RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 CAMLGP49069 296 aa11.32□□□□□ -0.6
FDPS-213ENST00000489003 RPL11P62913 178 aaKnown RBP11.32□□□□□ -0.6
FDPS-213ENST00000489003 FGL1Q08830 312 aa11.32□□□□□ -0.6
FDPS-213ENST00000489003 RAB31Q13636 194 aa11.32□□□□□ -0.6
FDPS-213ENST00000489003 PATE2Q6UY27 113 aa11.32□□□□□ -0.6
FDPS-213ENST00000489003 Q6ZNX1 250 aa11.32□□□□□ -0.6
FDPS-213ENST00000489003 WFDC3Q8IUB2 231 aa11.32□□□□□ -0.6
FDPS-213ENST00000489003 OR1B1Q8NGR6 318 aa11.32□□□□□ -0.6
FDPS-213ENST00000489003 PFDN2Q9UHV9 154 aa11.32□□□□□ -0.6
FDPS-213ENST00000489003 UBE2L5PA0A1B0GUS4 154 aa11.31□□□□□ -0.6
FDPS-213ENST00000489003 OR4C46A6NHA9 309 aa11.31□□□□□ -0.6
FDPS-213ENST00000489003 A8MZ25 164 aa11.31□□□□□ -0.6
FDPS-213ENST00000489003 OR11H12B2RN74 326 aa11.31□□□□□ -0.6
FDPS-213ENST00000489003 HYPMO75409 117 aa11.31□□□□□ -0.6
FDPS-213ENST00000489003 AP2S1P53680 142 aaPredicted RBP11.31□□□□□ -0.6
FDPS-213ENST00000489003 PAFAH1B2P68402 229 aa11.31□□□□□ -0.6
FDPS-213ENST00000489003 CLINT1Q14677 625 aa11.31□□□□□ -0.6
FDPS-213ENST00000489003 PPP1R14BQ96C90 147 aa11.31□□□□□ -0.6
FDPS-213ENST00000489003 MS4A6AQ9H2W1 248 aa11.31□□□□□ -0.6
FDPS-213ENST00000489003 DOK5Q9P104 306 aa11.31□□□□□ -0.6
FDPS-213ENST00000489003 HELTA6NFD8 242 aa11.3□□□□□ -0.6
FDPS-213ENST00000489003 ZNF98A6NK75 572 aa11.3□□□□□ -0.6
FDPS-213ENST00000489003 DNASE2O00115 360 aaPredicted RBP11.3□□□□□ -0.6
FDPS-213ENST00000489003 OR5G3P0C626 314 aa11.3□□□□□ -0.6
FDPS-213ENST00000489003 IGHV4-30-4P0DP06 118 aa11.3□□□□□ -0.6
FDPS-213ENST00000489003 FGF7P21781 194 aa11.3□□□□□ -0.6
FDPS-213ENST00000489003 NUP62P37198 522 aaPredicted RBP11.3□□□□□ -0.6
FDPS-213ENST00000489003 C1orf194Q5T5A4 169 aa11.3□□□□□ -0.6
FDPS-213ENST00000489003 MIC13Q5XKP0 118 aa11.3□□□□□ -0.6
FDPS-213ENST00000489003 ZNF546Q86UE3 836 aa11.3□□□□□ -0.6
FDPS-213ENST00000489003 DEFB125Q8N687 156 aa11.3□□□□□ -0.6
FDPS-213ENST00000489003 OR2T35Q8NGX2 323 aa11.3□□□□□ -0.6
FDPS-213ENST00000489003 GGTLC1Q9BX51 225 aa11.3□□□□□ -0.6
FDPS-213ENST00000489003 SMIM3Q9BZL3 60 aa11.3□□□□□ -0.6
FDPS-213ENST00000489003 ARL6Q9H0F7 186 aa11.3□□□□□ -0.6
FDPS-213ENST00000489003 WFDC10AQ9H1F0 79 aa11.3□□□□□ -0.6
FDPS-213ENST00000489003 UBQLN2Q9UHD9 624 aa11.3□□□□□ -0.6
FDPS-213ENST00000489003 TRAV2A0A0B4J234 112 aa11.29□□□□□ -0.6
FDPS-213ENST00000489003 G3V3Q6 166 aa11.29□□□□□ -0.6
FDPS-213ENST00000489003 K7EQG2 157 aa11.29□□□□□ -0.6
FDPS-213ENST00000489003 MPDU1O75352 247 aa11.29□□□□□ -0.6
FDPS-213ENST00000489003 RPL29P47914 159 aaKnown RBP11.29□□□□□ -0.6
FDPS-213ENST00000489003 PRR20EP86478 221 aa11.29□□□□□ -0.6
FDPS-213ENST00000489003 PRR20CP86479 221 aa11.29□□□□□ -0.6
FDPS-213ENST00000489003 PRR20DP86480 221 aa11.29□□□□□ -0.6
FDPS-213ENST00000489003 PRR20BP86481 221 aa11.29□□□□□ -0.6
FDPS-213ENST00000489003 PRR20AP86496 221 aa11.29□□□□□ -0.6
FDPS-213ENST00000489003 OPCMLQ14982 345 aa11.29□□□□□ -0.6
FDPS-213ENST00000489003 PXDC1Q5TGL8 231 aa11.29□□□□□ -0.6
FDPS-213ENST00000489003 SIGLEC15Q6ZMC9 328 aa11.29□□□□□ -0.6
FDPS-213ENST00000489003 STXBP6Q8NFX7 210 aa11.29□□□□□ -0.6
FDPS-213ENST00000489003 TMEM37Q8WXS4 190 aa11.29□□□□□ -0.6
FDPS-213ENST00000489003 SLC25A39Q9BZJ4 359 aaPredicted RBP11.29□□□□□ -0.6
FDPS-213ENST00000489003 WFDC1Q9HC57 220 aa11.29□□□□□ -0.6
FDPS-213ENST00000489003 HIGD1AQ9Y241 93 aa11.29□□□□□ -0.6
FDPS-213ENST00000489003 FRMD6-AS1P0C7T7 363 aa11.28□□□□□ -0.6
FDPS-213ENST00000489003 CMC4P56277 68 aaPredicted RBP11.28□□□□□ -0.6
FDPS-213ENST00000489003 ODF3L2Q3SX64 289 aa11.28□□□□□ -0.6
FDPS-213ENST00000489003 Q6ZRG5 221 aa11.28□□□□□ -0.6
FDPS-213ENST00000489003 OR8I2Q8N0Y5 310 aa11.28□□□□□ -0.6
FDPS-213ENST00000489003 DCANP1Q8TF63 244 aa11.28□□□□□ -0.6
FDPS-213ENST00000489003 ATP5SQ99766 215 aa11.28□□□□□ -0.6
FDPS-213ENST00000489003 B9D2Q9BPU9 175 aa11.28□□□□□ -0.6
FDPS-213ENST00000489003 NPCDR1Q9BY65 106 aa11.28□□□□□ -0.6
FDPS-213ENST00000489003 WDR61Q9GZS3 305 aaKnown RBP11.28□□□□□ -0.6
FDPS-213ENST00000489003 ARV1Q9H2C2 271 aa11.28□□□□□ -0.6
FDPS-213ENST00000489003 TUBA4BQ9H853 241 aa11.28□□□□□ -0.6
FDPS-213ENST00000489003 DNAJC4Q9NNZ3 241 aa11.28□□□□□ -0.6
FDPS-213ENST00000489003 H3BRN7 92 aa11.27□□□□□ -0.61
FDPS-213ENST00000489003 S100A7P31151 101 aa11.27□□□□□ -0.61
FDPS-213ENST00000489003 LINC00322Q6ZN03 302 aaPredicted RBP11.27□□□□□ -0.61
FDPS-213ENST00000489003 FAM24BQ8N5W8 94 aa11.27□□□□□ -0.61
FDPS-213ENST00000489003 AQP10Q96PS8 301 aa11.27□□□□□ -0.61
FDPS-213ENST00000489003 UHRF2Q96PU4 802 aa11.27□□□□□ -0.61
FDPS-213ENST00000489003 CITED4Q96RK1 184 aa11.27□□□□□ -0.61
FDPS-213ENST00000489003 FAM110AQ9BQ89 295 aa11.27□□□□□ -0.61
FDPS-213ENST00000489003 SHANK2-AS3Q9BTD1 123 aa11.27□□□□□ -0.61
FDPS-213ENST00000489003 SCRT1Q9BWW7 348 aa11.27□□□□□ -0.61
FDPS-213ENST00000489003 SLC25A32Q9H2D1 315 aa11.27□□□□□ -0.61
FDPS-213ENST00000489003 SLC25A22Q9H936 323 aa11.27□□□□□ -0.61
FDPS-213ENST00000489003 SLC39A9Q9NUM3 307 aa11.27□□□□□ -0.61
FDPS-213ENST00000489003 FBXL17Q9UF56 701 aa11.27□□□□□ -0.61
FDPS-213ENST00000489003 PXMP4Q9Y6I8 212 aa11.27□□□□□ -0.61
FDPS-213ENST00000489003 RBMY1BA6NDE4 496 aaKnown RBP11.26□□□□□ -0.61
FDPS-213ENST00000489003 RBMY1EA6NEQ0 496 aaKnown RBP11.26□□□□□ -0.61
FDPS-213ENST00000489003 SMLR1H3BR10 107 aa11.26□□□□□ -0.61
FDPS-213ENST00000489003 RBMY1DP0C7P1 496 aaKnown RBP11.26□□□□□ -0.61
FDPS-213ENST00000489003 B2MP61769 119 aa11.26□□□□□ -0.61
FDPS-213ENST00000489003 LEMD1Q68G75 181 aa11.26□□□□□ -0.61
FDPS-213ENST00000489003 SBSPONQ8IVN8 264 aa11.26□□□□□ -0.61
FDPS-213ENST00000489003 C17orf77Q96MU5 243 aa11.26□□□□□ -0.61
FDPS-213ENST00000489003 ASCL2Q99929 193 aa11.26□□□□□ -0.61
FDPS-213ENST00000489003 SRD5A3Q9H8P0 318 aa11.26□□□□□ -0.61
FDPS-213ENST00000489003 MAP6D1Q9H9H5 199 aa11.26□□□□□ -0.61
FDPS-213ENST00000489003 NRN1Q9NPD7 142 aa11.26□□□□□ -0.61
FDPS-213ENST00000489003 TNFSF18Q9UNG2 199 aa11.26□□□□□ -0.61
FDPS-213ENST00000489003 ELOA3CA0A087WX78 387 aaPredicted RBP11.25□□□□□ -0.61
FDPS-213ENST00000489003 FXYD6-FXYD2A0A087WZ82 144 aa11.25□□□□□ -0.61
FDPS-213ENST00000489003 COX7A2P2O60397 106 aa11.25□□□□□ -0.61
FDPS-213ENST00000489003 IFNA5P01569 189 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms