RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 EWSR1Q01844 656 aaKnown RBP eCLIP9.66□□□□□ -0.86
PRKDC-206ENST00000536429 PSMG4Q5JS54 123 aa9.66□□□□□ -0.86
PRKDC-206ENST00000536429 RNF183Q96D59 192 aa9.66□□□□□ -0.86
PRKDC-206ENST00000536429 C2orf50Q96LR7 162 aa9.66□□□□□ -0.86
PRKDC-206ENST00000536429 CSTL1Q9H114 145 aa9.66□□□□□ -0.86
PRKDC-206ENST00000536429 NRN1Q9NPD7 142 aa9.66□□□□□ -0.86
PRKDC-206ENST00000536429 ALMS1Q8TCU4 4167 aa9.66□□□□□ -0.86
PRKDC-206ENST00000536429 SIX6O95475 246 aa9.65□□□□□ -0.86
PRKDC-206ENST00000536429 GIG44P09565 113 aaPredicted RBP9.65□□□□□ -0.86
PRKDC-206ENST00000536429 ORM2P19652 201 aa9.65□□□□□ -0.86
PRKDC-206ENST00000536429 DEFB1P60022 68 aa9.65□□□□□ -0.86
PRKDC-206ENST00000536429 CYP2G1PQ6ZSU1 146 aa9.65□□□□□ -0.86
PRKDC-206ENST00000536429 C17orf77Q96MU5 243 aa9.65□□□□□ -0.86
PRKDC-206ENST00000536429 DOK5Q9P104 306 aa9.65□□□□□ -0.86
PRKDC-206ENST00000536429 TP53TG1Q9Y2A0 90 aa9.65□□□□□ -0.86
PRKDC-206ENST00000536429 TENM2Q9NT68 2774 aa9.65□□□□□ -0.86
PRKDC-206ENST00000536429 FAM24AA6NFZ4 105 aa9.64□□□□□ -0.87
PRKDC-206ENST00000536429 INMT-MINDY4F8WBC2 141 aa9.64□□□□□ -0.87
PRKDC-206ENST00000536429 L7N2F9 121 aa9.64□□□□□ -0.87
PRKDC-206ENST00000536429 BCAP31P51572 246 aa9.64□□□□□ -0.87
PRKDC-206ENST00000536429 AP2S1P53680 142 aaPredicted RBP9.64□□□□□ -0.87
PRKDC-206ENST00000536429 S100A10P60903 97 aa9.64□□□□□ -0.87
PRKDC-206ENST00000536429 VAMP2P63027 116 aa9.64□□□□□ -0.87
PRKDC-206ENST00000536429 SLC38A11Q08AI6 406 aa9.64□□□□□ -0.87
PRKDC-206ENST00000536429 RAB32Q13637 225 aa9.64□□□□□ -0.87
PRKDC-206ENST00000536429 ACTL10Q5JWF8 245 aa9.64□□□□□ -0.87
PRKDC-206ENST00000536429 TRPT1Q86TN4 253 aaKnown RBP9.64□□□□□ -0.87
PRKDC-206ENST00000536429 STHQ8IWL8 128 aa9.64□□□□□ -0.87
PRKDC-206ENST00000536429 BPIFCQ8NFQ6 507 aa9.64□□□□□ -0.87
PRKDC-206ENST00000536429 OR10P1Q8NGE3 313 aa9.64□□□□□ -0.87
PRKDC-206ENST00000536429 OR1B1Q8NGR6 318 aa9.64□□□□□ -0.87
PRKDC-206ENST00000536429 PPP1R14BQ96C90 147 aa9.64□□□□□ -0.87
PRKDC-206ENST00000536429 SLC25A32Q9H2D1 315 aa9.64□□□□□ -0.87
PRKDC-206ENST00000536429 AGRNO00468 2067 aa9.63□□□□□ -0.87
PRKDC-206ENST00000536429 A0A0J9YWU9 116 aa9.63□□□□□ -0.87
PRKDC-206ENST00000536429 ZNF98A6NK75 572 aa9.63□□□□□ -0.87
PRKDC-206ENST00000536429 SOCS3O14543 225 aa9.63□□□□□ -0.87
PRKDC-206ENST00000536429 GOSR2O14653 212 aa9.63□□□□□ -0.87
PRKDC-206ENST00000536429 CST7O76096 145 aa9.63□□□□□ -0.87
PRKDC-206ENST00000536429 CA1P00915 261 aaPredicted RBP9.63□□□□□ -0.87
PRKDC-206ENST00000536429 C4BPBP20851 252 aa9.63□□□□□ -0.87
PRKDC-206ENST00000536429 NUP62P37198 522 aaPredicted RBP9.63□□□□□ -0.87
PRKDC-206ENST00000536429 CAV2P51636 162 aa9.63□□□□□ -0.87
PRKDC-206ENST00000536429 C1orf194Q5T5A4 169 aa9.63□□□□□ -0.87
PRKDC-206ENST00000536429 OR8I2Q8N0Y5 310 aa9.63□□□□□ -0.87
PRKDC-206ENST00000536429 MARVELD1Q9BSK0 173 aa9.63□□□□□ -0.87
PRKDC-206ENST00000536429 SCRT1Q9BWW7 348 aa9.63□□□□□ -0.87
PRKDC-206ENST00000536429 SLC25A22Q9H936 323 aa9.63□□□□□ -0.87
PRKDC-206ENST00000536429 NPVFQ9HCQ7 196 aa9.63□□□□□ -0.87
PRKDC-206ENST00000536429 MGAT4CQ9UBM8 478 aa9.63□□□□□ -0.87
PRKDC-206ENST00000536429 IGSF23A1L1A6 192 aa9.62□□□□□ -0.87
PRKDC-206ENST00000536429 FNDC10F2Z333 226 aa9.62□□□□□ -0.87
PRKDC-206ENST00000536429 DEDDO75618 318 aa9.62□□□□□ -0.87
PRKDC-206ENST00000536429 CFDP00746 253 aaPredicted RBP9.62□□□□□ -0.87
PRKDC-206ENST00000536429 LINC00869P0C866 280 aa9.62□□□□□ -0.87
PRKDC-206ENST00000536429 GDF5OSQ5U4N7 250 aa9.62□□□□□ -0.87
PRKDC-206ENST00000536429 TMEM217Q8N7C4 229 aa9.62□□□□□ -0.87
PRKDC-206ENST00000536429 MGST2Q99735 147 aa9.62□□□□□ -0.87
PRKDC-206ENST00000536429 TMEM147Q9BVK8 224 aa9.62□□□□□ -0.87
PRKDC-206ENST00000536429 GPN1Q9HCN4 374 aaPredicted RBP9.62□□□□□ -0.87
PRKDC-206ENST00000536429 PFDN2Q9UHV9 154 aa9.62□□□□□ -0.87
PRKDC-206ENST00000536429 H3BRN7 92 aa9.61□□□□□ -0.87
PRKDC-206ENST00000536429 SNRPD3P62318 126 aaKnown RBP9.61□□□□□ -0.87
PRKDC-206ENST00000536429 TEPPQ6URK8 271 aa9.61□□□□□ -0.87
PRKDC-206ENST00000536429 PATE2Q6UY27 113 aa9.61□□□□□ -0.87
PRKDC-206ENST00000536429 C20orf173Q96LM9 149 aa9.61□□□□□ -0.87
PRKDC-206ENST00000536429 LINC00052Q96N35 136 aa9.61□□□□□ -0.87
PRKDC-206ENST00000536429 UHRF2Q96PU4 802 aa9.61□□□□□ -0.87
PRKDC-206ENST00000536429 GGACTQ9BVM4 153 aa9.61□□□□□ -0.87
PRKDC-206ENST00000536429 SLC25A39Q9BZJ4 359 aaPredicted RBP9.61□□□□□ -0.87
PRKDC-206ENST00000536429 LYRM2Q9NU23 88 aaPredicted RBP9.61□□□□□ -0.87
PRKDC-206ENST00000536429 FBXL17Q9UF56 701 aa9.61□□□□□ -0.87
PRKDC-206ENST00000536429 SLC45A2Q9UMX9 530 aa9.61□□□□□ -0.87
PRKDC-206ENST00000536429 H0YIZ8 118 aa9.6□□□□□ -0.87
PRKDC-206ENST00000536429 AGPAT2O15120 278 aa9.6□□□□□ -0.87
PRKDC-206ENST00000536429 PRAF2O60831 178 aa9.6□□□□□ -0.87
PRKDC-206ENST00000536429 HYPMO75409 117 aa9.6□□□□□ -0.87
PRKDC-206ENST00000536429 DEFA1P59665 94 aa9.6□□□□□ -0.87
PRKDC-206ENST00000536429 DEFA3P59666 94 aa9.6□□□□□ -0.87
PRKDC-206ENST00000536429 PLP1P60201 277 aa9.6□□□□□ -0.87
PRKDC-206ENST00000536429 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.6□□□□□ -0.87
PRKDC-206ENST00000536429 TMEM252Q8N6L7 170 aa9.6□□□□□ -0.87
PRKDC-206ENST00000536429 SHANK2-AS3Q9BTD1 123 aa9.6□□□□□ -0.87
PRKDC-206ENST00000536429 RSG1Q9BU20 258 aa9.6□□□□□ -0.87
PRKDC-206ENST00000536429 ARL6Q9H0F7 186 aa9.6□□□□□ -0.87
PRKDC-206ENST00000536429 SEPSECSQ9HD40 501 aaKnown RBP9.6□□□□□ -0.87
PRKDC-206ENST00000536429 CLEC5AQ9NY25 188 aa9.6□□□□□ -0.87
PRKDC-206ENST00000536429 HIGD1AQ9Y241 93 aa9.6□□□□□ -0.87
PRKDC-206ENST00000536429 H3BMM0 161 aa9.59□□□□□ -0.87
PRKDC-206ENST00000536429 OR5G3P0C626 314 aa9.59□□□□□ -0.87
PRKDC-206ENST00000536429 PVALBP20472 110 aaPredicted RBP9.59□□□□□ -0.87
PRKDC-206ENST00000536429 H2BFSP57053 126 aa9.59□□□□□ -0.87
PRKDC-206ENST00000536429 SELENOTP62341 195 aa9.59□□□□□ -0.87
PRKDC-206ENST00000536429 LRRC37A5PQ49AS3 106 aa9.59□□□□□ -0.87
PRKDC-206ENST00000536429 IGFL4Q6B9Z1 124 aa9.59□□□□□ -0.87
PRKDC-206ENST00000536429 OR11H2Q8NH07 326 aa9.59□□□□□ -0.87
PRKDC-206ENST00000536429 IL17DQ8TAD2 202 aa9.59□□□□□ -0.87
PRKDC-206ENST00000536429 GATAD1Q8WUU5 269 aa9.59□□□□□ -0.87
PRKDC-206ENST00000536429 RARRES2Q99969 163 aa9.59□□□□□ -0.87
PRKDC-206ENST00000536429 OR5AC2Q9NZP5 309 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms