RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 FAM223BA6NKX1 122 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 SLC25A20O43772 301 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 IGKV2D-40P01614 121 aaPredicted RBP5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 HGFACQ04756 655 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 FAM223AQ8IWN6 122 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 SCRT1Q9BWW7 348 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 SLC25A39Q9BZJ4 359 aaPredicted RBP5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 DOCK10Q96BY6 2186 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 C5orf63A6NC05 138 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 SRRM4A7MD48 611 aaKnown RBP5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 ORMDL2Q53FV1 153 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 COQ2Q96H96 371 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 TRGV9Q99603 122 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 NXT2Q9NPJ8 142 aaKnown RBP5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 PEF1Q9UBV8 284 aaKnown RBP5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 CARHSP1Q9Y2V2 147 aaKnown RBP5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 HEATR1Q9H583 2144 aaKnown RBP5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 BDP1A6H8Y1 2624 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 TRAV12-3A0A0B4J271 114 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 FREM3P0C091 2139 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 SSBP4Q9BWG4 385 aaPredicted RBP5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 GGTLC1Q9BX51 225 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 DEFB130BP0DP73 79 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 DEFB130AP0DP74 79 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 RPL36AP83881 106 aaKnown RBP5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 IFITM2Q01629 132 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 Q6P435 159 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 TMEM190Q8WZ59 177 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 RPL36ALQ969Q0 106 aaKnown RBP5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 RHPN1-AS1Q9BWJ2 59 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 TRAV3A0A0B4J244 114 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 H0YIZ8 118 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 GATA4P43694 442 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 LY6G6FQ5SQ64 297 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 DTX1Q86Y01 620 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 FAM19A2Q8N3H0 131 aa5.22□□□□□ -1.57
UBQLN1-206ENST00000533705 ZFHX2Q9C0A1 2572 aaPredicted RBP5.21□□□□□ -1.57
UBQLN1-206ENST00000533705 A0A087WWC5 75 aa5.21□□□□□ -1.57
UBQLN1-206ENST00000533705 OVOL3O00110 214 aa5.21□□□□□ -1.57
UBQLN1-206ENST00000533705 SNAI2O43623 268 aa5.21□□□□□ -1.57
UBQLN1-206ENST00000533705 APOMO95445 188 aa5.21□□□□□ -1.57
UBQLN1-206ENST00000533705 ZNF138P52744 262 aa5.21□□□□□ -1.57
UBQLN1-206ENST00000533705 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.21□□□□□ -1.589e-7■■■■■ 34.1
UBQLN1-206ENST00000533705 INSP01308 110 aa5.21□□□□□ -1.58
UBQLN1-206ENST00000533705 BTCP35070 178 aa5.21□□□□□ -1.58
UBQLN1-206ENST00000533705 UBE2E1P51965 193 aa5.21□□□□□ -1.58
UBQLN1-206ENST00000533705 LHFPL1Q86WI0 220 aa5.21□□□□□ -1.58
UBQLN1-206ENST00000533705 C11orf68Q9H3H3 251 aaKnown RBP5.21□□□□□ -1.58
UBQLN1-206ENST00000533705 SCN8AQ9UQD0 1980 aa5.21□□□□□ -1.58
UBQLN1-206ENST00000533705 TRBV6-6A0A0A6YYG2 114 aa5.21□□□□□ -1.58
UBQLN1-206ENST00000533705 HBDP02042 147 aa5.21□□□□□ -1.58
UBQLN1-206ENST00000533705 EVI2AP22794 236 aa5.21□□□□□ -1.58
UBQLN1-206ENST00000533705 DDTP30046 118 aa5.21□□□□□ -1.58
UBQLN1-206ENST00000533705 EXOC3-AS1Q8N2X6 119 aa5.21□□□□□ -1.58
UBQLN1-206ENST00000533705 RNF182Q8N6D2 247 aa5.21□□□□□ -1.58
UBQLN1-206ENST00000533705 A0A0U1RRA0 63 aa5.21□□□□□ -1.58
UBQLN1-206ENST00000533705 FOXL2NBQ6ZUU3 175 aa5.21□□□□□ -1.58
UBQLN1-206ENST00000533705 IL17RELQ6ZVW7 336 aa5.21□□□□□ -1.58
UBQLN1-206ENST00000533705 OCC1Q8TAD7 63 aa5.21□□□□□ -1.58
UBQLN1-206ENST00000533705 LINC00477Q96M19 166 aa5.21□□□□□ -1.58
UBQLN1-206ENST00000533705 DAZ1Q9NQZ3 744 aaKnown RBP5.21□□□□□ -1.58
UBQLN1-206ENST00000533705 IGHV1-69DA0A0B4J2H0 117 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 IGHV1-69P01742 117 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 STAG3L3P0CL85 134 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 NYNRINQ9P2P1 1898 aaKnown RBP5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 ARFGEF3Q5TH69 2177 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 LY6G6EA0A0G2JKS1 128 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 LINC00473A8K010 186 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 IGKV1-5P01602 117 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 PRB1P04280 392 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 TMEM86BQ8N661 226 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 TSKUQ8WUA8 353 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 C14orf144Q96I85 54 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 U3KQA8 63 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 PGPEP1LA6NFU8 196 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 DEFB131AP59861 70 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 CKS1BP61024 79 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 ZNF876PQ49A33 203 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 C5orf24Q7Z6I8 188 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 DEFB104AQ8WTQ1 72 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 MBD3L1Q8WWY6 194 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 MUC6Q6W4X9 2439 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 PCNX1Q96RV3 2341 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 THSD7BQ9C0I4 1608 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 LDLRAD4O15165 306 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 CEACAM8P31997 349 aaPredicted RBP5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 PRDM13Q9H4Q3 707 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 COL4A6Q14031 1691 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 FAM208BQ5VWN6 2430 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 SBF1O95248 1867 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 LINC01549A6NIU2 74 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 SPATA31B1PQ5VZV4 182 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 IGFL4Q6B9Z1 124 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 VSIRQ9H7M9 311 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 WFDC1Q9HC57 220 aa5.2□□□□□ -1.58
UBQLN1-206ENST00000533705 TNFSF13O75888 250 aa5.19□□□□□ -1.58
UBQLN1-206ENST00000533705 ST6GALNAC6Q969X2 333 aa5.19□□□□□ -1.58
UBQLN1-206ENST00000533705 REG4Q9BYZ8 158 aa5.19□□□□□ -1.58
UBQLN1-206ENST00000533705 TCRAP04437 139 aa5.19□□□□□ -1.58
UBQLN1-206ENST00000533705 NMSQ5H8A3 153 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms