RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 NUP62P37198 522 aaPredicted RBP11.55□□□□□ -0.56
GABPA-203ENST00000487266 GDF5OSQ5U4N7 250 aa11.55□□□□□ -0.56
GABPA-203ENST00000487266 TMEM14EPQ6UXP3 125 aa11.55□□□□□ -0.56
GABPA-203ENST00000487266 SLC25A32Q9H2D1 315 aa11.55□□□□□ -0.56
GABPA-203ENST00000487266 SLC25A22Q9H936 323 aa11.55□□□□□ -0.56
GABPA-203ENST00000487266 DOK5Q9P104 306 aa11.55□□□□□ -0.56
GABPA-203ENST00000487266 SOCS3O14543 225 aa11.54□□□□□ -0.56
GABPA-203ENST00000487266 ORM2P19652 201 aa11.54□□□□□ -0.56
GABPA-203ENST00000487266 SNRPD3P62318 126 aaKnown RBP11.54□□□□□ -0.56
GABPA-203ENST00000487266 ARL16Q0P5N6 197 aa11.54□□□□□ -0.56
GABPA-203ENST00000487266 ZNF431Q8TF32 576 aaPredicted RBP11.54□□□□□ -0.56
GABPA-203ENST00000487266 H2AFB2P0C5Z0 115 aa11.53□□□□□ -0.56
GABPA-203ENST00000487266 SPP1P10451 314 aa11.53□□□□□ -0.56
GABPA-203ENST00000487266 NANOS2P60321 138 aaKnown RBP11.53□□□□□ -0.56
GABPA-203ENST00000487266 CYP2G1PQ6ZSU1 146 aa11.53□□□□□ -0.56
GABPA-203ENST00000487266 TMEM144Q7Z5S9 345 aa11.53□□□□□ -0.56
GABPA-203ENST00000487266 OR8I2Q8N0Y5 310 aa11.53□□□□□ -0.56
GABPA-203ENST00000487266 BPIFCQ8NFQ6 507 aa11.53□□□□□ -0.56
GABPA-203ENST00000487266 OR1B1Q8NGR6 318 aa11.53□□□□□ -0.56
GABPA-203ENST00000487266 C17orf77Q96MU5 243 aa11.53□□□□□ -0.56
GABPA-203ENST00000487266 LINC00052Q96N35 136 aa11.53□□□□□ -0.56
GABPA-203ENST00000487266 SCRT1Q9BWW7 348 aa11.53□□□□□ -0.56
GABPA-203ENST00000487266 LSM5Q9Y4Y9 91 aaKnown RBP11.53□□□□□ -0.56
GABPA-203ENST00000487266 FAM240BA0A1B0GVZ2 78 aa11.52□□□□□ -0.57
GABPA-203ENST00000487266 C7orf66A4D0T2 115 aa11.52□□□□□ -0.57
GABPA-203ENST00000487266 H3BMM0 161 aa11.52□□□□□ -0.57
GABPA-203ENST00000487266 IGKV3-20P01619 116 aa11.52□□□□□ -0.57
GABPA-203ENST00000487266 SLC38A11Q08AI6 406 aa11.52□□□□□ -0.57
GABPA-203ENST00000487266 C1orf194Q5T5A4 169 aa11.52□□□□□ -0.57
GABPA-203ENST00000487266 MORN3Q6PF18 240 aaPredicted RBP11.52□□□□□ -0.57
GABPA-203ENST00000487266 Q8NAQ8 132 aa11.52□□□□□ -0.57
GABPA-203ENST00000487266 S100ZQ8WXG8 99 aa11.52□□□□□ -0.57
GABPA-203ENST00000487266 C20orf173Q96LM9 149 aa11.52□□□□□ -0.57
GABPA-203ENST00000487266 C11orf68Q9H3H3 251 aaKnown RBP11.52□□□□□ -0.57
GABPA-203ENST00000487266 FBXL17Q9UF56 701 aa11.52□□□□□ -0.57
GABPA-203ENST00000487266 PFDN2Q9UHV9 154 aa11.52□□□□□ -0.57
GABPA-203ENST00000487266 C5orf51A6NDU8 294 aa11.51□□□□□ -0.57
GABPA-203ENST00000487266 ZNF98A6NK75 572 aa11.51□□□□□ -0.57
GABPA-203ENST00000487266 F6UB75 175 aa11.51□□□□□ -0.57
GABPA-203ENST00000487266 K7EPK0 472 aa11.51□□□□□ -0.57
GABPA-203ENST00000487266 TSC22D2O75157 780 aa11.51□□□□□ -0.57
GABPA-203ENST00000487266 IL5P05113 134 aa11.51□□□□□ -0.57
GABPA-203ENST00000487266 LINC00869P0C866 280 aa11.51□□□□□ -0.57
GABPA-203ENST00000487266 HLA-DRB4P13762 266 aa11.51□□□□□ -0.57
GABPA-203ENST00000487266 FXYD7P58549 80 aa11.51□□□□□ -0.57
GABPA-203ENST00000487266 DLK1P80370 383 aa11.51□□□□□ -0.57
GABPA-203ENST00000487266 IFITM3Q01628 133 aa11.51□□□□□ -0.57
GABPA-203ENST00000487266 ASAH1Q13510 395 aa11.51□□□□□ -0.57
GABPA-203ENST00000487266 ZNF846Q147U1 533 aa11.51□□□□□ -0.57
GABPA-203ENST00000487266 LINC00299Q6ZSB3 139 aa11.51□□□□□ -0.57
GABPA-203ENST00000487266 C12orf45Q8N5I9 185 aaPredicted RBP11.51□□□□□ -0.57
GABPA-203ENST00000487266 TMEM217Q8N7C4 229 aa11.51□□□□□ -0.57
GABPA-203ENST00000487266 TMEM147Q9BVK8 224 aa11.51□□□□□ -0.57
GABPA-203ENST00000487266 SEPSECSQ9HD40 501 aaKnown RBP11.51□□□□□ -0.57
GABPA-203ENST00000487266 HLA-DRB4X5D2U9 266 aa11.51□□□□□ -0.57
GABPA-203ENST00000487266 X6R8D5 127 aa11.51□□□□□ -0.57
GABPA-203ENST00000487266 IGHV4-28A0A0C4DH34 117 aa11.5□□□□□ -0.57
GABPA-203ENST00000487266 NUPR2A6NF83 97 aa11.5□□□□□ -0.57
GABPA-203ENST00000487266 JTBO76095 146 aa11.5□□□□□ -0.57
GABPA-203ENST00000487266 CFDP00746 253 aaPredicted RBP11.5□□□□□ -0.57
GABPA-203ENST00000487266 RBMY1A1P0DJD3 496 aaKnown RBP11.5□□□□□ -0.57
GABPA-203ENST00000487266 RBMY1CP0DJD4 496 aa11.5□□□□□ -0.57
GABPA-203ENST00000487266 ATF4P18848 351 aaPredicted RBP11.5□□□□□ -0.57
GABPA-203ENST00000487266 PSMB3P49720 205 aa11.5□□□□□ -0.57
GABPA-203ENST00000487266 RBMY1FQ15415 496 aaKnown RBP11.5□□□□□ -0.57
GABPA-203ENST00000487266 IGFL4Q6B9Z1 124 aa11.5□□□□□ -0.57
GABPA-203ENST00000487266 CEMP1Q6PRD7 247 aaPredicted RBP11.5□□□□□ -0.57
GABPA-203ENST00000487266 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.5□□□□□ -0.57
GABPA-203ENST00000487266 CSNK1G2-AS1Q8NCQ2 148 aa11.5□□□□□ -0.57
GABPA-203ENST00000487266 OR10P1Q8NGE3 313 aa11.5□□□□□ -0.57
GABPA-203ENST00000487266 UHRF2Q96PU4 802 aa11.5□□□□□ -0.57
GABPA-203ENST00000487266 PTTG2Q9NZH5 202 aa11.5□□□□□ -0.57
GABPA-203ENST00000487266 XCL2Q9UBD3 114 aa11.5□□□□□ -0.57
GABPA-203ENST00000487266 H3BRN7 92 aa11.49□□□□□ -0.57
GABPA-203ENST00000487266 UPK1BO75841 260 aa11.49□□□□□ -0.57
GABPA-203ENST00000487266 TAS2R30P59541 319 aa11.49□□□□□ -0.57
GABPA-203ENST00000487266 MZT2BQ6NZ67 158 aa11.49□□□□□ -0.57
GABPA-203ENST00000487266 C11orf45Q8TAV5 145 aa11.49□□□□□ -0.57
GABPA-203ENST00000487266 PHLDA1Q8WV24 401 aaPredicted RBP11.49□□□□□ -0.57
GABPA-203ENST00000487266 RSG1Q9BU20 258 aa11.49□□□□□ -0.57
GABPA-203ENST00000487266 SLC25A39Q9BZJ4 359 aaPredicted RBP11.49□□□□□ -0.57
GABPA-203ENST00000487266 SAV1Q9H4B6 383 aaPredicted RBP11.49□□□□□ -0.57
GABPA-203ENST00000487266 C11orf1Q9H5F2 150 aa11.49□□□□□ -0.57
GABPA-203ENST00000487266 MGAT4CQ9UBM8 478 aa11.49□□□□□ -0.57
GABPA-203ENST00000487266 SLC45A2Q9UMX9 530 aa11.49□□□□□ -0.57
GABPA-203ENST00000487266 EPPK1P58107 5090 aaKnown RBP11.49□□□□□ -0.57
GABPA-203ENST00000487266 ZNF705EA8MWA4 302 aaPredicted RBP11.48□□□□□ -0.57
GABPA-203ENST00000487266 L7N2F9 121 aa11.48□□□□□ -0.57
GABPA-203ENST00000487266 OR5G3P0C626 314 aa11.48□□□□□ -0.57
GABPA-203ENST00000487266 PRB4P10163 310 aaPredicted RBP11.48□□□□□ -0.57
GABPA-203ENST00000487266 ID1P41134 155 aa11.48□□□□□ -0.57
GABPA-203ENST00000487266 GALR1P47211 349 aa11.48□□□□□ -0.57
GABPA-203ENST00000487266 S100A10P60903 97 aa11.48□□□□□ -0.57
GABPA-203ENST00000487266 VAMP2P63027 116 aa11.48□□□□□ -0.57
GABPA-203ENST00000487266 TMEM41BQ5BJD5 291 aa11.48□□□□□ -0.57
GABPA-203ENST00000487266 ENKURQ8TC29 256 aa11.48□□□□□ -0.57
GABPA-203ENST00000487266 C16orf92Q96LL3 132 aa11.48□□□□□ -0.57
GABPA-203ENST00000487266 SHANK2-AS3Q9BTD1 123 aa11.48□□□□□ -0.57
GABPA-203ENST00000487266 HIGD1AQ9Y241 93 aa11.48□□□□□ -0.57
GABPA-203ENST00000487266 ELOA3CA0A087WX78 387 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms