RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 K7EPK0 472 aa17.7■□□□□ 0.42
SRPK1-210ENST00000508473 CFDP00746 253 aaPredicted RBP17.7■□□□□ 0.42
SRPK1-210ENST00000508473 ORM2P19652 201 aa17.7■□□□□ 0.42
SRPK1-210ENST00000508473 DLK1P80370 383 aa17.7■□□□□ 0.42
SRPK1-210ENST00000508473 CYP2G1PQ6ZSU1 146 aa17.7■□□□□ 0.42
SRPK1-210ENST00000508473 C2orf50Q96LR7 162 aa17.7■□□□□ 0.42
SRPK1-210ENST00000508473 IL5P05113 134 aa17.69■□□□□ 0.42
SRPK1-210ENST00000508473 SNRPD3P62318 126 aaKnown RBP17.69■□□□□ 0.42
SRPK1-210ENST00000508473 ARL16Q0P5N6 197 aa17.69■□□□□ 0.42
SRPK1-210ENST00000508473 TRPT1Q86TN4 253 aaKnown RBP17.69■□□□□ 0.42
SRPK1-210ENST00000508473 OR8I2Q8N0Y5 310 aa17.69■□□□□ 0.42
SRPK1-210ENST00000508473 OR1B1Q8NGR6 318 aa17.69■□□□□ 0.42
SRPK1-210ENST00000508473 IL17DQ8TAD2 202 aa17.69■□□□□ 0.42
SRPK1-210ENST00000508473 DOK5Q9P104 306 aa17.69■□□□□ 0.42
SRPK1-210ENST00000508473 BCAP31P51572 246 aa17.68■□□□□ 0.42
SRPK1-210ENST00000508473 C1orf194Q5T5A4 169 aa17.68■□□□□ 0.42
SRPK1-210ENST00000508473 NRARPQ7Z6K4 114 aa17.68■□□□□ 0.42
SRPK1-210ENST00000508473 SLC25A22Q9H936 323 aa17.68■□□□□ 0.42
SRPK1-210ENST00000508473 MGAT4CQ9UBM8 478 aa17.68■□□□□ 0.42
SRPK1-210ENST00000508473 FBXL17Q9UF56 701 aa17.68■□□□□ 0.42
SRPK1-210ENST00000508473 AGRNO00468 2067 aa17.67■□□□□ 0.42
SRPK1-210ENST00000508473 S100A10P60903 97 aa17.67■□□□□ 0.42
SRPK1-210ENST00000508473 EWSR1Q01844 656 aaKnown RBP eCLIP17.67■□□□□ 0.42
SRPK1-210ENST00000508473 TMEM147Q9BVK8 224 aa17.67■□□□□ 0.42
SRPK1-210ENST00000508473 STARD9Q9P2P6 4700 aa17.66■□□□□ 0.42
SRPK1-210ENST00000508473 GATAD1Q8WUU5 269 aa17.66■□□□□ 0.42
SRPK1-210ENST00000508473 RARRES2Q99969 163 aa17.66■□□□□ 0.42
SRPK1-210ENST00000508473 SLC25A32Q9H2D1 315 aa17.66■□□□□ 0.42
SRPK1-210ENST00000508473 GPN1Q9HCN4 374 aaPredicted RBP17.66■□□□□ 0.42
SRPK1-210ENST00000508473 NPVFQ9HCQ7 196 aa17.66■□□□□ 0.42
SRPK1-210ENST00000508473 FAM24AA6NFZ4 105 aa17.65■□□□□ 0.42
SRPK1-210ENST00000508473 ZNF98A6NK75 572 aa17.65■□□□□ 0.42
SRPK1-210ENST00000508473 CAV2P51636 162 aa17.65■□□□□ 0.42
SRPK1-210ENST00000508473 SLC38A11Q08AI6 406 aa17.65■□□□□ 0.42
SRPK1-210ENST00000508473 OR11H2Q8NH07 326 aa17.65■□□□□ 0.42
SRPK1-210ENST00000508473 LINC00052Q96N35 136 aa17.65■□□□□ 0.42
SRPK1-210ENST00000508473 SEPSECSQ9HD40 501 aaKnown RBP17.65■□□□□ 0.42
SRPK1-210ENST00000508473 SLC45A2Q9UMX9 530 aa17.65■□□□□ 0.42
SRPK1-210ENST00000508473 FNDC10F2Z333 226 aa17.64■□□□□ 0.41
SRPK1-210ENST00000508473 GIG44P09565 113 aaPredicted RBP17.64■□□□□ 0.41
SRPK1-210ENST00000508473 LINC00869P0C866 280 aa17.64■□□□□ 0.41
SRPK1-210ENST00000508473 DEFB1P60022 68 aa17.64■□□□□ 0.41
SRPK1-210ENST00000508473 C11orf1Q9H5F2 150 aa17.64■□□□□ 0.41
SRPK1-210ENST00000508473 INMT-MINDY4F8WBC2 141 aa17.63■□□□□ 0.41
SRPK1-210ENST00000508473 CST7O76096 145 aa17.63■□□□□ 0.41
SRPK1-210ENST00000508473 C4BPBP20851 252 aa17.63■□□□□ 0.41
SRPK1-210ENST00000508473 IL15RAQ13261 267 aa17.63■□□□□ 0.41
SRPK1-210ENST00000508473 RAB32Q13637 225 aa17.63■□□□□ 0.41
SRPK1-210ENST00000508473 MORN3Q6PF18 240 aaPredicted RBP17.63■□□□□ 0.41
SRPK1-210ENST00000508473 TEPPQ6URK8 271 aa17.63■□□□□ 0.41
SRPK1-210ENST00000508473 SCRT1Q9BWW7 348 aa17.63■□□□□ 0.41
SRPK1-210ENST00000508473 SOCS3O14543 225 aa17.62■□□□□ 0.41
SRPK1-210ENST00000508473 HYPMO75409 117 aa17.62■□□□□ 0.41
SRPK1-210ENST00000508473 DEDDO75618 318 aa17.62■□□□□ 0.41
SRPK1-210ENST00000508473 SIX6O95475 246 aa17.62■□□□□ 0.41
SRPK1-210ENST00000508473 OR5G3P0C626 314 aa17.62■□□□□ 0.41
SRPK1-210ENST00000508473 SPP1P10451 314 aa17.62■□□□□ 0.41
SRPK1-210ENST00000508473 PVALBP20472 110 aaPredicted RBP17.62■□□□□ 0.41
SRPK1-210ENST00000508473 ID1P41134 155 aa17.62■□□□□ 0.41
SRPK1-210ENST00000508473 GALR1P47211 349 aa17.62■□□□□ 0.41
SRPK1-210ENST00000508473 PMS2P11Q13670 270 aa17.62■□□□□ 0.41
SRPK1-210ENST00000508473 TMEM217Q8N7C4 229 aa17.62■□□□□ 0.41
SRPK1-210ENST00000508473 RSG1Q9BU20 258 aa17.62■□□□□ 0.41
SRPK1-210ENST00000508473 GGACTQ9BVM4 153 aa17.62■□□□□ 0.41
SRPK1-210ENST00000508473 HIGD1AQ9Y241 93 aa17.62■□□□□ 0.41
SRPK1-210ENST00000508473 RYR3Q15413 4870 aa17.62■□□□□ 0.41
SRPK1-210ENST00000508473 DYNC2H1Q8NCM8 4307 aaKnown RBP17.62■□□□□ 0.41
SRPK1-210ENST00000508473 GOSR2O14653 212 aa17.61■□□□□ 0.41
SRPK1-210ENST00000508473 DEFA1P59665 94 aa17.61■□□□□ 0.41
SRPK1-210ENST00000508473 DEFA3P59666 94 aa17.61■□□□□ 0.41
SRPK1-210ENST00000508473 RAP2BP61225 183 aa17.61■□□□□ 0.41
SRPK1-210ENST00000508473 SELENOTP62341 195 aa17.61■□□□□ 0.41
SRPK1-210ENST00000508473 SLC25A39Q9BZJ4 359 aaPredicted RBP17.61■□□□□ 0.41
SRPK1-210ENST00000508473 CLEC5AQ9NY25 188 aa17.61■□□□□ 0.41
SRPK1-210ENST00000508473 H3BMM0 161 aa17.6■□□□□ 0.41
SRPK1-210ENST00000508473 H3BRN7 92 aa17.6■□□□□ 0.41
SRPK1-210ENST00000508473 S100A7P31151 101 aa17.6■□□□□ 0.41
SRPK1-210ENST00000508473 PSMB3P49720 205 aa17.6■□□□□ 0.41
SRPK1-210ENST00000508473 GDF5OSQ5U4N7 250 aa17.6■□□□□ 0.41
SRPK1-210ENST00000508473 UHRF2Q96PU4 802 aa17.6■□□□□ 0.41
SRPK1-210ENST00000508473 SHANK2-AS3Q9BTD1 123 aa17.6■□□□□ 0.41
SRPK1-210ENST00000508473 ARL6Q9H0F7 186 aa17.6■□□□□ 0.41
SRPK1-210ENST00000508473 CSMD3Q7Z407 3707 aa17.59■□□□□ 0.41
SRPK1-210ENST00000508473 CXorf65A6NEN9 183 aa17.59■□□□□ 0.41
SRPK1-210ENST00000508473 AGPAT2O15120 278 aa17.59■□□□□ 0.41
SRPK1-210ENST00000508473 PRAF2O60831 178 aa17.59■□□□□ 0.41
SRPK1-210ENST00000508473 PLP1P60201 277 aa17.59■□□□□ 0.41
SRPK1-210ENST00000508473 C16orf92Q96LL3 132 aa17.59■□□□□ 0.41
SRPK1-210ENST00000508473 C17orf77Q96MU5 243 aa17.59■□□□□ 0.41
SRPK1-210ENST00000508473 IGSF23A1L1A6 192 aa17.58■□□□□ 0.4
SRPK1-210ENST00000508473 DEFB4AO15263 64 aa17.58■□□□□ 0.4
SRPK1-210ENST00000508473 IGKV3-20P01619 116 aa17.58■□□□□ 0.4
SRPK1-210ENST00000508473 HLA-DRB4P13762 266 aa17.58■□□□□ 0.4
SRPK1-210ENST00000508473 ZNF546Q86UE3 836 aa17.58■□□□□ 0.4
SRPK1-210ENST00000508473 MGST2Q99735 147 aa17.58■□□□□ 0.4
SRPK1-210ENST00000508473 LYRM2Q9NU23 88 aaPredicted RBP17.58■□□□□ 0.4
SRPK1-210ENST00000508473 HLA-DRB4X5D2U9 266 aa17.58■□□□□ 0.4
SRPK1-210ENST00000508473 ISLRO14498 428 aa17.57■□□□□ 0.4
SRPK1-210ENST00000508473 TMEM41BQ5BJD5 291 aa17.57■□□□□ 0.4
SRPK1-210ENST00000508473 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms