RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 MUC7Q8TAX7 377 aa6.98□□□□□ -1.29
HDAC3-215ENST00000519474 TMEM230Q96A57 120 aa6.98□□□□□ -1.29
HDAC3-215ENST00000519474 LINC00052Q96N35 136 aa6.98□□□□□ -1.29
HDAC3-215ENST00000519474 NAA60Q9H7X0 242 aa6.98□□□□□ -1.29
HDAC3-215ENST00000519474 EDA2RQ9HAV5 297 aa6.98□□□□□ -1.29
HDAC3-215ENST00000519474 GPN1Q9HCN4 374 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-215ENST00000519474 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-215ENST00000519474 C14orf166Q9Y224 244 aaKnown RBP6.98□□□□□ -1.29
HDAC3-215ENST00000519474 FBLL1A6NHQ2 334 aaKnown RBP6.97□□□□□ -1.29
HDAC3-215ENST00000519474 C15orf62A8K5M9 175 aa6.97□□□□□ -1.29
HDAC3-215ENST00000519474 NPSP0C0P6 89 aa6.97□□□□□ -1.29
HDAC3-215ENST00000519474 SNCAP37840 140 aa6.97□□□□□ -1.29
HDAC3-215ENST00000519474 TMEM187Q14656 261 aa6.97□□□□□ -1.29
HDAC3-215ENST00000519474 CASC10Q5T4H9 136 aa6.97□□□□□ -1.29
HDAC3-215ENST00000519474 RBPMS2Q6ZRY4 209 aaKnown RBP6.97□□□□□ -1.29
HDAC3-215ENST00000519474 OR52B4Q8NGK2 314 aa6.97□□□□□ -1.29
HDAC3-215ENST00000519474 OR52E5Q8NH55 327 aa6.97□□□□□ -1.29
HDAC3-215ENST00000519474 COQ8AQ8NI60 647 aa6.97□□□□□ -1.29
HDAC3-215ENST00000519474 PINX1Q96BK5 328 aaKnown RBP6.97□□□□□ -1.29
HDAC3-215ENST00000519474 OR10C1Q96KK4 312 aa6.97□□□□□ -1.29
HDAC3-215ENST00000519474 SPATA25Q9BR10 227 aa6.97□□□□□ -1.29
HDAC3-215ENST00000519474 C20orf24Q9BUV8 137 aa6.97□□□□□ -1.29
HDAC3-215ENST00000519474 NKX6-2Q9C056 277 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-215ENST00000519474 ARV1Q9H2C2 271 aa6.97□□□□□ -1.29
HDAC3-215ENST00000519474 FNDC4Q9H6D8 234 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-215ENST00000519474 SRD5A3Q9H8P0 318 aa6.97□□□□□ -1.29
HDAC3-215ENST00000519474 DAZ1Q9NQZ3 744 aaKnown RBP6.97□□□□□ -1.29
HDAC3-215ENST00000519474 GAR1Q9NY12 217 aaKnown RBP6.97□□□□□ -1.29
HDAC3-215ENST00000519474 HUWE1Q7Z6Z7 4374 aaKnown RBP6.96□□□□□ -1.29
HDAC3-215ENST00000519474 C1orf196B1AJZ1 125 aa6.96□□□□□ -1.3
HDAC3-215ENST00000519474 CHEK1O14757 476 aa6.96□□□□□ -1.3
HDAC3-215ENST00000519474 SUB1P53999 127 aaKnown RBP eCLIP6.96□□□□□ -1.3
HDAC3-215ENST00000519474 SUMO1P63165 101 aaKnown RBP6.96□□□□□ -1.3
HDAC3-215ENST00000519474 SUPT4H1P63272 117 aaKnown RBP6.96□□□□□ -1.3
HDAC3-215ENST00000519474 ANKRD55Q3KP44 614 aa6.96□□□□□ -1.3
HDAC3-215ENST00000519474 FAM90A2PQ658T7 463 aa6.96□□□□□ -1.3
HDAC3-215ENST00000519474 LAMTOR1Q6IAA8 161 aa6.96□□□□□ -1.3
HDAC3-215ENST00000519474 FAM219AQ8IW50 185 aa6.96□□□□□ -1.3
HDAC3-215ENST00000519474 SLC35G3Q8N808 338 aa6.96□□□□□ -1.3
HDAC3-215ENST00000519474 DUSP18Q8NEJ0 188 aa6.96□□□□□ -1.3
HDAC3-215ENST00000519474 GALNT14Q96FL9 552 aa6.96□□□□□ -1.3
HDAC3-215ENST00000519474 CCDC32Q9BV29 185 aa6.96□□□□□ -1.3
HDAC3-215ENST00000519474 RHPN1-AS1Q9BWJ2 59 aa6.96□□□□□ -1.3
HDAC3-215ENST00000519474 RETNQ9HD89 108 aa6.96□□□□□ -1.3
HDAC3-215ENST00000519474 PRR13Q9NZ81 148 aa6.96□□□□□ -1.3
HDAC3-215ENST00000519474 MRPL36Q9P0J6 103 aaKnown RBP6.96□□□□□ -1.3
HDAC3-215ENST00000519474 IGHV3-49A0A0A0MS15 119 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 TRAV14DV4A0A0A6YYC5 116 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 IGHV7-4-1A0A0J9YVY3 117 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 GOSR2O14653 212 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 GNG7O60262 68 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 YIF1AO95070 293 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 APOHP02749 345 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-215ENST00000519474 SPP1P10451 314 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 LYL1P12980 280 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 NPBWR1P48145 328 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 SNRPEP62304 92 aaKnown RBP6.95□□□□□ -1.3
HDAC3-215ENST00000519474 RAB31Q13636 194 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 KLF9Q13886 244 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-215ENST00000519474 ZNF79Q15937 498 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 PYDC2Q56P42 97 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 TMEM41BQ5BJD5 291 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 TMEM268Q5VZI3 342 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 TOMM20LQ6UXN7 152 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 SSX7Q7RTT5 188 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 LYZL2Q7Z4W2 148 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 CCDC190Q86UF4 302 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 TMEM116Q8NCL8 245 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 OR11H2Q8NH07 326 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 SCGB3A2Q96PL1 93 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 SPAG8Q99932 426 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-215ENST00000519474 VPS25Q9BRG1 176 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 URGCP-MRPS24S4R325 110 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 V9GYH0 126 aa6.95□□□□□ -1.3
HDAC3-215ENST00000519474 A0A1B0GU03 582 aa6.94□□□□□ -1.3
HDAC3-215ENST00000519474 M0R036 132 aa6.94□□□□□ -1.3
HDAC3-215ENST00000519474 IFNA5P01569 189 aa6.94□□□□□ -1.3
HDAC3-215ENST00000519474 AKR1C4P17516 323 aa6.94□□□□□ -1.3
HDAC3-215ENST00000519474 C2orf83Q53S99 150 aa6.94□□□□□ -1.3
HDAC3-215ENST00000519474 ATRAIDQ6UW56 229 aa6.94□□□□□ -1.3
HDAC3-215ENST00000519474 TMEM144Q7Z5S9 345 aa6.94□□□□□ -1.3
HDAC3-215ENST00000519474 OR4X1Q8NH49 305 aa6.94□□□□□ -1.3
HDAC3-215ENST00000519474 TMEM170AQ8WVE7 144 aa6.94□□□□□ -1.3
HDAC3-215ENST00000519474 IL22RA2Q969J5 263 aa6.94□□□□□ -1.3
HDAC3-215ENST00000519474 ENY2Q9NPA8 101 aa6.94□□□□□ -1.3
HDAC3-215ENST00000519474 CACNG5Q9UF02 275 aa6.94□□□□□ -1.3
HDAC3-215ENST00000519474 IGHV3OR16-13A0A075B7E8 117 aa6.93□□□□□ -1.3
HDAC3-215ENST00000519474 LOC102724200A0A096LPH7 203 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-215ENST00000519474 IGHV3-74A0A0B4J1X5 117 aa6.93□□□□□ -1.3
HDAC3-215ENST00000519474 TRBV7-9A0A0J9YWB2 115 aa6.93□□□□□ -1.3
HDAC3-215ENST00000519474 SMLR1H3BR10 107 aa6.93□□□□□ -1.3
HDAC3-215ENST00000519474 CORTO00230 105 aa6.93□□□□□ -1.3
HDAC3-215ENST00000519474 TCRBP04435 133 aa6.93□□□□□ -1.3
HDAC3-215ENST00000519474 AKR1C3P42330 323 aa6.93□□□□□ -1.3
HDAC3-215ENST00000519474 HERV-K104P63124 156 aa6.93□□□□□ -1.3
HDAC3-215ENST00000519474 DLK1P80370 383 aa6.93□□□□□ -1.3
HDAC3-215ENST00000519474 FCN2Q15485 313 aa6.93□□□□□ -1.3
HDAC3-215ENST00000519474 NMSQ5H8A3 153 aa6.93□□□□□ -1.3
HDAC3-215ENST00000519474 ZFAND6Q6FIF0 208 aa6.93□□□□□ -1.3
HDAC3-215ENST00000519474 TOMM5Q8N4H5 51 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms