RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 HYPMO75409 117 aa8.99□□□□□ -0.97
CUX1-210ENST00000497815 BMI1P35226 326 aa8.99□□□□□ -0.97
CUX1-210ENST00000497815 RPL29P47914 159 aaKnown RBP8.99□□□□□ -0.97
CUX1-210ENST00000497815 B2MP61769 119 aa8.99□□□□□ -0.97
CUX1-210ENST00000497815 RPL11P62913 178 aaKnown RBP8.99□□□□□ -0.97
CUX1-210ENST00000497815 PRR20EP86478 221 aa8.99□□□□□ -0.97
CUX1-210ENST00000497815 PRR20CP86479 221 aa8.99□□□□□ -0.97
CUX1-210ENST00000497815 PRR20DP86480 221 aa8.99□□□□□ -0.97
CUX1-210ENST00000497815 PRR20BP86481 221 aa8.99□□□□□ -0.97
CUX1-210ENST00000497815 PRR20AP86496 221 aa8.99□□□□□ -0.97
CUX1-210ENST00000497815 ZNF266Q14584 549 aa8.99□□□□□ -0.97
CUX1-210ENST00000497815 ZFP69Q49AA0 526 aa8.99□□□□□ -0.97
CUX1-210ENST00000497815 RPL7L1Q6DKI1 246 aaKnown RBP8.99□□□□□ -0.97
CUX1-210ENST00000497815 Q6ZRG5 221 aa8.99□□□□□ -0.97
CUX1-210ENST00000497815 KCNRGQ8N5I3 272 aa8.99□□□□□ -0.97
CUX1-210ENST00000497815 HSD17B11Q8NBQ5 300 aa8.99□□□□□ -0.97
CUX1-210ENST00000497815 GRAMD2BQ96HH9 432 aa8.99□□□□□ -0.97
CUX1-210ENST00000497815 UHRF2Q96PU4 802 aa8.99□□□□□ -0.97
CUX1-210ENST00000497815 TECRQ9NZ01 308 aaKnown RBP8.99□□□□□ -0.97
CUX1-210ENST00000497815 HIGD1AQ9Y241 93 aa8.99□□□□□ -0.97
CUX1-210ENST00000497815 RFNGQ9Y644 331 aa8.99□□□□□ -0.97
CUX1-210ENST00000497815 BORCS7-ASMTA0A0B4J1R7 106 aa8.98□□□□□ -0.97
CUX1-210ENST00000497815 A0A1W2PS18 150 aa8.98□□□□□ -0.97
CUX1-210ENST00000497815 PFDN1O60925 122 aa8.98□□□□□ -0.97
CUX1-210ENST00000497815 KRTAP10-11P60412 298 aa8.98□□□□□ -0.97
CUX1-210ENST00000497815 ZNF345Q14585 488 aa8.98□□□□□ -0.97
CUX1-210ENST00000497815 GUCA2BQ16661 112 aa8.98□□□□□ -0.97
CUX1-210ENST00000497815 LEMD1Q68G75 181 aa8.98□□□□□ -0.97
CUX1-210ENST00000497815 PATE2Q6UY27 113 aa8.98□□□□□ -0.97
CUX1-210ENST00000497815 RBPMS2Q6ZRY4 209 aaKnown RBP8.98□□□□□ -0.97
CUX1-210ENST00000497815 TCF24Q7RTU0 167 aa8.98□□□□□ -0.97
CUX1-210ENST00000497815 TMEM61Q8N0U2 210 aa8.98□□□□□ -0.97
CUX1-210ENST00000497815 ARPC5LQ9BPX5 153 aa8.98□□□□□ -0.97
CUX1-210ENST00000497815 ARV1Q9H2C2 271 aa8.98□□□□□ -0.97
CUX1-210ENST00000497815 TMEM231Q9H6L2 316 aa8.98□□□□□ -0.97
CUX1-210ENST00000497815 VSIRQ9H7M9 311 aa8.98□□□□□ -0.97
CUX1-210ENST00000497815 SLC25A22Q9H936 323 aa8.98□□□□□ -0.97
CUX1-210ENST00000497815 KCNIP2Q9NS61 270 aa8.98□□□□□ -0.97
CUX1-210ENST00000497815 PFDN2Q9UHV9 154 aa8.98□□□□□ -0.97
CUX1-210ENST00000497815 U3KQE9 123 aa8.98□□□□□ -0.97
CUX1-210ENST00000497815 A0A0D9SG52 128 aa8.97□□□□□ -0.97
CUX1-210ENST00000497815 KANTRA0A1W2PQU2 76 aa8.97□□□□□ -0.97
CUX1-210ENST00000497815 TAAR5O14804 337 aa8.97□□□□□ -0.97
CUX1-210ENST00000497815 WIPF1O43516 503 aa8.97□□□□□ -0.97
CUX1-210ENST00000497815 BUB3O43684 328 aa8.97□□□□□ -0.97
CUX1-210ENST00000497815 PRB2P02812 416 aaPredicted RBP8.97□□□□□ -0.97
CUX1-210ENST00000497815 TFPI2P48307 235 aa8.97□□□□□ -0.97
CUX1-210ENST00000497815 PLP1P60201 277 aa8.97□□□□□ -0.97
CUX1-210ENST00000497815 BEAN1Q3B7T3 259 aa8.97□□□□□ -0.97
CUX1-210ENST00000497815 GCSAMLQ5JQS6 135 aa8.97□□□□□ -0.97
CUX1-210ENST00000497815 FFAR4Q5NUL3 377 aa8.97□□□□□ -0.97
CUX1-210ENST00000497815 PXDC1Q5TGL8 231 aa8.97□□□□□ -0.97
CUX1-210ENST00000497815 C10orf113Q5VZT2 155 aa8.97□□□□□ -0.97
CUX1-210ENST00000497815 LAMTOR1Q6IAA8 161 aa8.97□□□□□ -0.97
CUX1-210ENST00000497815 LCN12Q6JVE5 192 aa8.97□□□□□ -0.97
CUX1-210ENST00000497815 C16orf54Q6UWD8 224 aa8.97□□□□□ -0.97
CUX1-210ENST00000497815 TMUB2Q71RG4 321 aa8.97□□□□□ -0.97
CUX1-210ENST00000497815 GBGT1Q8N5D6 347 aa8.97□□□□□ -0.97
CUX1-210ENST00000497815 HYLS1Q96M11 299 aa8.97□□□□□ -0.97
CUX1-210ENST00000497815 SCRT1Q9BWW7 348 aa8.97□□□□□ -0.97
CUX1-210ENST00000497815 PARD6GQ9BYG4 376 aaPredicted RBP8.97□□□□□ -0.97
CUX1-210ENST00000497815 SLC25A39Q9BZJ4 359 aaPredicted RBP8.97□□□□□ -0.97
CUX1-210ENST00000497815 PKD1L1Q8TDX9 2849 aa8.96□□□□□ -0.97
CUX1-210ENST00000497815 ZNF98A6NK75 572 aa8.96□□□□□ -0.98
CUX1-210ENST00000497815 BCL2L11O43521 198 aa8.96□□□□□ -0.98
CUX1-210ENST00000497815 ATP6V0CP27449 155 aa8.96□□□□□ -0.98
CUX1-210ENST00000497815 LGALSLQ3ZCW2 172 aaPredicted RBP8.96□□□□□ -0.98
CUX1-210ENST00000497815 LINC00305Q7Z4B0 112 aa8.96□□□□□ -0.98
CUX1-210ENST00000497815 OR1L4Q8NGR5 311 aa8.96□□□□□ -0.98
CUX1-210ENST00000497815 OR2K2Q8NGT1 345 aa8.96□□□□□ -0.98
CUX1-210ENST00000497815 TMEM37Q8WXS4 190 aa8.96□□□□□ -0.98
CUX1-210ENST00000497815 PRR25Q96S07 402 aa8.96□□□□□ -0.98
CUX1-210ENST00000497815 SHANK2-AS3Q9BTD1 123 aa8.96□□□□□ -0.98
CUX1-210ENST00000497815 SH3BGRL3Q9H299 93 aa8.96□□□□□ -0.98
CUX1-210ENST00000497815 DNAJC4Q9NNZ3 241 aa8.96□□□□□ -0.98
CUX1-210ENST00000497815 CYTL1Q9NRR1 136 aa8.96□□□□□ -0.98
CUX1-210ENST00000497815 ZNF256Q9Y2P7 627 aaPredicted RBP8.96□□□□□ -0.98
CUX1-210ENST00000497815 ELOA3CA0A087WX78 387 aaPredicted RBP8.95□□□□□ -0.98
CUX1-210ENST00000497815 H3BRN7 92 aa8.95□□□□□ -0.98
CUX1-210ENST00000497815 JTBO76095 146 aa8.95□□□□□ -0.98
CUX1-210ENST00000497815 GP9P14770 177 aa8.95□□□□□ -0.98
CUX1-210ENST00000497815 S100A7P31151 101 aa8.95□□□□□ -0.98
CUX1-210ENST00000497815 NKX2-5P52952 324 aaPredicted RBP8.95□□□□□ -0.98
CUX1-210ENST00000497815 EGFEM1PQ0D2K5 195 aa8.95□□□□□ -0.98
CUX1-210ENST00000497815 MORN5Q5VZ52 161 aa8.95□□□□□ -0.98
CUX1-210ENST00000497815 FAM90A2PQ658T7 463 aa8.95□□□□□ -0.98
CUX1-210ENST00000497815 S100A7AQ86SG5 101 aa8.95□□□□□ -0.98
CUX1-210ENST00000497815 WFDC3Q8IUB2 231 aa8.95□□□□□ -0.98
CUX1-210ENST00000497815 OR8I2Q8N0Y5 310 aa8.95□□□□□ -0.98
CUX1-210ENST00000497815 GLMPQ8WWB7 406 aa8.95□□□□□ -0.98
CUX1-210ENST00000497815 PFDN5Q99471 154 aa8.95□□□□□ -0.98
CUX1-210ENST00000497815 ZNF471Q9BX82 626 aaPredicted RBP8.95□□□□□ -0.98
CUX1-210ENST00000497815 SLC25A32Q9H2D1 315 aa8.95□□□□□ -0.98
CUX1-210ENST00000497815 TIMM9Q9Y5J7 89 aa8.95□□□□□ -0.98
CUX1-210ENST00000497815 TRAV5A0A0B4J249 113 aa8.94□□□□□ -0.98
CUX1-210ENST00000497815 TRAV25A0A0B4J276 109 aa8.94□□□□□ -0.98
CUX1-210ENST00000497815 HELTA6NFD8 242 aa8.94□□□□□ -0.98
CUX1-210ENST00000497815 ZNF785A8K8V0 405 aa8.94□□□□□ -0.98
CUX1-210ENST00000497815 TSPAN4O14817 238 aa8.94□□□□□ -0.98
CUX1-210ENST00000497815 C1orf194Q5T5A4 169 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms