RNA–Protein interactions for RNA: ENST00000487673.5

PTK7-215, Transcript of protein tyrosine kinase 7 (inactive), human

TSL 2

Gene PTK7, Length 5,282 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK7-215	ENST00000487673	PSG8	Q9UQ74	426 aa		11.67	□□□□□ -0.54
PTK7-215	ENST00000487673	ZNF503-AS2	A6NEH8	195 aa		11.67	□□□□□ -0.54
PTK7-215	ENST00000487673	GNG5	P63218	68 aa		11.67	□□□□□ -0.54
PTK7-215	ENST00000487673	NSUN5P1	Q3KNT7	163 aa		11.67	□□□□□ -0.54
PTK7-215	ENST00000487673	DMRTA1	Q5VZB9	504 aa		11.67	□□□□□ -0.54
PTK7-215	ENST00000487673	SPRY4	Q9C004	299 aa		11.67	□□□□□ -0.54
PTK7-215	ENST00000487673	VCX2	Q9H322	139 aa		11.67	□□□□□ -0.54
PTK7-215	ENST00000487673	FAM223B	A6NKX1	122 aa		11.66	□□□□□ -0.54
PTK7-215	ENST00000487673	FGF16	O43320	207 aa		11.66	□□□□□ -0.54
PTK7-215	ENST00000487673	FAM223A	Q8IWN6	122 aa		11.66	□□□□□ -0.54
PTK7-215	ENST00000487673	CUL9	Q8IWT3	2517 aa		11.66	□□□□□ -0.54
PTK7-215	ENST00000487673	STAG3L3	P0CL85	134 aa		11.66	□□□□□ -0.54
PTK7-215	ENST00000487673	RSPO1	Q2MKA7	263 aa	Predicted RBP	11.66	□□□□□ -0.54
PTK7-215	ENST00000487673	GLMP	Q8WWB7	406 aa		11.66	□□□□□ -0.54
PTK7-215	ENST00000487673	PRELID3A	Q96N28	172 aa		11.66	□□□□□ -0.54
PTK7-215	ENST00000487673	EP400	Q96L91	3159 aa		11.66	□□□□□ -0.54
PTK7-215	ENST00000487673	IGHV2-70D	A0A0C4DH43	119 aa		11.66	□□□□□ -0.54
PTK7-215	ENST00000487673	IGHV1-69D	A0A0B4J2H0	117 aa		11.65	□□□□□ -0.54
PTK7-215	ENST00000487673		J3QLI3	93 aa		11.65	□□□□□ -0.54
PTK7-215	ENST00000487673	IGHV1-69	P01742	117 aa		11.65	□□□□□ -0.54
PTK7-215	ENST00000487673	GTSCR1	Q86UQ5	136 aa		11.65	□□□□□ -0.54
PTK7-215	ENST00000487673	KIR3DL3	Q8N743	410 aa		11.65	□□□□□ -0.54
PTK7-215	ENST00000487673	KLF17	Q5JT82	389 aa	Predicted RBP	11.65	□□□□□ -0.54
PTK7-215	ENST00000487673	C1orf147	Q96MC9	270 aa	Predicted RBP	11.65	□□□□□ -0.54
PTK7-215	ENST00000487673	ZNF562	Q6V9R5	426 aa		11.65	□□□□□ -0.54
PTK7-215	ENST00000487673	TMEM170A	Q8WVE7	144 aa		11.65	□□□□□ -0.54
PTK7-215	ENST00000487673	FNDC10	F2Z333	226 aa		11.65	□□□□□ -0.55
PTK7-215	ENST00000487673	OSTC	Q9NRP0	149 aa		11.65	□□□□□ -0.55
PTK7-215	ENST00000487673	TRGV2	A0A075B6R0	118 aa		11.64	□□□□□ -0.55
PTK7-215	ENST00000487673	IZUMO1R	A6ND01	250 aa		11.64	□□□□□ -0.55
PTK7-215	ENST00000487673	LOX	P28300	417 aa	Predicted RBP	11.64	□□□□□ -0.55
PTK7-215	ENST00000487673	RPL23	P62829	140 aa	Known RBP	11.64	□□□□□ -0.55
PTK7-215	ENST00000487673	ARL6IP6	Q8N6S5	226 aa		11.64	□□□□□ -0.55
PTK7-215	ENST00000487673	GEMIN7	Q9H840	131 aa	Known RBP	11.64	□□□□□ -0.55
PTK7-215	ENST00000487673		K7EM74	188 aa		11.64	□□□□□ -0.55
PTK7-215	ENST00000487673	WDR86	Q86TI4	376 aa		11.64	□□□□□ -0.55
PTK7-215	ENST00000487673	PIP4P2	Q8N4L2	257 aa		11.64	□□□□□ -0.55
PTK7-215	ENST00000487673	LINC00311	Q8N616	119 aa		11.64	□□□□□ -0.55
PTK7-215	ENST00000487673	IGKV3OR2-268	A0A0C4DH90	116 aa		11.64	□□□□□ -0.55
PTK7-215	ENST00000487673	VSIR	Q9H7M9	311 aa		11.64	□□□□□ -0.55
PTK7-215	ENST00000487673	LHFPL4	Q7Z7J7	247 aa		11.63	□□□□□ -0.55
PTK7-215	ENST00000487673	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	11.63	□□□□□ -0.55
PTK7-215	ENST00000487673	TRAV1-1	A0A0B4J248	108 aa		11.63	□□□□□ -0.55
PTK7-215	ENST00000487673	IGKV1-6	A0A0C4DH72	117 aa		11.63	□□□□□ -0.55
PTK7-215	ENST00000487673	CD7	P09564	240 aa		11.63	□□□□□ -0.55
PTK7-215	ENST00000487673	C9orf139	Q6ZV77	190 aa		11.63	□□□□□ -0.55
PTK7-215	ENST00000487673	TMEM101	Q96IK0	257 aa		11.63	□□□□□ -0.55
PTK7-215	ENST00000487673	KAAG1	Q9UBP8	84 aa		11.63	□□□□□ -0.55
PTK7-215	ENST00000487673		Q96MF0	132 aa		11.63	□□□□□ -0.55
PTK7-215	ENST00000487673	RNF114	Q9Y508	228 aa		11.63	□□□□□ -0.55
PTK7-215	ENST00000487673	C2orf16	Q68DN1	1984 aa		11.63	□□□□□ -0.55
PTK7-215	ENST00000487673	CACNA1A	O00555	2505 aa		11.63	□□□□□ -0.55
PTK7-215	ENST00000487673	TRGV11	A0A075B6L2	103 aa		11.63	□□□□□ -0.55
PTK7-215	ENST00000487673	IGLV3-1	P01715	115 aa		11.63	□□□□□ -0.55
PTK7-215	ENST00000487673	ALKBH7	Q9BT30	221 aa	Predicted RBP	11.63	□□□□□ -0.55
PTK7-215	ENST00000487673	SAP30	O75446	220 aa		11.62	□□□□□ -0.55
PTK7-215	ENST00000487673	RNASE2	P10153	161 aa	Known RBP	11.62	□□□□□ -0.55
PTK7-215	ENST00000487673	ZNF124	Q15973	351 aa		11.62	□□□□□ -0.55
PTK7-215	ENST00000487673	SHANK1	Q9Y566	2161 aa		11.62	□□□□□ -0.55
PTK7-215	ENST00000487673	TRAV5	A0A0B4J249	113 aa		11.62	□□□□□ -0.55
PTK7-215	ENST00000487673	IGKV1-16	P04430	117 aa		11.62	□□□□□ -0.55
PTK7-215	ENST00000487673	EMP1	P54849	157 aa		11.62	□□□□□ -0.55
PTK7-215	ENST00000487673	ANAPC10	Q9UM13	185 aa		11.62	□□□□□ -0.55
PTK7-215	ENST00000487673	SELENOK	Q9Y6D0	94 aa		11.62	□□□□□ -0.55
PTK7-215	ENST00000487673	SRSF4	Q08170	494 aa	Known RBP	11.62	□□□□□ -0.55
PTK7-215	ENST00000487673	C1QL4	Q86Z23	238 aa		11.62	□□□□□ -0.55
PTK7-215	ENST00000487673	KIF26A	Q9ULI4	1882 aa	Predicted RBP	11.62	□□□□□ -0.55
PTK7-215	ENST00000487673	SPG11	Q96JI7	2443 aa		11.62	□□□□□ -0.55
PTK7-215	ENST00000487673	TMEM262	E9PQX1	116 aa		11.62	□□□□□ -0.55
PTK7-215	ENST00000487673	MGST2	Q99735	147 aa		11.62	□□□□□ -0.55
PTK7-215	ENST00000487673	LGALS3	P17931	250 aa	Known RBP	11.61	□□□□□ -0.55
PTK7-215	ENST00000487673	ORMDL3	Q8N138	153 aa		11.61	□□□□□ -0.55
PTK7-215	ENST00000487673	PMS2P5	A8MQ11	134 aa		11.61	□□□□□ -0.55
PTK7-215	ENST00000487673	HIGD1C	A8MV81	97 aa		11.61	□□□□□ -0.55
PTK7-215	ENST00000487673	CIRBP	Q14011	172 aa	Known RBP	11.61	□□□□□ -0.55
PTK7-215	ENST00000487673	ZNRD1	Q9P1U0	126 aa		11.61	□□□□□ -0.55
PTK7-215	ENST00000487673	LAMTOR2	Q9Y2Q5	125 aa		11.61	□□□□□ -0.55
PTK7-215	ENST00000487673	C15orf62	A8K5M9	175 aa		11.61	□□□□□ -0.55
PTK7-215	ENST00000487673	PRB4	P10163	310 aa	Predicted RBP	11.61	□□□□□ -0.55
PTK7-215	ENST00000487673	CACNG7	P62955	275 aa		11.61	□□□□□ -0.55
PTK7-215	ENST00000487673	RNASE7	Q9H1E1	156 aa	Known RBP	11.61	□□□□□ -0.55
PTK7-215	ENST00000487673	PRDM13	Q9H4Q3	707 aa		11.61	□□□□□ -0.55
PTK7-215	ENST00000487673	ATP5L	O75964	103 aa		11.61	□□□□□ -0.55
PTK7-215	ENST00000487673	ATOH7	Q8N100	152 aa		11.61	□□□□□ -0.55
PTK7-215	ENST00000487673	MAPK1IP1L	Q8NDC0	245 aa		11.61	□□□□□ -0.55
PTK7-215	ENST00000487673	IMMP2L	Q96T52	175 aa		11.61	□□□□□ -0.55
PTK7-215	ENST00000487673	SCGB1A1	P11684	91 aa		11.6	□□□□□ -0.55
PTK7-215	ENST00000487673	ZNF414	Q96IQ9	312 aa		11.6	□□□□□ -0.55
PTK7-215	ENST00000487673	DOCK10	Q96BY6	2186 aa		11.6	□□□□□ -0.55
PTK7-215	ENST00000487673	ZNF833P	Q6ZTB9	187 aa		11.6	□□□□□ -0.55
PTK7-215	ENST00000487673	TMEM242	Q9NWH2	141 aa		11.6	□□□□□ -0.55
PTK7-215	ENST00000487673	DENND4C	Q5VZ89	1909 aa		11.6	□□□□□ -0.55
PTK7-215	ENST00000487673	SCRT1	Q9BWW7	348 aa		11.6	□□□□□ -0.55
PTK7-215	ENST00000487673	CYTL1	Q9NRR1	136 aa		11.6	□□□□□ -0.55
PTK7-215	ENST00000487673	PLXND1	Q9Y4D7	1925 aa		11.6	□□□□□ -0.55
PTK7-215	ENST00000487673	TOMM40	O96008	361 aa		11.6	□□□□□ -0.55
PTK7-215	ENST00000487673	CD33	P20138	364 aa		11.6	□□□□□ -0.55
PTK7-215	ENST00000487673	C17orf58	Q2M2W7	97 aa		11.6	□□□□□ -0.55
PTK7-215	ENST00000487673	CR1L	Q2VPA4	569 aa		11.6	□□□□□ -0.55
PTK7-215	ENST00000487673	ZNF329	Q86UD4	541 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms