RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 ZNF492Q9P255 531 aa12.84□□□□□ -0.35
SEMA4D-220ENST00000492386 A6NNC1 897 aa12.83□□□□□ -0.36
SEMA4D-220ENST00000492386 B9A039 149 aa12.83□□□□□ -0.36
SEMA4D-220ENST00000492386 IGLC1P0CG04 106 aa12.83□□□□□ -0.36
SEMA4D-220ENST00000492386 PSG1P11464 419 aa12.83□□□□□ -0.36
SEMA4D-220ENST00000492386 ZNF25P17030 456 aaPredicted RBP12.83□□□□□ -0.36
SEMA4D-220ENST00000492386 MMDQ15546 238 aa12.83□□□□□ -0.36
SEMA4D-220ENST00000492386 CT83Q5H943 113 aa12.83□□□□□ -0.36
SEMA4D-220ENST00000492386 FBXL15Q9H469 300 aa12.83□□□□□ -0.36
SEMA4D-220ENST00000492386 HIGD1AQ9Y241 93 aa12.83□□□□□ -0.36
SEMA4D-220ENST00000492386 HSBP1O75506 76 aa12.83□□□□□ -0.36
SEMA4D-220ENST00000492386 IGLC2P0DOY2 106 aa12.83□□□□□ -0.36
SEMA4D-220ENST00000492386 IGLC3P0DOY3 106 aa12.83□□□□□ -0.36
SEMA4D-220ENST00000492386 PRR31Q5SQ13 230 aa12.83□□□□□ -0.36
SEMA4D-220ENST00000492386 ABCA1O95477 2261 aa12.82□□□□□ -0.36
SEMA4D-220ENST00000492386 FAM181BA6NEQ2 426 aa12.82□□□□□ -0.36
SEMA4D-220ENST00000492386 I3L2K1 104 aa12.82□□□□□ -0.36
SEMA4D-220ENST00000492386 HBBP68871 147 aa12.82□□□□□ -0.36
SEMA4D-220ENST00000492386 LCN12Q6JVE5 192 aa12.82□□□□□ -0.36
SEMA4D-220ENST00000492386 OR2D3Q8NGH3 330 aa12.82□□□□□ -0.36
SEMA4D-220ENST00000492386 SRSF12Q8WXF0 261 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-220ENST00000492386 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.81□□□□□ -0.36
SEMA4D-220ENST00000492386 A8MWL6 223 aa12.81□□□□□ -0.36
SEMA4D-220ENST00000492386 P01737 135 aa12.81□□□□□ -0.36
SEMA4D-220ENST00000492386 COX7A1P24310 79 aa12.81□□□□□ -0.36
SEMA4D-220ENST00000492386 LYZP61626 148 aa12.81□□□□□ -0.36
SEMA4D-220ENST00000492386 RNASEKQ6P5S7 137 aaKnown RBP12.81□□□□□ -0.36
SEMA4D-220ENST00000492386 URB1-AS1Q96HZ7 61 aa12.81□□□□□ -0.36
SEMA4D-220ENST00000492386 UQCR10Q9UDW1 63 aa12.81□□□□□ -0.36
SEMA4D-220ENST00000492386 CD3EP07766 207 aa12.81□□□□□ -0.36
SEMA4D-220ENST00000492386 EBLN2Q6P2I7 272 aa12.81□□□□□ -0.36
SEMA4D-220ENST00000492386 SLC25A39Q9BZJ4 359 aaPredicted RBP12.81□□□□□ -0.36
SEMA4D-220ENST00000492386 OTORQ9NRC9 128 aa12.81□□□□□ -0.36
SEMA4D-220ENST00000492386 TMEM14CQ9P0S9 112 aa12.81□□□□□ -0.36
SEMA4D-220ENST00000492386 M0R2Z0 102 aa12.8□□□□□ -0.36
SEMA4D-220ENST00000492386 RBPJQ06330 500 aa12.8□□□□□ -0.36
SEMA4D-220ENST00000492386 BATFQ16520 125 aa12.8□□□□□ -0.36
SEMA4D-220ENST00000492386 OR8B3Q8NGG8 313 aa12.8□□□□□ -0.36
SEMA4D-220ENST00000492386 OR8B2Q96RD0 313 aa12.8□□□□□ -0.36
SEMA4D-220ENST00000492386 TMEM208Q9BTX3 173 aa12.8□□□□□ -0.36
SEMA4D-220ENST00000492386 LPAR2Q9HBW0 351 aa12.8□□□□□ -0.36
SEMA4D-220ENST00000492386 PPIAL4CA0A0B4J2A2 164 aa12.8□□□□□ -0.36
SEMA4D-220ENST00000492386 LY6LH3BQJ8 138 aa12.8□□□□□ -0.36
SEMA4D-220ENST00000492386 IGLV2-11P01706 119 aa12.8□□□□□ -0.36
SEMA4D-220ENST00000492386 PPIAL4GP0DN37 164 aa12.8□□□□□ -0.36
SEMA4D-220ENST00000492386 Q86TA4 180 aa12.8□□□□□ -0.36
SEMA4D-220ENST00000492386 ATOH7Q8N100 152 aa12.8□□□□□ -0.36
SEMA4D-220ENST00000492386 RPEQ96AT9 228 aa12.8□□□□□ -0.36
SEMA4D-220ENST00000492386 PGLYRP4Q96LB8 373 aa12.8□□□□□ -0.36
SEMA4D-220ENST00000492386 GFRA4Q9GZZ7 299 aa12.8□□□□□ -0.36
SEMA4D-220ENST00000492386 SOX21Q9Y651 276 aaPredicted RBP12.8□□□□□ -0.36
SEMA4D-220ENST00000492386 TRAV8-1A0A0A6YYK1 113 aa12.79□□□□□ -0.36
SEMA4D-220ENST00000492386 C2orf70A6NJV1 201 aa12.79□□□□□ -0.36
SEMA4D-220ENST00000492386 RBP4P02753 201 aa12.79□□□□□ -0.36
SEMA4D-220ENST00000492386 MAJINQ3KP22 176 aa12.79□□□□□ -0.36
SEMA4D-220ENST00000492386 RBM14Q96PK6 669 aaKnown RBP12.79□□□□□ -0.36
SEMA4D-220ENST00000492386 ZZEF1O43149 2961 aa12.79□□□□□ -0.36
SEMA4D-220ENST00000492386 NPIPB6E9PJ23 425 aa12.79□□□□□ -0.36
SEMA4D-220ENST00000492386 IGKV1-17P01599 117 aa12.79□□□□□ -0.36
SEMA4D-220ENST00000492386 Q71RC1 249 aaPredicted RBP12.79□□□□□ -0.36
SEMA4D-220ENST00000492386 EXOC3-AS1Q8N2X6 119 aa12.79□□□□□ -0.36
SEMA4D-220ENST00000492386 DCHS1Q96JQ0 3298 aa12.79□□□□□ -0.36
SEMA4D-220ENST00000492386 HOXB4P17483 251 aaPredicted RBP12.78□□□□□ -0.36
SEMA4D-220ENST00000492386 PMCHL1Q16048 86 aa12.78□□□□□ -0.36
SEMA4D-220ENST00000492386 LDLRAD2Q5SZI1 272 aa12.78□□□□□ -0.36
SEMA4D-220ENST00000492386 RBPMS2Q6ZRY4 209 aaKnown RBP12.78□□□□□ -0.36
SEMA4D-220ENST00000492386 RASL11BQ9BPW5 248 aa12.78□□□□□ -0.36
SEMA4D-220ENST00000492386 DLEU1O43261 78 aa12.78□□□□□ -0.36
SEMA4D-220ENST00000492386 BTF3P20290 206 aaKnown RBP12.78□□□□□ -0.36
SEMA4D-220ENST00000492386 CD24P25063 80 aa12.78□□□□□ -0.36
SEMA4D-220ENST00000492386 CIARTQ8N365 385 aaPredicted RBP12.78□□□□□ -0.36
SEMA4D-220ENST00000492386 KIR3DL3Q8N743 410 aa12.78□□□□□ -0.36
SEMA4D-220ENST00000492386 DAZAP1Q96EP5 407 aaKnown RBP12.78□□□□□ -0.36
SEMA4D-220ENST00000492386 RNF5Q99942 180 aa12.78□□□□□ -0.36
SEMA4D-220ENST00000492386 FOXA3P55318 350 aaPredicted RBP12.77□□□□□ -0.36
SEMA4D-220ENST00000492386 FAM120AOSQ5T036 256 aa12.77□□□□□ -0.36
SEMA4D-220ENST00000492386 Q6ZN92 141 aa12.77□□□□□ -0.36
SEMA4D-220ENST00000492386 VKORC1Q9BQB6 163 aa12.77□□□□□ -0.36
SEMA4D-220ENST00000492386 FAM231BA6NCW3 169 aa12.77□□□□□ -0.37
SEMA4D-220ENST00000492386 K7EIM0 57 aa12.77□□□□□ -0.37
SEMA4D-220ENST00000492386 PLGLAQ15195 96 aa12.77□□□□□ -0.37
SEMA4D-220ENST00000492386 Q56UQ5 140 aa12.77□□□□□ -0.37
SEMA4D-220ENST00000492386 COL5A1-AS1Q5SY13 56 aa12.77□□□□□ -0.37
SEMA4D-220ENST00000492386 C16orf54Q6UWD8 224 aa12.77□□□□□ -0.37
SEMA4D-220ENST00000492386 GOLT1AQ6ZVE7 132 aa12.77□□□□□ -0.37
SEMA4D-220ENST00000492386 SPATA12Q7Z6I5 190 aa12.77□□□□□ -0.37
SEMA4D-220ENST00000492386 MUC15Q8N387 334 aa12.77□□□□□ -0.37
SEMA4D-220ENST00000492386 KLHDC1Q8N7A1 406 aa12.77□□□□□ -0.37
SEMA4D-220ENST00000492386 LINC01560Q8TB33 94 aa12.77□□□□□ -0.37
SEMA4D-220ENST00000492386 TXN2Q99757 166 aa12.77□□□□□ -0.37
SEMA4D-220ENST00000492386 ZNF785A8K8V0 405 aa12.76□□□□□ -0.37
SEMA4D-220ENST00000492386 OVOL3O00110 214 aa12.76□□□□□ -0.37
SEMA4D-220ENST00000492386 GAGE1Q13065 139 aa12.76□□□□□ -0.37
SEMA4D-220ENST00000492386 SRSF8Q9BRL6 282 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-220ENST00000492386 TACC2O95359 2948 aa12.76□□□□□ -0.37
SEMA4D-220ENST00000492386 SH2D7A6NKC9 451 aaPredicted RBP12.76□□□□□ -0.37
SEMA4D-220ENST00000492386 M0QZ24 198 aa12.76□□□□□ -0.37
SEMA4D-220ENST00000492386 TIMM23O14925 209 aa12.76□□□□□ -0.37
SEMA4D-220ENST00000492386 TOX4O94842 621 aa12.76□□□□□ -0.37
SEMA4D-220ENST00000492386 APOHP02749 345 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms