RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 MRPL16Q9NX20 251 aaKnown RBP1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 CALML5Q9NZT1 146 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 HS3ST2Q9Y278 367 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 MINOS1-NBL1R4GNA1 71 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 TOPBP1Q92547 1522 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 SIPA1L1O43166 1804 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 XIRP1Q702N8 1843 aaKnown RBP1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 ADGRL1O94910 1474 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 A2MP01023 1474 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 TRAPPC8Q9Y2L5 1435 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 CACNA1SQ13698 1873 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 MED1Q15648 1581 aaPredicted RBP1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 TRAV13-1A0A0B4J241 112 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 IGHV1-18A0A0C4DH31 117 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 LOC107984640A0A0U1RRK4 108 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 ODAMA1E959 279 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 A8MWV9 139 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 MIF4GDA9UHW6 222 aaKnown RBP1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 J3QQQ9 107 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 CXCL1P09341 107 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 PAEPP09466 180 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 RPL22P35268 128 aaKnown RBP1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 ARPP19P56211 112 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 LSM3P62310 102 aaKnown RBP1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 FOXF1Q12946 379 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 TMEM244Q5VVB8 128 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 C4orf22Q6V702 233 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 DEFB128Q7Z7B8 93 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 MMGT1Q8N4V1 131 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 WFDC11Q8NEX6 87 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 TSTD1Q8NFU3 115 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 OR4E2Q8NGC2 313 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 MRPS24Q96EL2 167 aaKnown RBP1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 MCEEQ96PE7 176 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 C2orf88Q9BSF0 95 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 SMIM3Q9BZL3 60 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 CBLN4Q9NTU7 201 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 BAIAP2Q9UQB8 552 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 HHLA3Q9XRX5 114 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 HSPE1-MOB4S4R3N1 261 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 SCN4AP35499 1836 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 VIRMAQ69YN4 1812 aaKnown RBP1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 UBR2Q8IWV8 1755 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 FBN3Q75N90 2809 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 DENND4CQ5VZ89 1909 aa1.23□□□□□ -2.21
HMGB1P35-201ENST00000503360 ZNF106Q9H2Y7 1883 aaKnown RBP1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 MAST2Q6P0Q8 1798 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 MEIKINA0A087WXM9 373 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 IGKV2-24A0A0C4DH68 120 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 A0A0J9YX75 114 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 TRBV27A0A0K0K1C4 114 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 A0A1B0GV90 55 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 A0A1B0GW64 132 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 FAM92AA1XBS5 289 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 CCDC160A6NGH7 325 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 G3V3Q6 166 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 SDCBPO00560 298 aaPredicted RBP1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 RER1O15258 196 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 IGKV4-1P06312 121 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 ZNF705BP0CI00 300 aaPredicted RBP1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 NCS1P62166 190 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 DYNLT1P63172 113 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 C3orf56Q8N813 242 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 SLC30A7Q8NEW0 376 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 OR4B1Q8NGF8 309 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 OR5A2Q8NGI9 324 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 OR4K15Q8NH41 348 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 TP53RKQ96S44 253 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 LINC00467Q9BRT7 94 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 NDUFB11Q9NX14 153 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 OR5AC2Q9NZP5 309 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 PSORS1C2Q9UIG4 136 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 ERG28Q9UKR5 140 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 OVOS2A0A0J9YW53 1432 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 DISP2A7MBM2 1401 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 RIC1Q4ADV7 1423 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 OVOS2Q6IE36 1432 aa1.22□□□□□ -2.21
HMGB1P35-201ENST00000503360 PRR14LQ5THK1 2151 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 TRPM3Q9HCF6 1732 aaPredicted RBP1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 NCAPD3P42695 1498 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 LINC00587B1AMM8 73 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 F8W036 122 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 K7ERU9 68 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 DLEU1O43261 78 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 PGLYRP1O75594 196 aaPredicted RBP1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 MT-ND4LP03901 98 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 MT-ND6P03923 174 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 GPX1P07203 203 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 TSPAN19P0C672 248 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 HRES1P13985 223 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 S100PP25815 95 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 RRAS2P62070 204 aaPredicted RBP1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 MRPS36P82909 103 aaKnown RBP1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 QRFPP83859 136 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 ZNF90Q03938 601 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 DEFB134Q4QY38 66 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 TMEM155Q4W5P6 130 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 PYDC2Q56P42 97 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 FAM27BQ5VT28 67 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 Q5XG85 94 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms