RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 WNT10AQ9GZT5 417 aa14.27□□□□□ -0.12
CCHCR1-228ENST00000509552 RPP21Q9H633 154 aaKnown RBP14.27□□□□□ -0.12
CCHCR1-228ENST00000509552 H3BTX0 84 aa14.27□□□□□ -0.13
CCHCR1-228ENST00000509552 I3L2K1 104 aa14.27□□□□□ -0.13
CCHCR1-228ENST00000509552 LTAP01374 205 aa14.27□□□□□ -0.13
CCHCR1-228ENST00000509552 RBM14Q96PK6 669 aaKnown RBP14.27□□□□□ -0.13
CCHCR1-228ENST00000509552 MIEN1Q9BRT3 115 aa14.27□□□□□ -0.13
CCHCR1-228ENST00000509552 PTPRZ1P23471 2315 aaPredicted RBP14.27□□□□□ -0.13
CCHCR1-228ENST00000509552 CAMPP49913 170 aa14.26□□□□□ -0.13
CCHCR1-228ENST00000509552 DAZAP1Q96EP5 407 aaKnown RBP14.26□□□□□ -0.13
CCHCR1-228ENST00000509552 SLC25A39Q9BZJ4 359 aaPredicted RBP14.26□□□□□ -0.13
CCHCR1-228ENST00000509552 TMEM14CQ9P0S9 112 aa14.26□□□□□ -0.13
CCHCR1-228ENST00000509552 A8MWL6 223 aa14.26□□□□□ -0.13
CCHCR1-228ENST00000509552 TIMM23O14925 209 aa14.26□□□□□ -0.13
CCHCR1-228ENST00000509552 P01737 135 aa14.26□□□□□ -0.13
CCHCR1-228ENST00000509552 HTR1DP28221 377 aa14.26□□□□□ -0.13
CCHCR1-228ENST00000509552 GRNP28799 593 aaKnown RBP14.26□□□□□ -0.13
CCHCR1-228ENST00000509552 MMDQ15546 238 aa14.26□□□□□ -0.13
CCHCR1-228ENST00000509552 GDF5OSQ5U4N7 250 aa14.26□□□□□ -0.13
CCHCR1-228ENST00000509552 LY6G5BQ8NDX9 201 aa14.26□□□□□ -0.13
CCHCR1-228ENST00000509552 OR4B1Q8NGF8 309 aa14.26□□□□□ -0.13
CCHCR1-228ENST00000509552 BORCS7Q96B45 105 aa14.26□□□□□ -0.13
CCHCR1-228ENST00000509552 OTORQ9NRC9 128 aa14.26□□□□□ -0.13
CCHCR1-228ENST00000509552 ZNF492Q9P255 531 aa14.26□□□□□ -0.13
CCHCR1-228ENST00000509552 SIAH2O43255 324 aa14.25□□□□□ -0.13
CCHCR1-228ENST00000509552 RAB4AP20338 218 aa14.25□□□□□ -0.13
CCHCR1-228ENST00000509552 NUTF2P61970 127 aaKnown RBP14.25□□□□□ -0.13
CCHCR1-228ENST00000509552 CT83Q5H943 113 aa14.25□□□□□ -0.13
CCHCR1-228ENST00000509552 RAB1BQ9H0U4 201 aa14.25□□□□□ -0.13
CCHCR1-228ENST00000509552 RNF114Q9Y508 228 aa14.25□□□□□ -0.13
CCHCR1-228ENST00000509552 CCL21O00585 134 aa14.25□□□□□ -0.13
CCHCR1-228ENST00000509552 TIMD4Q96H15 378 aa14.25□□□□□ -0.13
CCHCR1-228ENST00000509552 PRSS22Q9GZN4 317 aa14.25□□□□□ -0.13
CCHCR1-228ENST00000509552 DPM3Q9P2X0 92 aa14.25□□□□□ -0.13
CCHCR1-228ENST00000509552 OR2J3O76001 311 aa14.24□□□□□ -0.13
CCHCR1-228ENST00000509552 NTF3P20783 257 aa14.24□□□□□ -0.13
CCHCR1-228ENST00000509552 KLF5Q13887 457 aaPredicted RBP14.24□□□□□ -0.13
CCHCR1-228ENST00000509552 MRPL52Q86TS9 123 aaKnown RBP14.24□□□□□ -0.13
CCHCR1-228ENST00000509552 FAM19A2Q8N3H0 131 aa14.24□□□□□ -0.13
CCHCR1-228ENST00000509552 A0A1B0GXF2 115 aa14.24□□□□□ -0.13
CCHCR1-228ENST00000509552 M0QZK8 103 aa14.24□□□□□ -0.13
CCHCR1-228ENST00000509552 CEACAM3P40198 252 aa14.24□□□□□ -0.13
CCHCR1-228ENST00000509552 HBBP68871 147 aa14.24□□□□□ -0.13
CCHCR1-228ENST00000509552 TCF24Q7RTU0 167 aa14.24□□□□□ -0.13
CCHCR1-228ENST00000509552 SSBP4Q9BWG4 385 aaPredicted RBP14.24□□□□□ -0.13
CCHCR1-228ENST00000509552 SOX21Q9Y651 276 aaPredicted RBP14.24□□□□□ -0.13
CCHCR1-228ENST00000509552 TLN1Q9Y490 2541 aaKnown RBP14.24□□□□□ -0.13
CCHCR1-228ENST00000509552 C19orf71A6NCJ1 209 aa14.23□□□□□ -0.13
CCHCR1-228ENST00000509552 NBR2O15453 112 aa14.23□□□□□ -0.13
CCHCR1-228ENST00000509552 HSBP1O75506 76 aa14.23□□□□□ -0.13
CCHCR1-228ENST00000509552 ARF6P62330 175 aa14.23□□□□□ -0.13
CCHCR1-228ENST00000509552 LINC00322Q6ZN03 302 aaPredicted RBP14.23□□□□□ -0.13
CCHCR1-228ENST00000509552 NIT1Q86X76 327 aa14.23□□□□□ -0.13
CCHCR1-228ENST00000509552 Q8N976 141 aa14.23□□□□□ -0.13
CCHCR1-228ENST00000509552 ALKBH7Q9BT30 221 aaPredicted RBP14.23□□□□□ -0.13
CCHCR1-228ENST00000509552 OR11H6Q8NGC7 330 aa14.23□□□□□ -0.13
CCHCR1-228ENST00000509552 OR2D3Q8NGH3 330 aa14.23□□□□□ -0.13
CCHCR1-228ENST00000509552 TMEM190Q8WZ59 177 aa14.23□□□□□ -0.13
CCHCR1-228ENST00000509552 RNF24Q9Y225 148 aa14.23□□□□□ -0.13
CCHCR1-228ENST00000509552 VWC2LB2RUY7 222 aa14.22□□□□□ -0.13
CCHCR1-228ENST00000509552 IGKV1-17P01599 117 aa14.22□□□□□ -0.13
CCHCR1-228ENST00000509552 C3orf79P0CE67 100 aa14.22□□□□□ -0.13
CCHCR1-228ENST00000509552 GPR6P46095 362 aaPredicted RBP14.22□□□□□ -0.13
CCHCR1-228ENST00000509552 GFRA4Q9GZZ7 299 aa14.22□□□□□ -0.13
CCHCR1-228ENST00000509552 HILPDAQ9Y5L2 63 aa14.22□□□□□ -0.13
CCHCR1-228ENST00000509552 CEP295Q9C0D2 2601 aa14.22□□□□□ -0.13
CCHCR1-228ENST00000509552 K7EIM0 57 aa14.21□□□□□ -0.13
CCHCR1-228ENST00000509552 LDLRAD2Q5SZI1 272 aa14.21□□□□□ -0.13
CCHCR1-228ENST00000509552 Q86TA4 180 aa14.21□□□□□ -0.13
CCHCR1-228ENST00000509552 BPIFA4PQ86YQ2 179 aa14.21□□□□□ -0.13
CCHCR1-228ENST00000509552 TCAPO15273 167 aa14.21□□□□□ -0.13
CCHCR1-228ENST00000509552 OR4F17Q8NGA8 305 aa14.21□□□□□ -0.13
CCHCR1-228ENST00000509552 RBPMS2Q6ZRY4 209 aaKnown RBP14.2□□□□□ -0.14
CCHCR1-228ENST00000509552 GOLT1AQ6ZVE7 132 aa14.2□□□□□ -0.14
CCHCR1-228ENST00000509552 EXOC3-AS1Q8N2X6 119 aa14.2□□□□□ -0.14
CCHCR1-228ENST00000509552 PGLYRP4Q96LB8 373 aa14.2□□□□□ -0.14
CCHCR1-228ENST00000509552 SHANK2-AS3Q9BTD1 123 aa14.2□□□□□ -0.14
CCHCR1-228ENST00000509552 ANKHD1Q8IWZ3 2542 aaKnown RBP14.2□□□□□ -0.14
CCHCR1-228ENST00000509552 FAM231BA6NCW3 169 aa14.2□□□□□ -0.14
CCHCR1-228ENST00000509552 LY6HO94772 140 aa14.2□□□□□ -0.14
CCHCR1-228ENST00000509552 COL8A1P27658 744 aa14.2□□□□□ -0.14
CCHCR1-228ENST00000509552 FAM162BQ5T6X4 162 aa14.2□□□□□ -0.14
CCHCR1-228ENST00000509552 PRNTQ86SH4 94 aa14.2□□□□□ -0.14
CCHCR1-228ENST00000509552 NPBQ8NG41 125 aa14.2□□□□□ -0.14
CCHCR1-228ENST00000509552 GTSF1Q8WW33 167 aa14.2□□□□□ -0.14
CCHCR1-228ENST00000509552 PTPRQQ9UMZ3 2332 aa14.2□□□□□ -0.14
CCHCR1-228ENST00000509552 TPRP12270 2363 aaKnown RBP14.2□□□□□ -0.14
CCHCR1-228ENST00000509552 LOC105371242A0A075B767 164 aa14.19□□□□□ -0.14
CCHCR1-228ENST00000509552 M0R1W7 72 aa14.19□□□□□ -0.14
CCHCR1-228ENST00000509552 M0R2Z0 102 aa14.19□□□□□ -0.14
CCHCR1-228ENST00000509552 HES1Q14469 280 aa14.19□□□□□ -0.14
CCHCR1-228ENST00000509552 SPATA45Q537H7 98 aa14.19□□□□□ -0.14
CCHCR1-228ENST00000509552 RNASEKQ6P5S7 137 aaKnown RBP14.19□□□□□ -0.14
CCHCR1-228ENST00000509552 CFHR4Q92496 578 aa14.19□□□□□ -0.14
CCHCR1-228ENST00000509552 TRAV8-1A0A0A6YYK1 113 aa14.19□□□□□ -0.14
CCHCR1-228ENST00000509552 H3BRN7 92 aa14.19□□□□□ -0.14
CCHCR1-228ENST00000509552 TOX4O94842 621 aa14.19□□□□□ -0.14
CCHCR1-228ENST00000509552 NDUFA3O95167 84 aa14.19□□□□□ -0.14
CCHCR1-228ENST00000509552 S100A7AQ86SG5 101 aa14.19□□□□□ -0.14
CCHCR1-228ENST00000509552 TRBV19A0A075B6N1 114 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms