RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 HOGA1Q86XE5 327 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 LGI3Q8N145 548 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 ARRDC1Q8N5I2 433 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 ZNF645Q8N7E2 425 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 ZNF738Q8NE65 137 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 OR11H7Q8NGC8 314 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 TERB2Q8NHR7 220 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 GALMQ96C23 342 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 TM2D1Q9BX74 207 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 SLC25A32Q9H2D1 315 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 TAF9BQ9HBM6 251 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 ZNF230Q9UIE0 474 aaPredicted RBP3.58□□□□□ -1.84
SDCBP-207ENST00000520168 GPR132Q9UNW8 380 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 AGRNO00468 2067 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 A0A087WWL8 130 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 A0A0A6YYD4 124 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 TRBV9A0A0B4J1U6 114 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 A0A0B4J2A0 478 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 MEIS3P1A6NDR6 274 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 OR4C46A6NHA9 309 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 HMSDA8MTL9 139 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 EPM2AB3EWF7 344 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 M0QYG6 137 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 M0R2N4 97 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 MPPED1O15442 326 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 SOCS1O15524 211 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 FCGR3BO75015 233 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 IFNA7P01567 189 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 IFNA17P01571 189 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 APOA2P02652 100 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 SERPINE2P07093 398 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 C8orf88P0DMB2 117 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 CT45A6P0DMU7 189 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 CT45A5P0DMU8 189 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 CT45A7P0DMV0 189 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 MYOD1P15172 320 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 MGMTP16455 207 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 HLA-GP17693 338 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 CXCL3P19876 107 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 PMCHP20382 165 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 SERPINA2P20848 420 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 F2RP25116 425 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 PPP1CCP36873 323 aaKnown RBP3.57□□□□□ -1.84
SDCBP-207ENST00000520168 CMC4P56277 68 aaPredicted RBP3.57□□□□□ -1.84
SDCBP-207ENST00000520168 TMEM50BP56557 158 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 TAS2R31P59538 309 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 TAS2R46P59540 309 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 PKIAP61925 76 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 RHOGP84095 191 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 CYCSP99999 105 aaKnown RBP3.57□□□□□ -1.84
SDCBP-207ENST00000520168 DHODHQ02127 395 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 ICAM4Q14773 271 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 ATP6V1FQ16864 119 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 SLC22A6Q4U2R8 563 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 FAM159AQ6UWV7 190 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 Q6ZR54 194 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 FAM219AQ8IW50 185 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 C9orf62Q8N4C0 152 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 C12orf45Q8N5I9 185 aaPredicted RBP3.57□□□□□ -1.84
SDCBP-207ENST00000520168 BEST4Q8NFU0 473 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 OR2T35Q8NGX2 323 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 OR1L1Q8NH94 360 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 ST8SIA2Q92186 375 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 NARS2Q96I59 477 aaKnown RBP3.57□□□□□ -1.84
SDCBP-207ENST00000520168 C14orf144Q96I85 54 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 ATG101Q9BSB4 218 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 NDUFAF3Q9BU61 184 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 PARP12Q9H0J9 701 aaKnown RBP3.57□□□□□ -1.84
SDCBP-207ENST00000520168 IFI27L2Q9H2X8 130 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 KCNK15Q9H427 330 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 BANF2Q9H503 90 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 C5orf66Q9H5L9 145 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 MRPL27Q9P0M9 148 aaKnown RBP3.57□□□□□ -1.84
SDCBP-207ENST00000520168 SHPKQ9UHJ6 478 aa3.57□□□□□ -1.84
SDCBP-207ENST00000520168 SRRM2Q9UQ35 2752 aaKnown RBP3.56□□□□□ -1.84
SDCBP-207ENST00000520168 A0A0U1RRA0 63 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 FOXI3A8MTJ6 420 aaPredicted RBP3.56□□□□□ -1.84
SDCBP-207ENST00000520168 USP17L23D6RBM5 183 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 PPP5D1E7EU14 171 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 K7ERU9 68 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 SLC17A3O00476 420 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 MFNGO00587 321 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 TGOLN2O43493 480 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 SLC22A5O76082 557 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 MT-CO2P00403 227 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 IGKV1-16P04430 117 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 CD5P06127 495 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 MIFP14174 115 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 ZNF25P17030 456 aaPredicted RBP3.56□□□□□ -1.84
SDCBP-207ENST00000520168 RCC1P18754 421 aaPredicted RBP3.56□□□□□ -1.84
SDCBP-207ENST00000520168 FUT3P21217 361 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 NFYAP23511 347 aaPredicted RBP3.56□□□□□ -1.84
SDCBP-207ENST00000520168 ZBTB25P24278 435 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 HRH1P35367 487 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 ID1P41134 155 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 PJVKQ0ZLH3 352 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 DHRS2Q13268 280 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 ARFRP1Q13795 201 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 GNMTQ14749 295 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 SURF2Q15527 256 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms