RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-210	ENST00000541488	DYNAP	Q8N1N2	210 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	TMEM161B	Q8NDZ6	487 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	OR1L8	Q8NGR8	309 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	VCX3B	Q9H321	246 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	MAP1LC3A	Q9H492	121 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	HRASLS	Q9HDD0	168 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	NKIRAS1	Q9NYS0	192 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	RSL24D1	Q9UHA3	163 aa	Known RBP	0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	PRELID1	Q9Y255	219 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	C15orf41	Q9Y2V0	281 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	ATP6V1D	Q9Y5K8	247 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	CCDC88C	Q9P219	2028 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	KIAA2026	Q5HYC2	2103 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	DNAH7	Q8WXX0	4024 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	AKAP6	Q13023	2319 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	KNL1	Q8NG31	2342 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	TRAV7	A0A075B6U4	112 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	IGHV1-18	A0A0C4DH31	117 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	OR4C45	A6NMZ5	311 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488		H7C2G1	150 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	C19orf84	I3L1E1	186 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	ANG	P03950	147 aa	Known RBP	0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	MSMB	P08118	114 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	LGALS1	P09382	135 aa	Known RBP	0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	ZNF705D	P0CH99	300 aa	Predicted RBP	0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	ZNF705B	P0CI00	300 aa	Predicted RBP	0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	COX5B	P10606	129 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	UCHL3	P15374	230 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	CCR2	P41597	374 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	HAAO	P46952	286 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	EVX1	P49640	407 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	SLC38A11	Q08AI6	406 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	C9orf64	Q5T6V5	341 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	ZNF705A	Q6ZN79	300 aa	Predicted RBP	0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	HIST2H3A	Q71DI3	136 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	TMEM156	Q8N614	296 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	OR51T1	Q8NGJ9	327 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	OR2T27	Q8NH04	317 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	SGMS2	Q8NHU3	365 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	ROPN1L	Q96C74	230 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	MRPL32	Q9BYC8	188 aa	Known RBP	0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	TTTY13	Q9BZ97	58 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	LRTM1	Q9HBL6	345 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	GPR84	Q9NQS5	396 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	FGFR1OP2	Q9NVK5	253 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	C3orf18	Q9UK00	162 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	ANAPC10	Q9UM13	185 aa		0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	0.78	□□□□□ -2.28
PRKDC-210	ENST00000541488	MYO5A	Q9Y4I1	1855 aa	Known RBP	0.78	□□□□□ -2.29
PRKDC-210	ENST00000541488	MYH7	P12883	1935 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	NCOA6	Q14686	2063 aa	Predicted RBP	0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	HMCN2	Q8NDA2	5059 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	BAZ2B	Q9UIF8	2168 aa	Known RBP	0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	STAB2	Q8WWQ8	2551 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	HUWE1	Q7Z6Z7	4374 aa	Known RBP	0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488		A0A1B0GV50	99 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	HMSD	A8MTL9	139 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488		A8MUN3	132 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	LRRN3	E7EW58	273 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488		M0QZ92	97 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	CXCR6	O00574	342 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	PGLYRP1	O75594	196 aa	Predicted RBP	0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	DEXI	O95424	95 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	RPL12	P30050	165 aa	Known RBP	0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	AKR1C3	P42330	323 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	RAB14	P61106	215 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	MAGOH	P61326	146 aa	Known RBP	0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	RPL30	P62888	115 aa	Known RBP	0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	EMX1	Q04741	257 aa	Predicted RBP	0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	FABP9	Q0Z7S8	132 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	KRTAP20-1	Q3LI63	56 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	ACSM3	Q53FZ2	586 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	CLVS2	Q5SYC1	327 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	C1orf194	Q5T5A4	169 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	ZNF550	Q7Z398	422 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	COMMD7	Q86VX2	200 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	UMODL1-AS1	Q8N2C9	162 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	TMEM86A	Q8N2M4	240 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	RPP25L	Q8N5L8	163 aa	Known RBP	0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	TBC1D19	Q8N5T2	526 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	MBD3L1	Q8WWY6	194 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	IMMP2L	Q96T52	175 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	CHST6	Q9GZX3	395 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	CST9L	Q9H4G1	147 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	RBM7	Q9Y580	266 aa	Known RBP	0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	HEATR5A	Q86XA9	2040 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	FAT2	Q9NYQ8	4349 aa		0.77	□□□□□ -2.29
PRKDC-210	ENST00000541488	HEATR5B	Q9P2D3	2071 aa		0.76	□□□□□ -2.29
PRKDC-210	ENST00000541488	MYCBP2	O75592	4640 aa		0.76	□□□□□ -2.29
PRKDC-210	ENST00000541488	TRAV38-1	A0A0B4J264	116 aa		0.76	□□□□□ -2.29
PRKDC-210	ENST00000541488	OR51F1	A6NGY5	319 aa		0.76	□□□□□ -2.29
PRKDC-210	ENST00000541488		H0Y980	276 aa		0.76	□□□□□ -2.29
PRKDC-210	ENST00000541488	LST1	O00453	97 aa		0.76	□□□□□ -2.29
PRKDC-210	ENST00000541488	ACOX3	O15254	700 aa		0.76	□□□□□ -2.29
PRKDC-210	ENST00000541488	PLA2G10	O15496	165 aa		0.76	□□□□□ -2.29
PRKDC-210	ENST00000541488	ZNF737	O75373	536 aa		0.76	□□□□□ -2.29
PRKDC-210	ENST00000541488	FGF6	P10767	208 aa		0.76	□□□□□ -2.29
PRKDC-210	ENST00000541488	CCL1	P22362	96 aa		0.76	□□□□□ -2.29
PRKDC-210	ENST00000541488	NFYA	P23511	347 aa	Predicted RBP	0.76	□□□□□ -2.29
PRKDC-210	ENST00000541488	MSN	P26038	577 aa	Known RBP	0.76	□□□□□ -2.29

Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms