RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 H2AFB2P0C5Z0 115 aa6.71□□□□□ -1.34
HDAC6-232ENST00000489053 OR5G3P0C626 314 aa6.71□□□□□ -1.34
HDAC6-232ENST00000489053 RRAS2P62070 204 aaPredicted RBP6.71□□□□□ -1.34
HDAC6-232ENST00000489053 EBLN2Q6P2I7 272 aa6.71□□□□□ -1.34
HDAC6-232ENST00000489053 THAP8Q8NA92 274 aa6.71□□□□□ -1.34
HDAC6-232ENST00000489053 ZBTB8BQ8NAP8 495 aaPredicted RBP6.71□□□□□ -1.34
HDAC6-232ENST00000489053 C11orf45Q8TAV5 145 aa6.71□□□□□ -1.34
HDAC6-232ENST00000489053 MITD1Q8WV92 249 aa6.71□□□□□ -1.34
HDAC6-232ENST00000489053 SMIM8Q96KF7 97 aa6.71□□□□□ -1.34
HDAC6-232ENST00000489053 GPR82Q96P67 336 aa6.71□□□□□ -1.34
HDAC6-232ENST00000489053 WDR12Q9GZL7 423 aaKnown RBP6.71□□□□□ -1.34
HDAC6-232ENST00000489053 SEPSECSQ9HD40 501 aaKnown RBP6.71□□□□□ -1.34
HDAC6-232ENST00000489053 RNF24Q9Y225 148 aa6.71□□□□□ -1.34
HDAC6-232ENST00000489053 GOSR2O14653 212 aa6.7□□□□□ -1.34
HDAC6-232ENST00000489053 HYPMO75409 117 aa6.7□□□□□ -1.34
HDAC6-232ENST00000489053 METTL15P1P0C7V9 234 aa6.7□□□□□ -1.34
HDAC6-232ENST00000489053 ATF4P18848 351 aaPredicted RBP6.7□□□□□ -1.34
HDAC6-232ENST00000489053 BTCP35070 178 aa6.7□□□□□ -1.34
HDAC6-232ENST00000489053 PSMB3P49720 205 aa6.7□□□□□ -1.34
HDAC6-232ENST00000489053 CAV2P51636 162 aa6.7□□□□□ -1.34
HDAC6-232ENST00000489053 TAS2R30P59541 319 aa6.7□□□□□ -1.34
HDAC6-232ENST00000489053 S100A10P60903 97 aa6.7□□□□□ -1.34
HDAC6-232ENST00000489053 SELENOTP62341 195 aa6.7□□□□□ -1.34
HDAC6-232ENST00000489053 ID3Q02535 119 aa6.7□□□□□ -1.34
HDAC6-232ENST00000489053 FGL1Q08830 312 aa6.7□□□□□ -1.34
HDAC6-232ENST00000489053 RAB31Q13636 194 aa6.7□□□□□ -1.34
HDAC6-232ENST00000489053 LINC00299Q6ZSB3 139 aa6.7□□□□□ -1.34
HDAC6-232ENST00000489053 TMEM144Q7Z5S9 345 aa6.7□□□□□ -1.34
HDAC6-232ENST00000489053 TRPT1Q86TN4 253 aaKnown RBP6.7□□□□□ -1.34
HDAC6-232ENST00000489053 C12orf45Q8N5I9 185 aaPredicted RBP6.7□□□□□ -1.34
HDAC6-232ENST00000489053 OR4D5Q8NGN0 318 aa6.7□□□□□ -1.34
HDAC6-232ENST00000489053 LRRC20Q8TCA0 184 aa6.7□□□□□ -1.34
HDAC6-232ENST00000489053 ZNF431Q8TF32 576 aaPredicted RBP6.7□□□□□ -1.34
HDAC6-232ENST00000489053 SDHCQ99643 169 aaPredicted RBP6.7□□□□□ -1.34
HDAC6-232ENST00000489053 GPN1Q9HCN4 374 aaPredicted RBP6.7□□□□□ -1.34
HDAC6-232ENST00000489053 DOK5Q9P104 306 aa6.7□□□□□ -1.34
HDAC6-232ENST00000489053 TBC1D24Q9ULP9 559 aa6.7□□□□□ -1.34
HDAC6-232ENST00000489053 SLC45A2Q9UMX9 530 aa6.7□□□□□ -1.34
HDAC6-232ENST00000489053 HIGD1AQ9Y241 93 aa6.7□□□□□ -1.34
HDAC6-232ENST00000489053 LSM5Q9Y4Y9 91 aaKnown RBP6.7□□□□□ -1.34
HDAC6-232ENST00000489053 CSMD3Q7Z407 3707 aa6.7□□□□□ -1.34
HDAC6-232ENST00000489053 STARD9Q9P2P6 4700 aa6.69□□□□□ -1.34
HDAC6-232ENST00000489053 IGKV1D-37A0A075B6S9 117 aa6.69□□□□□ -1.34
HDAC6-232ENST00000489053 ISLRO14498 428 aa6.69□□□□□ -1.34
HDAC6-232ENST00000489053 CCSO14618 274 aa6.69□□□□□ -1.34
HDAC6-232ENST00000489053 PLA2G10O15496 165 aa6.69□□□□□ -1.34
HDAC6-232ENST00000489053 TSC22D2O75157 780 aa6.69□□□□□ -1.34
HDAC6-232ENST00000489053 IGKV3-20P01619 116 aa6.69□□□□□ -1.34
HDAC6-232ENST00000489053 LINC00869P0C866 280 aa6.69□□□□□ -1.34
HDAC6-232ENST00000489053 MIFP14174 115 aa6.69□□□□□ -1.34
HDAC6-232ENST00000489053 DLK1P80370 383 aa6.69□□□□□ -1.34
HDAC6-232ENST00000489053 SPATA31B1PQ5VZV4 182 aa6.69□□□□□ -1.34
HDAC6-232ENST00000489053 TEPPQ6URK8 271 aa6.69□□□□□ -1.34
HDAC6-232ENST00000489053 GSG1LQ6UXU4 331 aa6.69□□□□□ -1.34
HDAC6-232ENST00000489053 CYP2G1PQ6ZSU1 146 aa6.69□□□□□ -1.34
HDAC6-232ENST00000489053 ZNF546Q86UE3 836 aa6.69□□□□□ -1.34
HDAC6-232ENST00000489053 STX12Q86Y82 276 aa6.69□□□□□ -1.34
HDAC6-232ENST00000489053 OR4B1Q8NGF8 309 aa6.69□□□□□ -1.34
HDAC6-232ENST00000489053 SEC22CQ9BRL7 303 aa6.69□□□□□ -1.34
HDAC6-232ENST00000489053 RSG1Q9BU20 258 aa6.69□□□□□ -1.34
HDAC6-232ENST00000489053 C11orf68Q9H3H3 251 aaKnown RBP6.69□□□□□ -1.34
HDAC6-232ENST00000489053 NPVFQ9HCQ7 196 aa6.69□□□□□ -1.34
HDAC6-232ENST00000489053 RPRMQ9NS64 109 aa6.69□□□□□ -1.34
HDAC6-232ENST00000489053 PPP1R14DQ9NXH3 145 aa6.69□□□□□ -1.34
HDAC6-232ENST00000489053 CLEC5AQ9NY25 188 aa6.69□□□□□ -1.34
HDAC6-232ENST00000489053 RCL1Q9Y2P8 373 aaKnown RBP6.69□□□□□ -1.34
HDAC6-232ENST00000489053 SACSQ9NZJ4 4579 aa6.68□□□□□ -1.34
HDAC6-232ENST00000489053 ZNF98A6NK75 572 aa6.68□□□□□ -1.34
HDAC6-232ENST00000489053 DEFB4AO15263 64 aa6.68□□□□□ -1.34
HDAC6-232ENST00000489053 HLA-DRB4P13762 266 aa6.68□□□□□ -1.34
HDAC6-232ENST00000489053 RPL7P18124 248 aaKnown RBP6.68□□□□□ -1.34
HDAC6-232ENST00000489053 GATA2P23769 480 aaPredicted RBP6.68□□□□□ -1.34
HDAC6-232ENST00000489053 DEFA1P59665 94 aa6.68□□□□□ -1.34
HDAC6-232ENST00000489053 DEFA3P59666 94 aa6.68□□□□□ -1.34
HDAC6-232ENST00000489053 CEMP1Q6PRD7 247 aaPredicted RBP6.68□□□□□ -1.34
HDAC6-232ENST00000489053 FOXI2Q6ZQN5 318 aa6.68□□□□□ -1.34
HDAC6-232ENST00000489053 PHLDA1Q8WV24 401 aaPredicted RBP6.68□□□□□ -1.34
HDAC6-232ENST00000489053 TMEM208Q9BTX3 173 aa6.68□□□□□ -1.34
HDAC6-232ENST00000489053 ARL6Q9H0F7 186 aa6.68□□□□□ -1.34
HDAC6-232ENST00000489053 XCL2Q9UBD3 114 aa6.68□□□□□ -1.34
HDAC6-232ENST00000489053 HLA-DRB4X5D2U9 266 aa6.68□□□□□ -1.34
HDAC6-232ENST00000489053 IGHV3OR16-12A0A075B7B8 117 aa6.67□□□□□ -1.34
HDAC6-232ENST00000489053 IGKV1OR2-108A0A075B7D4 117 aa6.67□□□□□ -1.34
HDAC6-232ENST00000489053 PRSS46E5RG02 174 aa6.67□□□□□ -1.34
HDAC6-232ENST00000489053 FNDC10F2Z333 226 aa6.67□□□□□ -1.34
HDAC6-232ENST00000489053 COX7A2P2O60397 106 aa6.67□□□□□ -1.34
HDAC6-232ENST00000489053 LY6G6CO95867 125 aa6.67□□□□□ -1.34
HDAC6-232ENST00000489053 MBPP02686 304 aaPredicted RBP6.67□□□□□ -1.34
HDAC6-232ENST00000489053 RLN2P04090 185 aa6.67□□□□□ -1.34
HDAC6-232ENST00000489053 C4BPBP20851 252 aa6.67□□□□□ -1.34
HDAC6-232ENST00000489053 NANOS2P60321 138 aaKnown RBP6.67□□□□□ -1.34
HDAC6-232ENST00000489053 HBG1P69891 147 aa6.67□□□□□ -1.34
HDAC6-232ENST00000489053 HBG2P69892 147 aa6.67□□□□□ -1.34
HDAC6-232ENST00000489053 SLC38A11Q08AI6 406 aa6.67□□□□□ -1.34
HDAC6-232ENST00000489053 ASAH1Q13510 395 aa6.67□□□□□ -1.34
HDAC6-232ENST00000489053 PXDC1Q5TGL8 231 aa6.67□□□□□ -1.34
HDAC6-232ENST00000489053 TMEM14EPQ6UXP3 125 aa6.67□□□□□ -1.34
HDAC6-232ENST00000489053 Q6ZRG5 221 aa6.67□□□□□ -1.34
HDAC6-232ENST00000489053 C2orf50Q96LR7 162 aa6.67□□□□□ -1.34
HDAC6-232ENST00000489053 GGACTQ9BVM4 153 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms