RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 GTSCR1Q86UQ5 136 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 RPRMLQ8N4K4 120 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 C1orf64Q8NEQ6 169 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 OR5D14Q8NGL3 314 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 PFN4Q8NHR9 129 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 MUC7Q8TAX7 377 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 NAT14Q8WUY8 206 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 VOPP1Q96AW1 172 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 TMEM191AQ9H0A3 160 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 GOLGA2P5Q9HBQ8 144 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 ASF1BQ9NVP2 202 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 TXNL4BQ9NX01 149 aaKnown RBP2.54□□□□□ -2
RNU4-60P-201ENST00000517239 SCN3BQ9NY72 215 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 ANAPC1Q9H1A4 1944 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 BCORL1Q5H9F3 1711 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 KDM6AO15550 1401 aaPredicted RBP2.53□□□□□ -2
RNU4-60P-201ENST00000517239 PLXNB1O43157 2135 aa2.53□□□□□ -2
RNU4-60P-201ENST00000517239 MYH13Q9UKX3 1938 aa2.53□□□□□ -2
RNU4-60P-201ENST00000517239 TRAV27A0A087WT01 109 aa2.53□□□□□ -2
RNU4-60P-201ENST00000517239 A0A1W2PQD3 144 aa2.53□□□□□ -2
RNU4-60P-201ENST00000517239 C17orf98A8MV24 154 aa2.53□□□□□ -2
RNU4-60P-201ENST00000517239 PANO1I0J062 215 aa2.53□□□□□ -2
RNU4-60P-201ENST00000517239 M0R129 80 aa2.53□□□□□ -2
RNU4-60P-201ENST00000517239 IGHV3-53P01767 116 aa2.53□□□□□ -2
RNU4-60P-201ENST00000517239 SLC25A5P05141 298 aaKnown RBP2.53□□□□□ -2
RNU4-60P-201ENST00000517239 GNG4P50150 75 aa2.53□□□□□ -2
RNU4-60P-201ENST00000517239 FOXA3P55318 350 aaPredicted RBP2.53□□□□□ -2
RNU4-60P-201ENST00000517239 QRFPP83859 136 aa2.53□□□□□ -2
RNU4-60P-201ENST00000517239 ZNF117Q03924 483 aa2.53□□□□□ -2
RNU4-60P-201ENST00000517239 ZNF816Q0VGE8 651 aaPredicted RBP2.53□□□□□ -2
RNU4-60P-201ENST00000517239 C2orf83Q53S99 150 aa2.53□□□□□ -2
RNU4-60P-201ENST00000517239 TEX261Q6UWH6 196 aa2.53□□□□□ -2
RNU4-60P-201ENST00000517239 LCN15Q6UWW0 184 aa2.53□□□□□ -2
RNU4-60P-201ENST00000517239 DPPA3Q6W0C5 159 aa2.53□□□□□ -2
RNU4-60P-201ENST00000517239 SNX29P2Q8IUI4 249 aa2.53□□□□□ -2
RNU4-60P-201ENST00000517239 LYG1Q8N1E2 194 aa2.53□□□□□ -2
RNU4-60P-201ENST00000517239 LINC00612Q8N6U2 182 aa2.53□□□□□ -2
RNU4-60P-201ENST00000517239 MORN4Q8NDC4 146 aa2.53□□□□□ -2
RNU4-60P-201ENST00000517239 OR4B1Q8NGF8 309 aa2.53□□□□□ -2
RNU4-60P-201ENST00000517239 ZNF443Q9Y2A4 671 aaPredicted RBP2.53□□□□□ -2
RNU4-60P-201ENST00000517239 PTPRBP23467 1997 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 COL5A2P05997 1499 aaPredicted RBP2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 RAPGEF2Q9Y4G8 1499 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 TUBGCP6Q96RT7 1819 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 IGHV3-15A0A0B4J1V0 119 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 A0A0G2JMM0 328 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 A0A1W2PPB8 328 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 ZNF727A8MUV8 499 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 KIR3DP1A8MWS1 328 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 TCL1BO95988 128 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 DEFA4P12838 97 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 MUC1P15941 1255 aaPredicted RBP2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 SNRPD3P62318 126 aaKnown RBP2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 DYNLT1P63172 113 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 PLGLB1Q02325 96 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 KLRD1Q13241 179 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 LPAL2Q16609 132 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 MRGPRG-AS1Q2M3A8 158 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 MEIG1Q5JSS6 88 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 ZNF660Q6AZW8 331 aaPredicted RBP2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 C8orf59Q8N0T1 100 aaPredicted RBP2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 ST20-AS1Q8NBB2 130 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 APCDD1LQ8NCL9 501 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 OR10P1Q8NGE3 313 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 OR10AC1Q8NH08 325 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 PP6455Q8WZ26 134 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 PKMYT1Q99640 499 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 COMMD3Q9UBI1 195 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 BOKQ9UMX3 212 aaPredicted RBP2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 ZFP30Q9Y2G7 519 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 FRMPD1Q5SYB0 1578 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 MYOM2P54296 1465 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 SLX4Q8IY92 1834 aa2.52□□□□□ -2.01
RNU4-60P-201ENST00000517239 ZNF609O15014 1411 aa2.51□□□□□ -2.01
RNU4-60P-201ENST00000517239 ABCA7Q8IZY2 2146 aa2.51□□□□□ -2.01
RNU4-60P-201ENST00000517239 SCN8AQ9UQD0 1980 aa2.51□□□□□ -2.01
RNU4-60P-201ENST00000517239 C16orf90A8MZG2 172 aa2.51□□□□□ -2.01
RNU4-60P-201ENST00000517239 SDCBPO00560 298 aaPredicted RBP2.51□□□□□ -2.01
RNU4-60P-201ENST00000517239 UQCRQO14949 82 aa2.51□□□□□ -2.01
RNU4-60P-201ENST00000517239 CISD3P0C7P0 127 aa2.51□□□□□ -2.01
RNU4-60P-201ENST00000517239 DNAH10OSP0CZ25 163 aa2.51□□□□□ -2.01
RNU4-60P-201ENST00000517239 GZMBP10144 247 aa2.51□□□□□ -2.01
RNU4-60P-201ENST00000517239 NFYAP23511 347 aaPredicted RBP2.51□□□□□ -2.01
RNU4-60P-201ENST00000517239 TMEM155Q4W5P6 130 aa2.51□□□□□ -2.01
RNU4-60P-201ENST00000517239 IZUMO2Q6UXV1 221 aa2.51□□□□□ -2.01
RNU4-60P-201ENST00000517239 RPS19BP1Q86WX3 136 aaKnown RBP2.51□□□□□ -2.01
RNU4-60P-201ENST00000517239 RNF182Q8N6D2 247 aa2.51□□□□□ -2.01
RNU4-60P-201ENST00000517239 RPS10P5Q9NQ39 176 aa2.51□□□□□ -2.01
RNU4-60P-201ENST00000517239 CCDC167Q9P0B6 97 aa2.51□□□□□ -2.01
RNU4-60P-201ENST00000517239 TIMM9Q9Y5J7 89 aa2.51□□□□□ -2.01
RNU4-60P-201ENST00000517239 ZNF407Q9C0G0 2248 aa2.51□□□□□ -2.01
RNU4-60P-201ENST00000517239 PZPP20742 1482 aa2.51□□□□□ -2.01
RNU4-60P-201ENST00000517239 HEATR5AQ86XA9 2040 aa2.51□□□□□ -2.01
RNU4-60P-201ENST00000517239 RIC1Q4ADV7 1423 aa2.51□□□□□ -2.01
RNU4-60P-201ENST00000517239 MYH1P12882 1939 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 PCSK5Q92824 1860 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 C7orf71A4D174 169 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 TMEM235A6NFC5 223 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 M0R143 59 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms