RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 STPG3Q8N7X2 389 aa11.64□□□□□ -0.55
CPNE1-228ENST00000498814 CHAC2Q8WUX2 184 aa11.64□□□□□ -0.55
CPNE1-228ENST00000498814 HSPB11Q9Y547 144 aa11.64□□□□□ -0.55
CPNE1-228ENST00000498814 TRAV2A0A0B4J234 112 aa11.63□□□□□ -0.55
CPNE1-228ENST00000498814 A8MZ25 164 aa11.63□□□□□ -0.55
CPNE1-228ENST00000498814 MPDU1O75352 247 aa11.63□□□□□ -0.55
CPNE1-228ENST00000498814 S100A7P31151 101 aa11.63□□□□□ -0.55
CPNE1-228ENST00000498814 AP2S1P53680 142 aaPredicted RBP11.63□□□□□ -0.55
CPNE1-228ENST00000498814 RPL11P62913 178 aaKnown RBP11.63□□□□□ -0.55
CPNE1-228ENST00000498814 PAFAH1B2P68402 229 aa11.63□□□□□ -0.55
CPNE1-228ENST00000498814 Q5BKY6 102 aa11.63□□□□□ -0.55
CPNE1-228ENST00000498814 C1orf194Q5T5A4 169 aa11.63□□□□□ -0.55
CPNE1-228ENST00000498814 PXDC1Q5TGL8 231 aa11.63□□□□□ -0.55
CPNE1-228ENST00000498814 OR1B1Q8NGR6 318 aa11.63□□□□□ -0.55
CPNE1-228ENST00000498814 MS4A6AQ9H2W1 248 aa11.63□□□□□ -0.55
CPNE1-228ENST00000498814 C19orf73Q9NVV2 129 aa11.63□□□□□ -0.55
CPNE1-228ENST00000498814 IGKV3-7A0A075B6H7 116 aa11.62□□□□□ -0.55
CPNE1-228ENST00000498814 HYPMO75409 117 aa11.62□□□□□ -0.55
CPNE1-228ENST00000498814 IGHV4-30-4P0DP06 118 aa11.62□□□□□ -0.55
CPNE1-228ENST00000498814 CLINT1Q14677 625 aa11.62□□□□□ -0.55
CPNE1-228ENST00000498814 GBGT1Q8N5D6 347 aa11.62□□□□□ -0.55
CPNE1-228ENST00000498814 OR2T35Q8NGX2 323 aa11.62□□□□□ -0.55
CPNE1-228ENST00000498814 PPP1R14BQ96C90 147 aa11.62□□□□□ -0.55
CPNE1-228ENST00000498814 FAM110AQ9BQ89 295 aa11.62□□□□□ -0.55
CPNE1-228ENST00000498814 GGTLC1Q9BX51 225 aa11.62□□□□□ -0.55
CPNE1-228ENST00000498814 FBXL17Q9UF56 701 aa11.62□□□□□ -0.55
CPNE1-228ENST00000498814 OR11H12B2RN74 326 aa11.61□□□□□ -0.55
CPNE1-228ENST00000498814 DNASE2O00115 360 aaPredicted RBP11.61□□□□□ -0.55
CPNE1-228ENST00000498814 FGF7P21781 194 aa11.61□□□□□ -0.55
CPNE1-228ENST00000498814 RPL29P47914 159 aaKnown RBP11.61□□□□□ -0.55
CPNE1-228ENST00000498814 TFPI2P48307 235 aa11.61□□□□□ -0.55
CPNE1-228ENST00000498814 CMC4P56277 68 aaPredicted RBP11.61□□□□□ -0.55
CPNE1-228ENST00000498814 PRR20EP86478 221 aa11.61□□□□□ -0.55
CPNE1-228ENST00000498814 PRR20CP86479 221 aa11.61□□□□□ -0.55
CPNE1-228ENST00000498814 PRR20DP86480 221 aa11.61□□□□□ -0.55
CPNE1-228ENST00000498814 PRR20BP86481 221 aa11.61□□□□□ -0.55
CPNE1-228ENST00000498814 PRR20AP86496 221 aa11.61□□□□□ -0.55
CPNE1-228ENST00000498814 OPCMLQ14982 345 aa11.61□□□□□ -0.55
CPNE1-228ENST00000498814 SIGLEC15Q6ZMC9 328 aa11.61□□□□□ -0.55
CPNE1-228ENST00000498814 S100A7AQ86SG5 101 aa11.61□□□□□ -0.55
CPNE1-228ENST00000498814 ATP5SQ99766 215 aa11.61□□□□□ -0.55
CPNE1-228ENST00000498814 ARL6Q9H0F7 186 aa11.61□□□□□ -0.55
CPNE1-228ENST00000498814 DOK5Q9P104 306 aa11.61□□□□□ -0.55
CPNE1-228ENST00000498814 HIGD1AQ9Y241 93 aa11.61□□□□□ -0.55
CPNE1-228ENST00000498814 TGP01266 2768 aa11.61□□□□□ -0.55
CPNE1-228ENST00000498814 ZNF98A6NK75 572 aa11.6□□□□□ -0.55
CPNE1-228ENST00000498814 OR5G3P0C626 314 aa11.6□□□□□ -0.55
CPNE1-228ENST00000498814 ODF3L2Q3SX64 289 aa11.6□□□□□ -0.55
CPNE1-228ENST00000498814 PATE2Q6UY27 113 aa11.6□□□□□ -0.55
CPNE1-228ENST00000498814 Q6ZNX1 250 aa11.6□□□□□ -0.55
CPNE1-228ENST00000498814 STXBP6Q8NFX7 210 aa11.6□□□□□ -0.55
CPNE1-228ENST00000498814 AQP10Q96PS8 301 aa11.6□□□□□ -0.55
CPNE1-228ENST00000498814 B9D2Q9BPU9 175 aa11.6□□□□□ -0.55
CPNE1-228ENST00000498814 SHANK2-AS3Q9BTD1 123 aa11.6□□□□□ -0.55
CPNE1-228ENST00000498814 SLC25A39Q9BZJ4 359 aaPredicted RBP11.6□□□□□ -0.55
CPNE1-228ENST00000498814 WDR61Q9GZS3 305 aaKnown RBP11.6□□□□□ -0.55
CPNE1-228ENST00000498814 H3BRN7 92 aa11.59□□□□□ -0.55
CPNE1-228ENST00000498814 K7EQG2 157 aa11.59□□□□□ -0.55
CPNE1-228ENST00000498814 FRMD6-AS1P0C7T7 363 aa11.59□□□□□ -0.55
CPNE1-228ENST00000498814 MIC13Q5XKP0 118 aa11.59□□□□□ -0.55
CPNE1-228ENST00000498814 Q6ZRG5 221 aa11.59□□□□□ -0.55
CPNE1-228ENST00000498814 WFDC3Q8IUB2 231 aa11.59□□□□□ -0.55
CPNE1-228ENST00000498814 OR8I2Q8N0Y5 310 aa11.59□□□□□ -0.55
CPNE1-228ENST00000498814 DEFB125Q8N687 156 aa11.59□□□□□ -0.55
CPNE1-228ENST00000498814 DCANP1Q8TF63 244 aa11.59□□□□□ -0.55
CPNE1-228ENST00000498814 NPCDR1Q9BY65 106 aa11.59□□□□□ -0.55
CPNE1-228ENST00000498814 WFDC10AQ9H1F0 79 aa11.59□□□□□ -0.55
CPNE1-228ENST00000498814 ARV1Q9H2C2 271 aa11.59□□□□□ -0.55
CPNE1-228ENST00000498814 TUBA4BQ9H853 241 aa11.59□□□□□ -0.55
CPNE1-228ENST00000498814 NRN1Q9NPD7 142 aa11.59□□□□□ -0.55
CPNE1-228ENST00000498814 ELOA3CA0A087WX78 387 aaPredicted RBP11.58□□□□□ -0.56
CPNE1-228ENST00000498814 G3V3Q6 166 aa11.58□□□□□ -0.56
CPNE1-228ENST00000498814 TMEM37Q8WXS4 190 aa11.58□□□□□ -0.56
CPNE1-228ENST00000498814 GPR82Q96P67 336 aa11.58□□□□□ -0.56
CPNE1-228ENST00000498814 SCRT1Q9BWW7 348 aa11.58□□□□□ -0.56
CPNE1-228ENST00000498814 SMIM3Q9BZL3 60 aa11.58□□□□□ -0.56
CPNE1-228ENST00000498814 SLC25A22Q9H936 323 aa11.58□□□□□ -0.56
CPNE1-228ENST00000498814 SLC39A9Q9NUM3 307 aa11.58□□□□□ -0.56
CPNE1-228ENST00000498814 UBQLN2Q9UHD9 624 aa11.58□□□□□ -0.56
CPNE1-228ENST00000498814 RNF24Q9Y225 148 aa11.58□□□□□ -0.56
CPNE1-228ENST00000498814 PXMP4Q9Y6I8 212 aa11.58□□□□□ -0.56
CPNE1-228ENST00000498814 FXYD6-FXYD2A0A087WZ82 144 aa11.57□□□□□ -0.56
CPNE1-228ENST00000498814 COX7A2P2O60397 106 aa11.57□□□□□ -0.56
CPNE1-228ENST00000498814 IFNA5P01569 189 aa11.57□□□□□ -0.56
CPNE1-228ENST00000498814 B2MP61769 119 aa11.57□□□□□ -0.56
CPNE1-228ENST00000498814 LINC00322Q6ZN03 302 aaPredicted RBP11.57□□□□□ -0.56
CPNE1-228ENST00000498814 ZNF709Q8N972 641 aa11.57□□□□□ -0.56
CPNE1-228ENST00000498814 INO80EQ8NBZ0 244 aaPredicted RBP11.57□□□□□ -0.56
CPNE1-228ENST00000498814 OR1L4Q8NGR5 311 aa11.57□□□□□ -0.56
CPNE1-228ENST00000498814 UHRF2Q96PU4 802 aa11.57□□□□□ -0.56
CPNE1-228ENST00000498814 PARD6GQ9BYG4 376 aaPredicted RBP11.57□□□□□ -0.56
CPNE1-228ENST00000498814 SLC25A32Q9H2D1 315 aa11.57□□□□□ -0.56
CPNE1-228ENST00000498814 SRD5A3Q9H8P0 318 aa11.57□□□□□ -0.56
CPNE1-228ENST00000498814 MAP6D1Q9H9H5 199 aa11.57□□□□□ -0.56
CPNE1-228ENST00000498814 WFDC1Q9HC57 220 aa11.57□□□□□ -0.56
CPNE1-228ENST00000498814 SEPSECSQ9HD40 501 aaKnown RBP11.57□□□□□ -0.56
CPNE1-228ENST00000498814 DNAJC4Q9NNZ3 241 aa11.57□□□□□ -0.56
CPNE1-228ENST00000498814 KCNIP2Q9NS61 270 aa11.57□□□□□ -0.56
CPNE1-228ENST00000498814 TNFSF18Q9UNG2 199 aa11.57□□□□□ -0.56
CPNE1-228ENST00000498814 GALR1P47211 349 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms