RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 HTR1DP28221 377 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 CEACAM3P40198 252 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 SSTP61278 116 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 PRB3Q04118 309 aaPredicted RBP11.29□□□□□ -0.6
ABCB1-207ENST00000488737 SLAQ13239 276 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 PRR27Q6MZM9 219 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 NEU1Q99519 415 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 RASL11BQ9BPW5 248 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 PRSS22Q9GZN4 317 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 WNT10AQ9GZT5 417 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 DPM3Q9P2X0 92 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 TBL2Q9Y4P3 447 aaKnown RBP11.29□□□□□ -0.6
ABCB1-207ENST00000488737 SOX21Q9Y651 276 aaPredicted RBP11.29□□□□□ -0.6
ABCB1-207ENST00000488737 ADGRG4Q8IZF6 3080 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 A0A1B0GXF2 115 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 HIGD1CA8MV81 97 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 TIMM23O14925 209 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 GRNP28799 593 aaKnown RBP11.29□□□□□ -0.6
ABCB1-207ENST00000488737 CDKN1AP38936 164 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 AMTP48728 403 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 LYZP61626 148 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 KLF5Q13887 457 aaPredicted RBP11.29□□□□□ -0.6
ABCB1-207ENST00000488737 NPBQ8NG41 125 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 RCHY1Q96PM5 261 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 SLC25A39Q9BZJ4 359 aaPredicted RBP11.29□□□□□ -0.6
ABCB1-207ENST00000488737 RPP21Q9H633 154 aaKnown RBP11.29□□□□□ -0.6
ABCB1-207ENST00000488737 NRN1Q9NPD7 142 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 FBXL7Q9UJT9 491 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 RNF24Q9Y225 148 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 TRBV6-1A0A0K0K1D8 114 aa11.28□□□□□ -0.6
ABCB1-207ENST00000488737 C19orf71A6NCJ1 209 aa11.28□□□□□ -0.6
ABCB1-207ENST00000488737 TMEM8BA6NDV4 472 aa11.28□□□□□ -0.6
ABCB1-207ENST00000488737 A8MWL6 223 aa11.28□□□□□ -0.6
ABCB1-207ENST00000488737 NBR2O15453 112 aa11.28□□□□□ -0.6
ABCB1-207ENST00000488737 NDUFA3O95167 84 aa11.28□□□□□ -0.6
ABCB1-207ENST00000488737 CD33P20138 364 aa11.28□□□□□ -0.6
ABCB1-207ENST00000488737 KLRB1Q12918 225 aa11.28□□□□□ -0.6
ABCB1-207ENST00000488737 MMDQ15546 238 aa11.28□□□□□ -0.6
ABCB1-207ENST00000488737 C18orf32Q8TCD1 76 aa11.28□□□□□ -0.6
ABCB1-207ENST00000488737 GFRA4Q9GZZ7 299 aa11.28□□□□□ -0.6
ABCB1-207ENST00000488737 CBLN4Q9NTU7 201 aa11.28□□□□□ -0.6
ABCB1-207ENST00000488737 ATRXP46100 2492 aa11.28□□□□□ -0.6
ABCB1-207ENST00000488737 FAM231BA6NCW3 169 aa11.27□□□□□ -0.6
ABCB1-207ENST00000488737 K7EIM0 57 aa11.27□□□□□ -0.6
ABCB1-207ENST00000488737 CNIH1O95406 144 aa11.27□□□□□ -0.6
ABCB1-207ENST00000488737 IGKV1-17P01599 117 aa11.27□□□□□ -0.6
ABCB1-207ENST00000488737 HOXB4P17483 251 aaPredicted RBP11.27□□□□□ -0.6
ABCB1-207ENST00000488737 CFHR4Q92496 578 aa11.27□□□□□ -0.6
ABCB1-207ENST00000488737 VAMP8Q9BV40 100 aa11.27□□□□□ -0.6
ABCB1-207ENST00000488737 GSX1Q9H4S2 264 aaPredicted RBP11.27□□□□□ -0.6
ABCB1-207ENST00000488737 RPH3ALQ9UNE2 315 aa11.27□□□□□ -0.6
ABCB1-207ENST00000488737 ODF3BA8MYP8 253 aa11.27□□□□□ -0.61
ABCB1-207ENST00000488737 LDLRAD2Q5SZI1 272 aa11.27□□□□□ -0.61
ABCB1-207ENST00000488737 GDF5OSQ5U4N7 250 aa11.27□□□□□ -0.61
ABCB1-207ENST00000488737 LEMD1Q68G75 181 aa11.27□□□□□ -0.61
ABCB1-207ENST00000488737 VN1R17PQ8TDU5 208 aa11.27□□□□□ -0.61
ABCB1-207ENST00000488737 NEU4Q8WWR8 484 aaPredicted RBP11.27□□□□□ -0.61
ABCB1-207ENST00000488737 FAM103A1Q9BTL3 118 aaKnown RBP11.27□□□□□ -0.61
ABCB1-207ENST00000488737 M0R143 59 aa11.26□□□□□ -0.61
ABCB1-207ENST00000488737 P01737 135 aa11.26□□□□□ -0.61
ABCB1-207ENST00000488737 ADORA2A-AS1P86434 159 aa11.26□□□□□ -0.61
ABCB1-207ENST00000488737 C11orf71Q6IPW1 123 aa11.26□□□□□ -0.61
ABCB1-207ENST00000488737 LHFPL4Q7Z7J7 247 aa11.26□□□□□ -0.61
ABCB1-207ENST00000488737 Q86TA4 180 aa11.26□□□□□ -0.61
ABCB1-207ENST00000488737 Q8N976 141 aa11.26□□□□□ -0.61
ABCB1-207ENST00000488737 OR4B1Q8NGF8 309 aa11.26□□□□□ -0.61
ABCB1-207ENST00000488737 SHANK2-AS3Q9BTD1 123 aa11.26□□□□□ -0.61
ABCB1-207ENST00000488737 LOC105371242A0A075B767 164 aa11.25□□□□□ -0.61
ABCB1-207ENST00000488737 DIRC3C9JPN6 131 aa11.25□□□□□ -0.61
ABCB1-207ENST00000488737 NPIPB6E9PJ23 425 aa11.25□□□□□ -0.61
ABCB1-207ENST00000488737 H3BRN7 92 aa11.25□□□□□ -0.61
ABCB1-207ENST00000488737 EREGO14944 169 aa11.25□□□□□ -0.61
ABCB1-207ENST00000488737 RAB4AP20338 218 aa11.25□□□□□ -0.61
ABCB1-207ENST00000488737 PMCHP20382 165 aa11.25□□□□□ -0.61
ABCB1-207ENST00000488737 PRTN3P24158 256 aa11.25□□□□□ -0.61
ABCB1-207ENST00000488737 KRTDAPP60985 99 aa11.25□□□□□ -0.61
ABCB1-207ENST00000488737 HBBP68871 147 aa11.25□□□□□ -0.61
ABCB1-207ENST00000488737 ASPHD1Q5U4P2 390 aa11.25□□□□□ -0.61
ABCB1-207ENST00000488737 NIT1Q86X76 327 aa11.25□□□□□ -0.61
ABCB1-207ENST00000488737 LYPD1Q8N2G4 141 aa11.25□□□□□ -0.61
ABCB1-207ENST00000488737 DAZAP1Q96EP5 407 aaKnown RBP11.25□□□□□ -0.61
ABCB1-207ENST00000488737 MIEN1Q9BRT3 115 aa11.25□□□□□ -0.61
ABCB1-207ENST00000488737 USP24Q9UPU5 2620 aa11.25□□□□□ -0.61
ABCB1-207ENST00000488737 ARF6P62330 175 aa11.25□□□□□ -0.61
ABCB1-207ENST00000488737 FAM162BQ5T6X4 162 aa11.25□□□□□ -0.61
ABCB1-207ENST00000488737 C1orf122Q6ZSJ8 110 aa11.25□□□□□ -0.61
ABCB1-207ENST00000488737 S100A7AQ86SG5 101 aa11.25□□□□□ -0.61
ABCB1-207ENST00000488737 BPIFA4PQ86YQ2 179 aa11.25□□□□□ -0.61
ABCB1-207ENST00000488737 ZNF48Q96MX3 618 aaPredicted RBP11.25□□□□□ -0.61
ABCB1-207ENST00000488737 ALKBH7Q9BT30 221 aaPredicted RBP11.25□□□□□ -0.61
ABCB1-207ENST00000488737 SNHG12Q9BXW3 62 aa11.25□□□□□ -0.61
ABCB1-207ENST00000488737 RNF114Q9Y508 228 aa11.25□□□□□ -0.61
ABCB1-207ENST00000488737 KALRNO60229 2985 aa11.25□□□□□ -0.61
ABCB1-207ENST00000488737 SPTA1P02549 2419 aa11.24□□□□□ -0.61
ABCB1-207ENST00000488737 TRAV30A0A087WSZ9 112 aa11.24□□□□□ -0.61
ABCB1-207ENST00000488737 VWC2LB2RUY7 222 aa11.24□□□□□ -0.61
ABCB1-207ENST00000488737 M0QZK8 103 aa11.24□□□□□ -0.61
ABCB1-207ENST00000488737 GPR6P46095 362 aaPredicted RBP11.24□□□□□ -0.61
ABCB1-207ENST00000488737 C5orf64Q2M2E5 130 aa11.24□□□□□ -0.61
ABCB1-207ENST00000488737 LINC00322Q6ZN03 302 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 342 ms