RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 SYCNQ0VAF6 134 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 ALKAL2Q6UX46 152 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 MORN4Q8NDC4 146 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 BPIFB6Q8NFQ5 453 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 RNF122Q9H9V4 155 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 SLC39A9Q9NUM3 307 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 ZNF581Q9P0T4 197 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 HHLA3Q9XRX5 114 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 MCM3APO60318 1980 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 MYO18AQ92614 2054 aaKnown RBP3.57□□□□□ -1.84
NIPBL-204ENST00000504430 IGHV5-51A0A0C4DH38 117 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 B4DSR2 109 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 OR5AC1P0C628 307 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 NUDT2P50583 147 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 Q8N2B8 174 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 OTOSQ8NHW6 89 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 VAMP8Q9BV40 100 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 DUSP21Q9H596 190 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 C11orf1Q9H5F2 150 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 LINC00574Q9H8X3 128 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 PSME4Q14997 1843 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 IGLV3-9A0A075B6K5 115 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 MEIS3P1A6NDR6 274 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 CYSRT1A8MQ03 144 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 TNFP01375 233 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 CD3DP04234 171 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 U3KQK5 164 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 ADGRL2O95490 1459 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 A6NDX4 124 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 HRASP01112 189 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 PRB4P10163 310 aaPredicted RBP3.56□□□□□ -1.84
NIPBL-204ENST00000504430 TPT1P13693 172 aaKnown RBP3.56□□□□□ -1.84
NIPBL-204ENST00000504430 C16orf47Q6ZP98 133 aaPredicted RBP3.56□□□□□ -1.84
NIPBL-204ENST00000504430 FP248Q71RG6 208 aaPredicted RBP3.56□□□□□ -1.84
NIPBL-204ENST00000504430 SVBPQ8N300 66 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 Q8N9W7 124 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 OR10P1Q8NGE3 313 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 C1orf147Q96MC9 270 aaPredicted RBP3.56□□□□□ -1.84
NIPBL-204ENST00000504430 OPRPNQ99935 248 aaPredicted RBP3.56□□□□□ -1.84
NIPBL-204ENST00000504430 CCDC167Q9P0B6 97 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 MPC1Q9Y5U8 109 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 LINC00312Q9Y6C7 94 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 NAIPQ13075 1403 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 CAMSAP2Q08AD1 1489 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 QRICH2Q9H0J4 1663 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 SIPA1L1O43166 1804 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 SDK2Q58EX2 2172 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 IGHV7-4-1A0A0J9YVY3 117 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 C7orf66A4D0T2 115 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 C17orf51A8MQB3 221 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 NDUFB3O43676 98 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 NMBP08949 121 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 SCN1AP35498 2009 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 C7orf65Q6ZTY9 151 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 ADGBQ8N7X0 1667 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 Q8N976 141 aa3.56□□□□□ -1.84
NIPBL-204ENST00000504430 ATRXP46100 2492 aa3.55□□□□□ -1.84
NIPBL-204ENST00000504430 SOD1P00441 154 aa3.55□□□□□ -1.84
NIPBL-204ENST00000504430 P0C879 139 aa3.55□□□□□ -1.84
NIPBL-204ENST00000504430 DYNLT1P63172 113 aa3.55□□□□□ -1.84
NIPBL-204ENST00000504430 SUPT4H1P63272 117 aaKnown RBP3.55□□□□□ -1.84
NIPBL-204ENST00000504430 AKR1C1Q04828 323 aa3.55□□□□□ -1.84
NIPBL-204ENST00000504430 ZNF846Q147U1 533 aa3.55□□□□□ -1.84
NIPBL-204ENST00000504430 CDK5R1Q15078 307 aa3.55□□□□□ -1.84
NIPBL-204ENST00000504430 NTM-AS1Q6ZSK4 140 aa3.55□□□□□ -1.84
NIPBL-204ENST00000504430 OR4X2Q8NGF9 303 aa3.55□□□□□ -1.84
NIPBL-204ENST00000504430 IGHV3-66A0A0C4DH42 116 aa3.55□□□□□ -1.84
NIPBL-204ENST00000504430 TMEM223A0PJW6 202 aa3.55□□□□□ -1.84
NIPBL-204ENST00000504430 H3BT86 120 aa3.55□□□□□ -1.84
NIPBL-204ENST00000504430 AMN1Q8IY45 258 aa3.55□□□□□ -1.84
NIPBL-204ENST00000504430 DIRC1Q969H9 104 aa3.55□□□□□ -1.84
NIPBL-204ENST00000504430 RPRMQ9NS64 109 aa3.55□□□□□ -1.84
NIPBL-204ENST00000504430 YEATS2Q9ULM3 1422 aa3.55□□□□□ -1.84
NIPBL-204ENST00000504430 ANKRD26Q9UPS8 1709 aa3.54□□□□□ -1.84
NIPBL-204ENST00000504430 TRAV12-2A0A075B6T6 113 aa3.54□□□□□ -1.84
NIPBL-204ENST00000504430 HIST1H2BKO60814 126 aa3.54□□□□□ -1.84
NIPBL-204ENST00000504430 HIST1H2BJP06899 126 aa3.54□□□□□ -1.84
NIPBL-204ENST00000504430 PATE2Q6UY27 113 aa3.54□□□□□ -1.84
NIPBL-204ENST00000504430 HIST3H2BBQ8N257 126 aa3.54□□□□□ -1.84
NIPBL-204ENST00000504430 C15orf56Q8N910 161 aa3.54□□□□□ -1.84
NIPBL-204ENST00000504430 OR10AC1Q8NH08 325 aa3.54□□□□□ -1.84
NIPBL-204ENST00000504430 DPY30Q9C005 99 aa3.54□□□□□ -1.84
NIPBL-204ENST00000504430 MAP3K1Q13233 1512 aa3.54□□□□□ -1.84
NIPBL-204ENST00000504430 ZNF737O75373 536 aa3.54□□□□□ -1.84
NIPBL-204ENST00000504430 SLC25A4P12235 298 aa3.54□□□□□ -1.84
NIPBL-204ENST00000504430 UBE2AP49459 152 aa3.54□□□□□ -1.84
NIPBL-204ENST00000504430 EIF5AL1Q6IS14 154 aaKnown RBP3.54□□□□□ -1.84
NIPBL-204ENST00000504430 HIST1H2BLQ99880 126 aa3.54□□□□□ -1.84
NIPBL-204ENST00000504430 BAZ1AQ9NRL2 1556 aaPredicted RBP3.54□□□□□ -1.84
NIPBL-204ENST00000504430 ZNF646O15015 1829 aaPredicted RBP3.54□□□□□ -1.84
NIPBL-204ENST00000504430 IGHV3OR15-7A0A075B7D8 119 aa3.54□□□□□ -1.84
NIPBL-204ENST00000504430 A0A087WYN8 130 aa3.54□□□□□ -1.84
NIPBL-204ENST00000504430 H3BQ15 152 aa3.54□□□□□ -1.84
NIPBL-204ENST00000504430 UQCRQO14949 82 aa3.54□□□□□ -1.84
NIPBL-204ENST00000504430 C9orf129Q5T035 196 aaKnown RBP3.54□□□□□ -1.84
NIPBL-204ENST00000504430 LINC00526Q96FQ7 95 aa3.54□□□□□ -1.84
NIPBL-204ENST00000504430 C16orf74Q96GX8 76 aa3.54□□□□□ -1.84
NIPBL-204ENST00000504430 ASF1BQ9NVP2 202 aa3.54□□□□□ -1.84
NIPBL-204ENST00000504430 DLC1Q96QB1 1528 aa3.54□□□□□ -1.84
NIPBL-204ENST00000504430 FAM72CH0Y354 149 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms