WXS5 425 aa11.77□□□□□ -0.53
DDX55-209ENST00000542286 RPEQ96AT9 228 aa11.77□□□□□ -0.53
DDX55-209ENST00000542286 CSTL1Q9H114 145 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms