RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 TGP01266 2768 aa8.32□□□□□ -1.08
APTX-230ENST00000494649 FXYD6-FXYD2A0A087WZ82 144 aa8.31□□□□□ -1.08
APTX-230ENST00000494649 A0A1W2PS18 150 aa8.31□□□□□ -1.08
APTX-230ENST00000494649 OR11H12B2RN74 326 aa8.31□□□□□ -1.08
APTX-230ENST00000494649 DNASE2O00115 360 aaPredicted RBP8.31□□□□□ -1.08
APTX-230ENST00000494649 BUB3O43684 328 aa8.31□□□□□ -1.08
APTX-230ENST00000494649 SNRPCP09234 159 aaKnown RBP8.31□□□□□ -1.08
APTX-230ENST00000494649 GIPP09681 153 aaPredicted RBP8.31□□□□□ -1.08
APTX-230ENST00000494649 EIF2B2P49770 351 aaKnown RBP8.31□□□□□ -1.08
APTX-230ENST00000494649 AP2S1P53680 142 aaPredicted RBP8.31□□□□□ -1.08
APTX-230ENST00000494649 APRG1Q8IVJ8 170 aa8.31□□□□□ -1.08
APTX-230ENST00000494649 SPAG8Q99932 426 aaPredicted RBP8.31□□□□□ -1.08
APTX-230ENST00000494649 GGACTQ9BVM4 153 aa8.31□□□□□ -1.08
APTX-230ENST00000494649 SCRT1Q9BWW7 348 aa8.31□□□□□ -1.08
APTX-230ENST00000494649 FRMD6-AS1P0C7T7 363 aa8.31□□□□□ -1.08
APTX-230ENST00000494649 BMI1P35226 326 aa8.31□□□□□ -1.08
APTX-230ENST00000494649 GLMPQ8WWB7 406 aa8.31□□□□□ -1.08
APTX-230ENST00000494649 GRAMD2BQ96HH9 432 aa8.31□□□□□ -1.08
APTX-230ENST00000494649 GGTLC1Q9BX51 225 aa8.31□□□□□ -1.08
APTX-230ENST00000494649 WDR83OSQ9Y284 106 aa8.31□□□□□ -1.08
APTX-230ENST00000494649 U3KQE9 123 aa8.31□□□□□ -1.08
APTX-230ENST00000494649 FNDC10F2Z333 226 aa8.3□□□□□ -1.08
APTX-230ENST00000494649 VWC2Q2TAL6 325 aa8.3□□□□□ -1.08
APTX-230ENST00000494649 C16orf54Q6UWD8 224 aa8.3□□□□□ -1.08
APTX-230ENST00000494649 SIGLEC15Q6ZMC9 328 aa8.3□□□□□ -1.08
APTX-230ENST00000494649 TMEM231Q9H6L2 316 aa8.3□□□□□ -1.08
APTX-230ENST00000494649 TUBA4BQ9H853 241 aa8.3□□□□□ -1.08
APTX-230ENST00000494649 SLC45A2Q9UMX9 530 aa8.3□□□□□ -1.08
APTX-230ENST00000494649 HSPB11Q9Y547 144 aa8.3□□□□□ -1.08
APTX-230ENST00000494649 RFNGQ9Y644 331 aa8.3□□□□□ -1.08
APTX-230ENST00000494649 TRAV25A0A0B4J276 109 aa8.3□□□□□ -1.08
APTX-230ENST00000494649 PRB4P10163 310 aaPredicted RBP8.3□□□□□ -1.08
APTX-230ENST00000494649 ODF3L2Q3SX64 289 aa8.3□□□□□ -1.08
APTX-230ENST00000494649 PATE2Q6UY27 113 aa8.3□□□□□ -1.08
APTX-230ENST00000494649 ZNF546Q86UE3 836 aa8.3□□□□□ -1.08
APTX-230ENST00000494649 OR8I2Q8N0Y5 310 aa8.3□□□□□ -1.08
APTX-230ENST00000494649 CITED4Q96RK1 184 aa8.3□□□□□ -1.08
APTX-230ENST00000494649 ARV1Q9H2C2 271 aa8.3□□□□□ -1.08
APTX-230ENST00000494649 SRD5A3Q9H8P0 318 aa8.3□□□□□ -1.08
APTX-230ENST00000494649 WFDC1Q9HC57 220 aa8.3□□□□□ -1.08
APTX-230ENST00000494649 OR4C46A6NHA9 309 aa8.29□□□□□ -1.08
APTX-230ENST00000494649 ZNF98A6NK75 572 aa8.29□□□□□ -1.08
APTX-230ENST00000494649 G3V3Q6 166 aa8.29□□□□□ -1.08
APTX-230ENST00000494649 HYPMO75409 117 aa8.29□□□□□ -1.08
APTX-230ENST00000494649 ZNF688P0C7X2 276 aa8.29□□□□□ -1.08
APTX-230ENST00000494649 RAP2BP61225 183 aa8.29□□□□□ -1.08
APTX-230ENST00000494649 PAFAH1B2P68402 229 aa8.29□□□□□ -1.08
APTX-230ENST00000494649 FGL1Q08830 312 aa8.29□□□□□ -1.08
APTX-230ENST00000494649 GCSAMLQ5JQS6 135 aa8.29□□□□□ -1.08
APTX-230ENST00000494649 MORN5Q5VZ52 161 aa8.29□□□□□ -1.08
APTX-230ENST00000494649 RSG1Q9BU20 258 aa8.29□□□□□ -1.08
APTX-230ENST00000494649 NPCDR1Q9BY65 106 aa8.29□□□□□ -1.08
APTX-230ENST00000494649 SLC25A39Q9BZJ4 359 aaPredicted RBP8.29□□□□□ -1.08
APTX-230ENST00000494649 C19orf73Q9NVV2 129 aa8.29□□□□□ -1.08
APTX-230ENST00000494649 HIGD1AQ9Y241 93 aa8.29□□□□□ -1.08
APTX-230ENST00000494649 COX7A2P2O60397 106 aa8.28□□□□□ -1.08
APTX-230ENST00000494649 LYL1P12980 280 aa8.28□□□□□ -1.08
APTX-230ENST00000494649 B2MP61769 119 aa8.28□□□□□ -1.08
APTX-230ENST00000494649 SELENOTP62341 195 aa8.28□□□□□ -1.08
APTX-230ENST00000494649 RAB31Q13636 194 aa8.28□□□□□ -1.08
APTX-230ENST00000494649 ATP6V1FQ16864 119 aa8.28□□□□□ -1.08
APTX-230ENST00000494649 SBSPONQ8IVN8 264 aa8.28□□□□□ -1.08
APTX-230ENST00000494649 TMEM37Q8WXS4 190 aa8.28□□□□□ -1.08
APTX-230ENST00000494649 ATP5SQ99766 215 aa8.28□□□□□ -1.08
APTX-230ENST00000494649 SLC25A32Q9H2D1 315 aa8.28□□□□□ -1.08
APTX-230ENST00000494649 FBXL17Q9UF56 701 aa8.28□□□□□ -1.08
APTX-230ENST00000494649 PXMP4Q9Y6I8 212 aa8.28□□□□□ -1.08
APTX-230ENST00000494649 DEFB131AP59861 70 aa8.28□□□□□ -1.08
APTX-230ENST00000494649 DEFB1P60022 68 aa8.28□□□□□ -1.08
APTX-230ENST00000494649 LINC00305Q7Z4B0 112 aa8.28□□□□□ -1.08
APTX-230ENST00000494649 WDR61Q9GZS3 305 aaKnown RBP8.28□□□□□ -1.08
APTX-230ENST00000494649 MAP6D1Q9H9H5 199 aa8.28□□□□□ -1.08
APTX-230ENST00000494649 TRAV5A0A0B4J249 113 aa8.27□□□□□ -1.09
APTX-230ENST00000494649 HELTA6NFD8 242 aa8.27□□□□□ -1.09
APTX-230ENST00000494649 H3BRN7 92 aa8.27□□□□□ -1.09
APTX-230ENST00000494649 ARPC5O15511 151 aa8.27□□□□□ -1.09
APTX-230ENST00000494649 EIF3GO75821 320 aaKnown RBP eCLIP8.27□□□□□ -1.09
APTX-230ENST00000494649 CFDP00746 253 aaPredicted RBP8.27□□□□□ -1.09
APTX-230ENST00000494649 PRR20EP86478 221 aa8.27□□□□□ -1.09
APTX-230ENST00000494649 PRR20CP86479 221 aa8.27□□□□□ -1.09
APTX-230ENST00000494649 PRR20DP86480 221 aa8.27□□□□□ -1.09
APTX-230ENST00000494649 PRR20BP86481 221 aa8.27□□□□□ -1.09
APTX-230ENST00000494649 PRR20AP86496 221 aa8.27□□□□□ -1.09
APTX-230ENST00000494649 OPCMLQ14982 345 aa8.27□□□□□ -1.09
APTX-230ENST00000494649 IGFL4Q6B9Z1 124 aa8.27□□□□□ -1.09
APTX-230ENST00000494649 Q6ZRG5 221 aa8.27□□□□□ -1.09
APTX-230ENST00000494649 DCANP1Q8TF63 244 aa8.27□□□□□ -1.09
APTX-230ENST00000494649 SLC39A9Q9NUM3 307 aa8.27□□□□□ -1.09
APTX-230ENST00000494649 COL7A1Q02388 2944 aa8.27□□□□□ -1.09
APTX-230ENST00000494649 A0A1B0GVG6 124 aa8.26□□□□□ -1.09
APTX-230ENST00000494649 RBMY1BA6NDE4 496 aaKnown RBP8.26□□□□□ -1.09
APTX-230ENST00000494649 RBMY1EA6NEQ0 496 aaKnown RBP8.26□□□□□ -1.09
APTX-230ENST00000494649 H3BTX0 84 aa8.26□□□□□ -1.09
APTX-230ENST00000494649 RBMY1DP0C7P1 496 aaKnown RBP8.26□□□□□ -1.09
APTX-230ENST00000494649 RPL35AP18077 110 aaKnown RBP8.26□□□□□ -1.09
APTX-230ENST00000494649 PSMG4Q5JS54 123 aa8.26□□□□□ -1.09
APTX-230ENST00000494649 C10orf113Q5VZT2 155 aa8.26□□□□□ -1.09
APTX-230ENST00000494649 Q6ZNX1 250 aa8.26□□□□□ -1.09
APTX-230ENST00000494649 SHANK2-AS3Q9BTD1 123 aa8.26□□□□□ -1.09
APTX-230ENST00000494649 NRN1Q9NPD7 142 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms