RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 GLTPQ9NZD2 209 aa0.1□□□□□ -2.39
SMC4-227ENST00000497984 PCTPQ9UKL6 214 aa0.1□□□□□ -2.39
SMC4-227ENST00000497984 STAB1Q9NY15 2570 aa0.09□□□□□ -2.39
SMC4-227ENST00000497984 RTL1A6NKG5 1358 aa0.09□□□□□ -2.39
SMC4-227ENST00000497984 MUC12Q9UKN1 5478 aa0.09□□□□□ -2.39
SMC4-227ENST00000497984 TRAV10A0A0B4J240 114 aa0.09□□□□□ -2.4
SMC4-227ENST00000497984 TRAV4A0A0B4J268 109 aa0.09□□□□□ -2.4
SMC4-227ENST00000497984 HAND1O96004 215 aa0.09□□□□□ -2.4
SMC4-227ENST00000497984 IGLV3-1P01715 115 aa0.09□□□□□ -2.4
SMC4-227ENST00000497984 SRP14P37108 136 aaKnown RBP0.09□□□□□ -2.4
SMC4-227ENST00000497984 SERPINB9P50453 376 aa0.09□□□□□ -2.4
SMC4-227ENST00000497984 PIGPP57054 158 aa0.09□□□□□ -2.4
SMC4-227ENST00000497984 KRR1Q13601 381 aaKnown RBP0.09□□□□□ -2.4
SMC4-227ENST00000497984 TMEM97Q5BJF2 176 aa0.09□□□□□ -2.4
SMC4-227ENST00000497984 HAGHLQ6PII5 290 aaPredicted RBP0.09□□□□□ -2.4
SMC4-227ENST00000497984 OR10K1Q8NGX5 313 aa0.09□□□□□ -2.4
SMC4-227ENST00000497984 Q8TAT8 98 aa0.09□□□□□ -2.4
SMC4-227ENST00000497984 LINC00467Q9BRT7 94 aa0.09□□□□□ -2.4
SMC4-227ENST00000497984 TNFSF18Q9UNG2 199 aa0.09□□□□□ -2.4
SMC4-227ENST00000497984 TNS3Q68CZ2 1445 aa0.09□□□□□ -2.4
SMC4-227ENST00000497984 CCDC88AQ3V6T2 1871 aa0.09□□□□□ -2.4
SMC4-227ENST00000497984 E7EUB6 86 aa0.08□□□□□ -2.4
SMC4-227ENST00000497984 K7EIL1 84 aa0.08□□□□□ -2.4
SMC4-227ENST00000497984 NDUFB3O43676 98 aa0.08□□□□□ -2.4
SMC4-227ENST00000497984 CEBPGP53567 150 aa0.08□□□□□ -2.4
SMC4-227ENST00000497984 RRN3P1Q2M238 152 aa0.08□□□□□ -2.4
SMC4-227ENST00000497984 SPINK9Q5DT21 86 aa0.08□□□□□ -2.4
SMC4-227ENST00000497984 C22orf39Q6P5X5 142 aa0.08□□□□□ -2.4
SMC4-227ENST00000497984 C2orf82Q6UX34 121 aa0.08□□□□□ -2.4
SMC4-227ENST00000497984 C4orf22Q6V702 233 aa0.08□□□□□ -2.4
SMC4-227ENST00000497984 OR5D14Q8NGL3 314 aa0.08□□□□□ -2.4
SMC4-227ENST00000497984 SLC25A21Q9BQT8 299 aaPredicted RBP0.08□□□□□ -2.4
SMC4-227ENST00000497984 PLB1Q6P1J6 1458 aa0.08□□□□□ -2.4
SMC4-227ENST00000497984 KIF13BQ9NQT8 1826 aa0.08□□□□□ -2.4
SMC4-227ENST00000497984 HEATR5AQ86XA9 2040 aa0.08□□□□□ -2.4
SMC4-227ENST00000497984 NCOA1Q15788 1441 aa0.07□□□□□ -2.4
SMC4-227ENST00000497984 CNTRLQ7Z7A1 2325 aa0.07□□□□□ -2.4
SMC4-227ENST00000497984 MCM3APO60318 1980 aa0.07□□□□□ -2.4
SMC4-227ENST00000497984 HIVEP1P15822 2718 aa0.07□□□□□ -2.4
SMC4-227ENST00000497984 TRGV10A0A0A0MS01 117 aa0.07□□□□□ -2.4
SMC4-227ENST00000497984 A8MWV9 139 aa0.07□□□□□ -2.4
SMC4-227ENST00000497984 ATP5G3P48201 142 aa0.07□□□□□ -2.4
SMC4-227ENST00000497984 DSCR4P56555 118 aaPredicted RBP0.07□□□□□ -2.4
SMC4-227ENST00000497984 LYRM7Q5U5X0 104 aa0.07□□□□□ -2.4
SMC4-227ENST00000497984 ZC2HC1AQ96GY0 325 aa0.07□□□□□ -2.4
SMC4-227ENST00000497984 PRAP1Q96NZ9 151 aa0.07□□□□□ -2.4
SMC4-227ENST00000497984 LYSMD1Q96S90 227 aa0.07□□□□□ -2.4
SMC4-227ENST00000497984 PARVGQ9HBI0 331 aa0.07□□□□□ -2.4
SMC4-227ENST00000497984 NIT2Q9NQR4 276 aa0.07□□□□□ -2.4
SMC4-227ENST00000497984 PLAC8Q9NZF1 115 aa0.07□□□□□ -2.4
SMC4-227ENST00000497984 CECR2Q9BXF3 1484 aa0.07□□□□□ -2.4
SMC4-227ENST00000497984 MAST4O15021 2626 aa0.07□□□□□ -2.4
SMC4-227ENST00000497984 ARHGEF11O15085 1522 aa0.07□□□□□ -2.4
SMC4-227ENST00000497984 FAT4Q6V0I7 4981 aa0.07□□□□□ -2.4
SMC4-227ENST00000497984 KDM6AO15550 1401 aaPredicted RBP0.06□□□□□ -2.4
SMC4-227ENST00000497984 RYR2Q92736 4967 aa0.06□□□□□ -2.4
SMC4-227ENST00000497984 TRBV19A0A075B6N1 114 aa0.06□□□□□ -2.4
SMC4-227ENST00000497984 IGLV3-32A0A0A0MS00 114 aa0.06□□□□□ -2.4
SMC4-227ENST00000497984 F8W1H4 67 aa0.06□□□□□ -2.4
SMC4-227ENST00000497984 IGLV1-51P01701 117 aa0.06□□□□□ -2.4
SMC4-227ENST00000497984 ERP29P30040 261 aaKnown RBP0.06□□□□□ -2.4
SMC4-227ENST00000497984 MYL6P60660 151 aa0.06□□□□□ -2.4
SMC4-227ENST00000497984 C1orf134Q5TEV5 83 aa0.06□□□□□ -2.4
SMC4-227ENST00000497984 PSMF1Q92530 271 aa0.06□□□□□ -2.4
SMC4-227ENST00000497984 YPEL2Q96QA6 119 aa0.06□□□□□ -2.4
SMC4-227ENST00000497984 SIGMAR1Q99720 223 aa0.06□□□□□ -2.4
SMC4-227ENST00000497984 GGACTQ9BVM4 153 aa0.06□□□□□ -2.4
SMC4-227ENST00000497984 PARVBQ9HBI1 364 aa0.06□□□□□ -2.4
SMC4-227ENST00000497984 TMEM138Q9NPI0 162 aa0.06□□□□□ -2.4
SMC4-227ENST00000497984 LY96Q9Y6Y9 160 aa0.06□□□□□ -2.4
SMC4-227ENST00000497984 ARHGEF28Q8N1W1 1705 aaKnown RBP0.06□□□□□ -2.4
SMC4-227ENST00000497984 RYR1P21817 5038 aa0.06□□□□□ -2.4
SMC4-227ENST00000497984 FMN1Q68DA7 1419 aa0.05□□□□□ -2.4
SMC4-227ENST00000497984 NAV2Q8IVL1 2488 aa0.05□□□□□ -2.4
SMC4-227ENST00000497984 H3BRM9 83 aa0.05□□□□□ -2.4
SMC4-227ENST00000497984 TAX1BP3O14907 124 aa0.05□□□□□ -2.4
SMC4-227ENST00000497984 ERC2-IT1O76042 136 aa0.05□□□□□ -2.4
SMC4-227ENST00000497984 OR7C1O76099 320 aaPredicted RBP0.05□□□□□ -2.4
SMC4-227ENST00000497984 CXCL8P10145 99 aa0.05□□□□□ -2.4
SMC4-227ENST00000497984 CDKN2CP42773 168 aa0.05□□□□□ -2.4
SMC4-227ENST00000497984 CCL7P80098 99 aa0.05□□□□□ -2.4
SMC4-227ENST00000497984 RGS21Q2M5E4 152 aa0.05□□□□□ -2.4
SMC4-227ENST00000497984 GLIPR1L1Q6UWM5 242 aa0.05□□□□□ -2.4
SMC4-227ENST00000497984 OTUD6BQ8N6M0 293 aa0.05□□□□□ -2.4
SMC4-227ENST00000497984 GNPDA2Q8TDQ7 276 aa0.05□□□□□ -2.4
SMC4-227ENST00000497984 RAB37Q96AX2 223 aa0.05□□□□□ -2.4
SMC4-227ENST00000497984 PPP1R14BQ96C90 147 aa0.05□□□□□ -2.4
SMC4-227ENST00000497984 CCDC94Q9BW85 323 aaPredicted RBP0.05□□□□□ -2.4
SMC4-227ENST00000497984 WFDC10AQ9H1F0 79 aa0.05□□□□□ -2.4
SMC4-227ENST00000497984 SBF1O95248 1867 aa0.05□□□□□ -2.4
SMC4-227ENST00000497984 RFX7Q2KHR2 1363 aa0.05□□□□□ -2.4
SMC4-227ENST00000497984 EML5Q05BV3 1969 aa0.05□□□□□ -2.4
SMC4-227ENST00000497984 FRAS1Q86XX4 4008 aa0.04□□□□□ -2.4
SMC4-227ENST00000497984 A0A087WSZ3 146 aa0.04□□□□□ -2.4
SMC4-227ENST00000497984 FAM159BA6NKW6 160 aa0.04□□□□□ -2.4
SMC4-227ENST00000497984 TMEM114B3SHH9 223 aa0.04□□□□□ -2.4
SMC4-227ENST00000497984 TMEM256-PLSCR3K7ERE1 68 aa0.04□□□□□ -2.4
SMC4-227ENST00000497984 CYBAP13498 195 aa0.04□□□□□ -2.4
SMC4-227ENST00000497984 COX7CP15954 63 aa0.04□□□□□ -2.4
SMC4-227ENST00000497984 FOXA3P55318 350 aaPredicted RBP0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 329.2 ms