RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 UBE2L3P68036 154 aaKnown RBP8.05□□□□□ -1.12
HDAC3-214ENST00000495485 ZNF674Q2M3X9 581 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 TIGITQ495A1 244 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 ASPHD1Q5U4P2 390 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 FAM90A2PQ658T7 463 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 Q6YL49 198 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 C15orf54Q8N8G6 183 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-214ENST00000495485 PIFOQ8TCI5 191 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 FANCD2OSQ96PS1 177 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 HSPB9Q9BQS6 159 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 CTDSP1Q9GZU7 261 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 SDF2L1Q9HCN8 221 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 DOK5Q9P104 306 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 ANK2Q01484 3957 aa8.04□□□□□ -1.12
HDAC3-214ENST00000495485 TRBV9A0A0B4J1U6 114 aa8.04□□□□□ -1.12
HDAC3-214ENST00000495485 A0A0G2JLM5 398 aa8.04□□□□□ -1.12
HDAC3-214ENST00000495485 FAM74A7A6NL05 159 aa8.04□□□□□ -1.12
HDAC3-214ENST00000495485 OR2J3O76001 311 aa8.04□□□□□ -1.12
HDAC3-214ENST00000495485 IGHG2P01859 326 aa8.04□□□□□ -1.12
HDAC3-214ENST00000495485 NDPQ00604 133 aa8.04□□□□□ -1.12
HDAC3-214ENST00000495485 RELQ04864 619 aaPredicted RBP8.04□□□□□ -1.12
HDAC3-214ENST00000495485 ATP5G2Q06055 141 aa8.04□□□□□ -1.12
HDAC3-214ENST00000495485 LY6EQ16553 131 aa8.04□□□□□ -1.12
HDAC3-214ENST00000495485 SPATA31B1PQ5VZV4 182 aa8.04□□□□□ -1.12
HDAC3-214ENST00000495485 ATRAIDQ6UW56 229 aa8.04□□□□□ -1.12
HDAC3-214ENST00000495485 TMEM219Q86XT9 240 aa8.04□□□□□ -1.12
HDAC3-214ENST00000495485 BPIFA4PQ86YQ2 179 aa8.04□□□□□ -1.12
HDAC3-214ENST00000495485 TMEM158Q8WZ71 300 aa8.04□□□□□ -1.12
HDAC3-214ENST00000495485 USMG5Q96IX5 58 aa8.04□□□□□ -1.12
HDAC3-214ENST00000495485 PARLQ9H300 379 aa8.04□□□□□ -1.12
HDAC3-214ENST00000495485 TMEM242Q9NWH2 141 aa8.04□□□□□ -1.12
HDAC3-214ENST00000495485 MRPL36Q9P0J6 103 aaKnown RBP8.04□□□□□ -1.12
HDAC3-214ENST00000495485 MRPL27Q9P0M9 148 aaKnown RBP8.04□□□□□ -1.12
HDAC3-214ENST00000495485 ZNF580Q9UK33 172 aa8.04□□□□□ -1.12
HDAC3-214ENST00000495485 DMRT1Q9Y5R6 373 aa8.04□□□□□ -1.12
HDAC3-214ENST00000495485 WI2-2373I1.2A0A1W2PRP0 233 aa8.03□□□□□ -1.12
HDAC3-214ENST00000495485 DNASE2O00115 360 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-214ENST00000495485 BMPR1BO00238 502 aa8.03□□□□□ -1.12
HDAC3-214ENST00000495485 TSPAN4O14817 238 aa8.03□□□□□ -1.12
HDAC3-214ENST00000495485 PPP1R2P9O14990 202 aa8.03□□□□□ -1.12
HDAC3-214ENST00000495485 NDUFB8O95169 186 aa8.03□□□□□ -1.12
HDAC3-214ENST00000495485 OR2C1O95371 312 aa8.03□□□□□ -1.12
HDAC3-214ENST00000495485 S100A9P06702 114 aaKnown RBP8.03□□□□□ -1.12
HDAC3-214ENST00000495485 RNASE1P07998 156 aaKnown RBP8.03□□□□□ -1.12
HDAC3-214ENST00000495485 RHOGP84095 191 aa8.03□□□□□ -1.12
HDAC3-214ENST00000495485 C15orf32Q32M92 178 aa8.03□□□□□ -1.12
HDAC3-214ENST00000495485 PATE2Q6UY27 113 aa8.03□□□□□ -1.12
HDAC3-214ENST00000495485 ZNF600Q6ZNG1 722 aa8.03□□□□□ -1.12
HDAC3-214ENST00000495485 OR4F17Q8NGA8 305 aa8.03□□□□□ -1.12
HDAC3-214ENST00000495485 ANAPC16Q96DE5 110 aa8.03□□□□□ -1.12
HDAC3-214ENST00000495485 RNF125Q96EQ8 232 aa8.03□□□□□ -1.12
HDAC3-214ENST00000495485 BTF3L4Q96K17 158 aa8.03□□□□□ -1.12
HDAC3-214ENST00000495485 SLC25A2Q9BXI2 301 aa8.03□□□□□ -1.12
HDAC3-214ENST00000495485 SLC25A39Q9BZJ4 359 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-214ENST00000495485 TMEM14CQ9P0S9 112 aa8.03□□□□□ -1.12
HDAC3-214ENST00000495485 LY96Q9Y6Y9 160 aa8.03□□□□□ -1.12
HDAC3-214ENST00000495485 FBN1P35555 2871 aaKnown RBP8.02□□□□□ -1.13
HDAC3-214ENST00000495485 A0A1B0GUS0 222 aa8.02□□□□□ -1.13
HDAC3-214ENST00000495485 HELTA6NFD8 242 aa8.02□□□□□ -1.13
HDAC3-214ENST00000495485 EIF3GO75821 320 aaKnown RBP eCLIP8.02□□□□□ -1.13
HDAC3-214ENST00000495485 IGKV1-17P01599 117 aa8.02□□□□□ -1.13
HDAC3-214ENST00000495485 IL4P05112 153 aa8.02□□□□□ -1.13
HDAC3-214ENST00000495485 S100PP25815 95 aa8.02□□□□□ -1.13
HDAC3-214ENST00000495485 IER3P46695 156 aa8.02□□□□□ -1.13
HDAC3-214ENST00000495485 ATP5G3P48201 142 aa8.02□□□□□ -1.13
HDAC3-214ENST00000495485 SUMO1P63165 101 aaKnown RBP8.02□□□□□ -1.13
HDAC3-214ENST00000495485 DEFB112Q30KQ8 113 aa8.02□□□□□ -1.13
HDAC3-214ENST00000495485 FBLN7Q53RD9 439 aa8.02□□□□□ -1.13
HDAC3-214ENST00000495485 C19orf35Q6ZS72 473 aa8.02□□□□□ -1.13
HDAC3-214ENST00000495485 LYPD1Q8N2G4 141 aa8.02□□□□□ -1.13
HDAC3-214ENST00000495485 SIGLECL1Q8N7X8 197 aa8.02□□□□□ -1.13
HDAC3-214ENST00000495485 ZNF491Q8N8L2 437 aa8.02□□□□□ -1.13
HDAC3-214ENST00000495485 C11orf52Q96A22 123 aa8.02□□□□□ -1.13
HDAC3-214ENST00000495485 FAM167A-AS1Q96KT0 104 aa8.02□□□□□ -1.13
HDAC3-214ENST00000495485 C20orf24Q9BUV8 137 aa8.02□□□□□ -1.13
HDAC3-214ENST00000495485 PRSS22Q9GZN4 317 aa8.02□□□□□ -1.13
HDAC3-214ENST00000495485 RABAC1Q9UI14 185 aa8.02□□□□□ -1.13
HDAC3-214ENST00000495485 TMEM89A2RUT3 159 aa8.01□□□□□ -1.13
HDAC3-214ENST00000495485 NDUFB4O95168 129 aa8.01□□□□□ -1.13
HDAC3-214ENST00000495485 TRGV3P03979 118 aa8.01□□□□□ -1.13
HDAC3-214ENST00000495485 OR10J4P0C629 311 aa8.01□□□□□ -1.13
HDAC3-214ENST00000495485 NBEAP1P0C6P0 100 aa8.01□□□□□ -1.13
HDAC3-214ENST00000495485 HIST1H1EP10412 219 aaKnown RBP8.01□□□□□ -1.13
HDAC3-214ENST00000495485 TAS2R60P59551 318 aa8.01□□□□□ -1.13
HDAC3-214ENST00000495485 SLC35B1P78383 322 aa8.01□□□□□ -1.13
HDAC3-214ENST00000495485 ADIRFQ15847 76 aa8.01□□□□□ -1.13
HDAC3-214ENST00000495485 ZNF502Q8TBZ5 544 aa8.01□□□□□ -1.13
HDAC3-214ENST00000495485 HIST1H2BAQ96A08 127 aa8.01□□□□□ -1.13
HDAC3-214ENST00000495485 GPR82Q96P67 336 aa8.01□□□□□ -1.13
HDAC3-214ENST00000495485 OR5B12Q96R08 314 aa8.01□□□□□ -1.13
HDAC3-214ENST00000495485 SHANK2-AS3Q9BTD1 123 aa8.01□□□□□ -1.13
HDAC3-214ENST00000495485 VPREB3Q9UKI3 123 aa8.01□□□□□ -1.13
HDAC3-214ENST00000495485 YTHDF2Q9Y5A9 579 aaKnown RBP8.01□□□□□ -1.13
HDAC3-214ENST00000495485 TRAV5A0A0B4J249 113 aa8□□□□□ -1.13
HDAC3-214ENST00000495485 MDFIC2A0A1B0GVS7 189 aa8□□□□□ -1.13
HDAC3-214ENST00000495485 OR2T8A6NH00 312 aa8□□□□□ -1.13
HDAC3-214ENST00000495485 DNAJC9-AS1A6NH13 148 aa8□□□□□ -1.13
HDAC3-214ENST00000495485 C9JCJ5 164 aa8□□□□□ -1.13
HDAC3-214ENST00000495485 G3V318 75 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms