RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 PRR20CP86479 221 aa10.4□□□□□ -0.74
CD44-224ENST00000526669 PRR20DP86480 221 aa10.4□□□□□ -0.74
CD44-224ENST00000526669 PRR20BP86481 221 aa10.4□□□□□ -0.74
CD44-224ENST00000526669 PRR20AP86496 221 aa10.4□□□□□ -0.74
CD44-224ENST00000526669 GCSAMLQ5JQS6 135 aa10.4□□□□□ -0.74
CD44-224ENST00000526669 FFAR4Q5NUL3 377 aa10.4□□□□□ -0.74
CD44-224ENST00000526669 C9orf66Q5T8R8 295 aa10.4□□□□□ -0.74
CD44-224ENST00000526669 LAMTOR1Q6IAA8 161 aa10.4□□□□□ -0.74
CD44-224ENST00000526669 PARD6GQ9BYG4 376 aaPredicted RBP10.4□□□□□ -0.74
CD44-224ENST00000526669 SH3BGRL3Q9H299 93 aa10.4□□□□□ -0.74
CD44-224ENST00000526669 MLXQ9UH92 298 aa10.4□□□□□ -0.74
CD44-224ENST00000526669 HIGD1AQ9Y241 93 aa10.4□□□□□ -0.74
CD44-224ENST00000526669 COX7A2P2O60397 106 aa10.39□□□□□ -0.75
CD44-224ENST00000526669 HYPMO75409 117 aa10.39□□□□□ -0.75
CD44-224ENST00000526669 CFDP00746 253 aaPredicted RBP10.39□□□□□ -0.75
CD44-224ENST00000526669 CRYBB3P26998 211 aa10.39□□□□□ -0.75
CD44-224ENST00000526669 OXLD1Q5BKU9 147 aa10.39□□□□□ -0.75
CD44-224ENST00000526669 PATE2Q6UY27 113 aa10.39□□□□□ -0.75
CD44-224ENST00000526669 UHRF2Q96PU4 802 aa10.39□□□□□ -0.75
CD44-224ENST00000526669 RHPN1-AS1Q9BWJ2 59 aa10.39□□□□□ -0.75
CD44-224ENST00000526669 MRPL27Q9P0M9 148 aaKnown RBP10.39□□□□□ -0.75
CD44-224ENST00000526669 SMPXQ9UHP9 88 aa10.39□□□□□ -0.75
CD44-224ENST00000526669 AGRNO00468 2067 aa10.38□□□□□ -0.75
CD44-224ENST00000526669 NOTCH1P46531 2555 aa10.38□□□□□ -0.75
CD44-224ENST00000526669 CHEK1O14757 476 aa10.38□□□□□ -0.75
CD44-224ENST00000526669 C8orf88P0DMB2 117 aa10.38□□□□□ -0.75
CD44-224ENST00000526669 PLP1P60201 277 aa10.38□□□□□ -0.75
CD44-224ENST00000526669 LEMD1Q68G75 181 aa10.38□□□□□ -0.75
CD44-224ENST00000526669 Q6ZRG5 221 aa10.38□□□□□ -0.75
CD44-224ENST00000526669 NARS2Q96I59 477 aaKnown RBP10.38□□□□□ -0.75
CD44-224ENST00000526669 MCRIP2Q9BUT9 160 aaKnown RBP10.38□□□□□ -0.75
CD44-224ENST00000526669 SCRT1Q9BWW7 348 aa10.38□□□□□ -0.75
CD44-224ENST00000526669 ARV1Q9H2C2 271 aa10.38□□□□□ -0.75
CD44-224ENST00000526669 SLC25A22Q9H936 323 aa10.38□□□□□ -0.75
CD44-224ENST00000526669 KCNIP2Q9NS61 270 aa10.38□□□□□ -0.75
CD44-224ENST00000526669 BOLA1Q9Y3E2 137 aa10.38□□□□□ -0.75
CD44-224ENST00000526669 IGKV3-7A0A075B6H7 116 aa10.37□□□□□ -0.75
CD44-224ENST00000526669 IZUMO1RA6ND01 250 aa10.37□□□□□ -0.75
CD44-224ENST00000526669 G3V4G9 280 aa10.37□□□□□ -0.75
CD44-224ENST00000526669 H3BRN7 92 aa10.37□□□□□ -0.75
CD44-224ENST00000526669 EIF3GO75821 320 aaKnown RBP eCLIP10.37□□□□□ -0.75
CD44-224ENST00000526669 JTBO76095 146 aa10.37□□□□□ -0.75
CD44-224ENST00000526669 C10orf113Q5VZT2 155 aa10.37□□□□□ -0.75
CD44-224ENST00000526669 TMEM37Q8WXS4 190 aa10.37□□□□□ -0.75
CD44-224ENST00000526669 MARC2Q969Z3 335 aa10.37□□□□□ -0.75
CD44-224ENST00000526669 RNF2Q99496 336 aa10.37□□□□□ -0.75
CD44-224ENST00000526669 SLC25A39Q9BZJ4 359 aaPredicted RBP10.37□□□□□ -0.75
CD44-224ENST00000526669 SLC25A32Q9H2D1 315 aa10.37□□□□□ -0.75
CD44-224ENST00000526669 VSIRQ9H7M9 311 aa10.37□□□□□ -0.75
CD44-224ENST00000526669 TIMM9Q9Y5J7 89 aa10.37□□□□□ -0.75
CD44-224ENST00000526669 U3KQE9 123 aa10.37□□□□□ -0.75
CD44-224ENST00000526669 RAB2AP61019 212 aa10.36□□□□□ -0.75
CD44-224ENST00000526669 DEFB114Q30KQ6 69 aa10.36□□□□□ -0.75
CD44-224ENST00000526669 CD300EQ496F6 205 aaPredicted RBP10.36□□□□□ -0.75
CD44-224ENST00000526669 MORN5Q5VZ52 161 aa10.36□□□□□ -0.75
CD44-224ENST00000526669 SPATA31B1PQ5VZV4 182 aa10.36□□□□□ -0.75
CD44-224ENST00000526669 LINC00305Q7Z4B0 112 aa10.36□□□□□ -0.75
CD44-224ENST00000526669 OR1L4Q8NGR5 311 aa10.36□□□□□ -0.75
CD44-224ENST00000526669 OR2G3Q8NGZ4 309 aa10.36□□□□□ -0.75
CD44-224ENST00000526669 PFDN5Q99471 154 aa10.36□□□□□ -0.75
CD44-224ENST00000526669 DNAJC4Q9NNZ3 241 aa10.36□□□□□ -0.75
CD44-224ENST00000526669 TRAV5A0A0B4J249 113 aa10.35□□□□□ -0.75
CD44-224ENST00000526669 A0A1W2PS18 150 aa10.35□□□□□ -0.75
CD44-224ENST00000526669 ZNF98A6NK75 572 aa10.35□□□□□ -0.75
CD44-224ENST00000526669 BUB3O43684 328 aa10.35□□□□□ -0.75
CD44-224ENST00000526669 IGLV1-51P01701 117 aa10.35□□□□□ -0.75
CD44-224ENST00000526669 PXDC1Q5TGL8 231 aa10.35□□□□□ -0.75
CD44-224ENST00000526669 FAM122CQ6P4D5 195 aa10.35□□□□□ -0.75
CD44-224ENST00000526669 C16orf54Q6UWD8 224 aa10.35□□□□□ -0.75
CD44-224ENST00000526669 TCF24Q7RTU0 167 aa10.35□□□□□ -0.75
CD44-224ENST00000526669 GNPNAT1Q96EK6 184 aaPredicted RBP10.35□□□□□ -0.75
CD44-224ENST00000526669 GRAMD2BQ96HH9 432 aa10.35□□□□□ -0.75
CD44-224ENST00000526669 PSMG3Q9BT73 122 aaPredicted RBP10.35□□□□□ -0.75
CD44-224ENST00000526669 SHANK2-AS3Q9BTD1 123 aa10.35□□□□□ -0.75
CD44-224ENST00000526669 TMEM231Q9H6L2 316 aa10.35□□□□□ -0.75
CD44-224ENST00000526669 SIGLEC8Q9NYZ4 499 aa10.35□□□□□ -0.75
CD44-224ENST00000526669 BMI1P35226 326 aa10.34□□□□□ -0.75
CD44-224ENST00000526669 ACOT6Q3I5F7 207 aaPredicted RBP10.34□□□□□ -0.75
CD44-224ENST00000526669 FAM78BQ5VT40 261 aa10.34□□□□□ -0.75
CD44-224ENST00000526669 MIR17HGQ75NE6 70 aa10.34□□□□□ -0.75
CD44-224ENST00000526669 TMEM61Q8N0U2 210 aa10.34□□□□□ -0.75
CD44-224ENST00000526669 GBGT1Q8N5D6 347 aa10.34□□□□□ -0.75
CD44-224ENST00000526669 GLMPQ8WWB7 406 aa10.34□□□□□ -0.75
CD44-224ENST00000526669 TECRQ9NZ01 308 aaKnown RBP10.34□□□□□ -0.75
CD44-224ENST00000526669 NBEAL1Q6ZS30 2694 aa10.34□□□□□ -0.75
CD44-224ENST00000526669 ELOA3CA0A087WX78 387 aaPredicted RBP10.33□□□□□ -0.76
CD44-224ENST00000526669 TPT1P13693 172 aaKnown RBP10.33□□□□□ -0.76
CD44-224ENST00000526669 TFPI2P48307 235 aa10.33□□□□□ -0.76
CD44-224ENST00000526669 INSL3P51460 131 aa10.33□□□□□ -0.76
CD44-224ENST00000526669 RPL11P62913 178 aaKnown RBP10.33□□□□□ -0.76
CD44-224ENST00000526669 GUCA2BQ16661 112 aa10.33□□□□□ -0.76
CD44-224ENST00000526669 SAMD5Q5TGI4 173 aa10.33□□□□□ -0.76
CD44-224ENST00000526669 SIGLEC15Q6ZMC9 328 aa10.33□□□□□ -0.76
CD44-224ENST00000526669 RBPMS2Q6ZRY4 209 aaKnown RBP10.33□□□□□ -0.76
CD44-224ENST00000526669 SLC51BQ86UW2 128 aa10.33□□□□□ -0.76
CD44-224ENST00000526669 WFDC3Q8IUB2 231 aa10.33□□□□□ -0.76
CD44-224ENST00000526669 OR8I2Q8N0Y5 310 aa10.33□□□□□ -0.76
CD44-224ENST00000526669 STXBP6Q8NFX7 210 aa10.33□□□□□ -0.76
CD44-224ENST00000526669 GATAD1Q8WUU5 269 aa10.33□□□□□ -0.76
CD44-224ENST00000526669 GPR61Q9BZJ8 451 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms